prot_H-paniculata_contig1128.818.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1128.818.1
Unique Nameprot_H-paniculata_contig1128.818.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length258
Homology
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 1.790e-106
Identity = 189/267 (70.79%), Postives = 211/267 (79.03%), Query Frame = 0
Query:    1 MRAVSSLVSLSALASSSAFVTPG-YVVRGARG----CATLRSLYRGQHASS--SFAAVRRSAMVRISTARMMSDTTTPVASEAETEVEEALA---GELTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITSSLPGSIS 257
            MRAVSSLVSLSALA+SSAFV PG   +R + G       LR L R +  SS    AA+RR   VR  T  MMSD        A TE E A A   GELTELARLEIR+GKI+EI+RHP+ADSLYVEK+D+G+GEEEGPRTIVSGLVNFCEESDLLG+DVVVLCNLKPVNMKGV SAGM+LCSS+EDH+KVEPLC P GVP GELVTF+GH  SPV+AGNRAGKAWK+ SKTL V++ + A FTGEKLPATFMTSKGPITS LPGSIS
Sbjct:    1 MRAVSSLVSLSALATSSAFVAPGGNAIRASTGKTNAAMALRCLSRARLTSSVRPQAALRRPTAVR--TMMMMSDA-------AVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSEEAKFTGEKLPATFMTSKGPITSPLPGSIS 258          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 240 bits (612), Expect = 3.590e-76
Identity = 147/248 (59.27%), Postives = 173/248 (69.76%), Query Frame = 0
Query:   10 LSALASSSAFVTPGYVVRGARGCATLRSLYRGQHASSSFAAVRRSAMVRISTARMMSDTTTPVASEAETEVEEALAGELTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITSSLPGSIS 257
            LSALA +SAF  P  V R A   A  RS Y  QH  +   +V +   +++ST     +     A  A      A  G+LTELARLE+RVG+I+EI RHP+AD LYVEKID+GE    GPRTIVSGLV +C E+DLL +DVV+L NLKPVNM+GV SAGMVLCSS+ DHT+V PL  P G P GELVTFEGH  +PVEAGNRA KAWKKV+KT+ V ED VA FT E LPA F TSKG +TS LPG+IS
Sbjct:   10 LSALAGASAFA-PAAVSRAAM--ARGRSCYHVQHHLAR--SVNKGWAMQMSTEASTEEGAAAAAEPA------APVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIGEPA--GPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGVARFTDEALPAAFATSKGVVTSPLPGNIS 244          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.220e-60
Identity = 112/178 (62.92%), Postives = 137/178 (76.97%), Query Frame = 0
Query:   80 VEEALAGELTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITSSLPGSIS 257
            V EA  GELTEL+RLEIR GKILEISRHPEAD LYVEKID+GE +  GPRTIVSGLV +  E +LLG++VVVL NLKP  +KG+ S GM+LC+S+EDHT V+PL  P GV  GEL+TFEGH  +P   GNRAGKA+ +V++ L   ED +AT+ G  +P  FMTSKGP+T+ + GSIS
Sbjct:  189 VVEAPKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEAD--GPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMIATYKG--IP--FMTSKGPVTTGMAGSIS 360          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.250e-57
Identity = 104/171 (60.82%), Postives = 125/171 (73.10%), Query Frame = 0
Query:   87 ELTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITSSLPGSIS 257
            ELTEL+RLEIRVGKI+E+ RHPEAD LYVEKID+GE    GPRTIVSGLV FC    LL  +V+VLCNLKP  +KG+ S GMVLC++S+D TKV+PL  P   P G+L+TFEGH   PVE GNRA KA+ K++    VNE  VAT+ G  +P  F T  GP+TS+L G IS
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLGEPT--GPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGVATYNG--IP--FSTPNGPVTSTLIGKIS 215          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 188 bits (477), Expect = 6.840e-56
Identity = 104/159 (65.41%), Postives = 121/159 (76.10%), Query Frame = 0
Query:   94 LEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITSSL 252
            LEIRVGKILEI +HPEADSLYVEK+D+GE    GPRTIVSGLV FC    LL +DVVVLCNLKP   KG+ S GM+LCSS++   KVEPL  PAGVPAGELV+FEGH   P E GNRA KA+ KVS   VV++  +AT+ G  +P  FMTSKGPITS++
Sbjct:   77 LEIRVGKILEIGKHPEADSLYVEKVDLGESS--GPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGIATYKG--IP--FMTSKGPITSTI 229          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.490e-52
Identity = 98/170 (57.65%), Postives = 124/170 (72.94%), Query Frame = 0
Query:   81 EEALAGELTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITS 250
            E A  GE+TEL+RLEIRVGKILE++ HP  + ++VEKIDVGE E   PRTI SGL ++ +E DLL KD +VLCNLKP ++ GV S GMVLC+S  +HT V+ +  PAGV AGELVTF+GH  +PV+AGNRA KA+KKV+     ++   A FTGE   ++F TS GP TS
Sbjct:   66 EVAPVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVGEDE---PRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDSGAAVFTGEPA-SSFQTSSGPCTS 231          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 1.610e-50
Identity = 95/160 (59.38%), Postives = 118/160 (73.75%), Query Frame = 0
Query:   88 LTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGP 247
