prot_H-paniculata_contig30177.8184.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30177.8184.1
Unique Nameprot_H-paniculata_contig30177.8184.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.540e-20
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    2 AREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMVE 55
            AR EDES GYVMS YVMIR+ARK PS+RD LEGCGNPLP LVQQHAEDI+ +VE
Sbjct:  533 ARAEDESYGYVMSAYVMIRVARKCPSSRDDLEGCGNPLPRLVQQHAEDILEIVE 586          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A836CIH7_9STRA (Protein in complex with Mn, Zn, and Amp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH7_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.580e-11
Identity = 28/54 (51.85%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMV 54
            +AREEDES GYVMS Y+M+R+AR  P++ D L  C  PLP LVQQ ++++++++
Sbjct:  294 LAREEDESPGYVMSAYLMLRLARAAPASHDALVRCAAPLPPLVQQRSDEVIALL 347          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A816G701_9BILA (Hypothetical protein (Fragment) n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A816G701_9BILA)

HSP 1 Score: 60.1 bits (144), Expect = 2.200e-10
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMVE 55
            +AR EDES GYV+  Y+++RI+  LP T + +  C NP P+LV+Q+  DI  +V+
Sbjct:   38 LARTEDESTGYVLPNYMLLRISEMLPKTAEDIRACCNPTPILVRQNLHDIYQIVQ 92          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A8I6S4W1_CIMLE (HRDC domain-containing protein n=2 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6S4W1_CIMLE)

HSP 1 Score: 56.6 bits (135), Expect = 6.210e-8
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 AREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMV 54
            AREEDES GYV+S ++M+++A+ LP     +  C NP+P LV+QHA DI  ++
Sbjct:  474 AREEDESPGYVLSNHMMMQMAQTLPREVQGILACCNPIPPLVRQHAVDIHKII 526          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A8I6S2B5_CIMLE (HRDC domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6S2B5_CIMLE)

HSP 1 Score: 56.6 bits (135), Expect = 6.220e-8
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 AREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMV 54
            AREEDES GYV+S ++M+++A+ LP     +  C NP+P LV+QHA DI  ++
Sbjct:  474 AREEDESPGYVLSNHMMMQMAQTLPREVQGILACCNPIPPLVRQHAVDIHKII 526          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A2U9BYW9_SCOMX (Putative exosome component 10 n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A2U9BYW9_SCOMX)

HSP 1 Score: 54.3 bits (129), Expect = 4.060e-7
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMVE 55
            +AR+EDES GYV+  ++MI+I+ +LP     +  C NP+P LV+Q   ++ S+V+
Sbjct:  522 LARQEDESTGYVLPTHMMIKISEELPREPQGIIACCNPVPPLVRQQINELHSLVQ 576          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A8D3DC91_SCOMX (Exosome component 10 n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3DC91_SCOMX)

HSP 1 Score: 54.3 bits (129), Expect = 4.070e-7
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMVE 55
            +AR+EDES GYV+  ++MI+I+ +LP     +  C NP+P LV+Q   ++ S+V+
Sbjct:  512 LARQEDESTGYVLPTHMMIKISEELPREPQGIIACCNPVPPLVRQQINELHSLVQ 566          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A8D3DQY0_SCOMX (Exosome component 10 n=3 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3DQY0_SCOMX)

HSP 1 Score: 54.3 bits (129), Expect = 4.070e-7
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMVE 55
            +AR+EDES GYV+  ++MI+I+ +LP     +  C NP+P LV+Q   ++ S+V+
Sbjct:  516 LARQEDESTGYVLPTHMMIKISEELPREPQGIIACCNPVPPLVRQQINELHSLVQ 570          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: A0A6A4SZD7_SCOMX (HRDC domain-containing protein n=7 Tax=Carangaria TaxID=1489904 RepID=A0A6A4SZD7_SCOMX)

HSP 1 Score: 54.3 bits (129), Expect = 4.070e-7
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMVE 55
            +AR+EDES GYV+  ++MI+I+ +LP     +  C NP+P LV+Q   ++ S+V+
Sbjct:  522 LARQEDESTGYVLPTHMMIKISEELPREPQGIIACCNPVPPLVRQQINELHSLVQ 576          
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Match: UPI001899C31E (exosome component 10 n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001899C31E)

HSP 1 Score: 53.9 bits (128), Expect = 5.570e-7
Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDIMSMVE 55
            +AR+EDES+GYV+  ++MI+I+ +LP     +  C NP+P LV+Q   ++  +V+
Sbjct:  520 LARQEDESIGYVLPTHMMIKISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQ 574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30177.8184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE8_ECTSI1.540e-2079.63HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CIH7_9STRA4.580e-1151.85Protein in complex with Mn, Zn, and Amp n=1 Tax=Tr... [more]
A0A816G701_9BILA2.200e-1045.45Hypothetical protein (Fragment) n=1 Tax=Didymodact... [more]
A0A8I6S4W1_CIMLE6.210e-849.06HRDC domain-containing protein n=2 Tax=Cimex lectu... [more]
A0A8I6S2B5_CIMLE6.220e-849.06HRDC domain-containing protein n=1 Tax=Cimex lectu... [more]
A0A2U9BYW9_SCOMX4.060e-741.82Putative exosome component 10 n=1 Tax=Scophthalmus... [more]
A0A8D3DC91_SCOMX4.070e-741.82Exosome component 10 n=1 Tax=Scophthalmus maximus ... [more]
A0A8D3DQY0_SCOMX4.070e-741.82Exosome component 10 n=3 Tax=Scophthalmus maximus ... [more]
A0A6A4SZD7_SCOMX4.070e-741.82HRDC domain-containing protein n=7 Tax=Carangaria ... [more]
UPI001899C31E5.570e-740.00exosome component 10 n=1 Tax=Nematolebias whitei T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.80coord: 1..55
e-value: 2.4E-13
score: 51.8
IPR002121HRDC domainPFAMPF00570HRDCcoord: 1..54
e-value: 2.5E-8
score: 33.8
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 1..55
score: 12.461
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30177contigH-paniculata_contig30177:1977..2141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30177.8184.1mRNA_H-paniculata_contig30177.8184.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30177 1968..2141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30177.8184.1 ID=prot_H-paniculata_contig30177.8184.1|Name=mRNA_H-paniculata_contig30177.8184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
MAREEDESLGYVMSVYVMIRIARKLPSTRDHLEGCGNPLPVLVQQHAEDI
MSMVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR010997HRDC-like_sf