            LTEL+RLEIRVGKI+E  +HP+AD+LYVEK+DVGE E   PRTIVSGLV +     ++G+ VVVLCNLKP  M+GV S GM+LC+S+EDHT V+PLC+P   P GELVTFEGH  +P++  NRA KA+ +V+  L  NE  VA F  E +P  F TS GP
Sbjct:  115 LTELSRLEIRVGKIIECEKHPDADTLYVEKVDVGEEE---PRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEAGVAMF--EDVP--FSTSAGP 267          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 1.650e-50
Identity = 95/172 (55.23%), Postives = 121/172 (70.35%), Query Frame = 0
Query:   88 LTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITS--SLPGSIS 257
            LTEL+RLEIRVGK++E  RHP+AD+LYVEK+DVGE E   PRTIVSGLVNF  + +L G+ V+VLCNLKP  M+G+ S GM+LC+S+EDHTKV+PL +P     G L+TFEGH  +P++AGNRA KA+ KV+     + D +A F        FMT  G   S   L GS+S
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVGEDE---PRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDADGIARFNATP----FMTEAGACYSPAKLQGSVS 232          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.420e-50
Identity = 102/187 (54.55%), Postives = 130/187 (69.52%), Query Frame = 0
Query:   71 PVASEAETEVEEALAGELTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITSSLPGSIS 257
            PV ++A+ E   A AGEL E +RLEIRVGKI+++S HP+AD LYVEKID GE E   PRTIVSGLV + +  DLL + VVVL NLKP  M+G+ S GM+LC+S+EDH++V PL  P     GEL+T EG    P+E  NRA KA+ KV+K L VN+D  ATF G+     F+T  GP TS++ G+IS
Sbjct:   67 PVDTDAKEEAA-APAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCGEDE---PRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVNDDLQATFDGKP----FLTPNGPCTSTMKGAIS 245          
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 173 bits (438), Expect = 9.650e-50
Identity = 92/160 (57.50%), Postives = 120/160 (75.00%), Query Frame = 0
Query:   88 LTELARLEIRVGKILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVVVLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGHARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGP 247
            LTEL+RLEIRVGKI++  +HPEADSLYVE++DVG+  E G R IVSGLV+F    +++ + V+VLCNLKP NM+G+ S GM+LC+S+EDH++V+PL +P GVP G LVTFEGH   P  AGNRA KA+ KV+K+L  +   VA F  E++P  F T  GP
Sbjct:   92 LTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVGD--ESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDATGVAMF--EQVP--FATPSGP 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1128.818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI1.790e-10670.79Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA3.590e-7659.27Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA1.220e-6062.92Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S0XDL6_9STRA3.250e-5760.82Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3M138_9STRA6.840e-5665.41Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S2R5F0_9STRA4.490e-5257.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V3IUX7_9FLOR1.610e-5059.38Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S0ZE83_9RHOD1.650e-5055.23Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S2V4I0_9STRA2.420e-5054.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5J4Z2W6_PORPP9.650e-5057.50Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 87..255
e-value: 7.5E-50
score: 170.9
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 51..254
NoneNo IPR availablePANTHERPTHR11586:SF39NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEINcoord: 51..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.654
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 96..193
e-value: 4.6E-29
score: 100.4
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 90..196
score: 30.529
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 91..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1128contigH-paniculata_contig1128:3905..8549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1128.818.1mRNA_H-paniculata_contig1128.818.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1128 2790..8627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1128.818.1 ID=prot_H-paniculata_contig1128.818.1|Name=mRNA_H-paniculata_contig1128.818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MRAVSSLVSLSALASSSAFVTPGYVVRGARGCATLRSLYRGQHASSSFAA
VRRSAMVRISTARMMSDTTTPVASEAETEVEEALAGELTELARLEIRVGK
ILEISRHPEADSLYVEKIDVGEGEEEGPRTIVSGLVNFCEESDLLGKDVV
VLCNLKPVNMKGVLSAGMVLCSSSEDHTKVEPLCSPAGVPAGELVTFEGH
ARSPVEAGNRAGKAWKKVSKTLVVNEDKVATFTGEKLPATFMTSKGPITS
SLPGSIS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold