prot_H-paniculata_contig30177.8183.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30177.8183.1
Unique Nameprot_H-paniculata_contig30177.8183.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.370e-26
Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0
Query:   15 DRLRGDLERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQG-NGVAEEFGEVSRRVMAALWEWR 85
            D L  DLERSGGDVAVKAVLDASREICLRR+EKP F E+GW+ VL+RQG NGV ++FG+V RRV++ALW WR
Sbjct:  458 DMLLIDLERSGGDVAVKAVLDASREICLRRFEKPAFQEKGWSEVLKRQGGNGVLDDFGDVPRRVLSALWSWR 529          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: A0A836CIH7_9STRA (Protein in complex with Mn, Zn, and Amp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.720e-19
Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    1 RYAQSDTHYLLHIYDRLRGDLERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR 85
            +YAQ+DTHYLLH+YDRLR  L   G   A+  VL++SRE+CL+RYEK  F   GW  VL+R G   A       +  MAALW+WR
Sbjct:  210 KYAQADTHYLLHVYDRLRAML---GTPEAIAQVLESSRELCLQRYEKEAFDPEGWRRVLQRIGGEGAGALDSAQQARMAALWDWR 291          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: A0A7S1KUD1_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KUD1_9EUKA)

HSP 1 Score: 70.9 bits (172), Expect = 2.130e-12
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    2 YAQSDTHYLLHIYDRLRGDL-ERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR 85
            YA++DTH+LL+IYDRLR D+ ++  G   + +VL+ SR+IC+RRYEK V+ E  +  + R+   G+ EE   + R     L++WR
Sbjct:  416 YARADTHFLLYIYDRLRNDIFDQKNGKEGLISVLEKSRQICMRRYEKFVYDESSYLYLRRKFPQGITEEEDNILRE----LFKWR 496          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: A0A7R9U4W7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4W7_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.580e-11
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 RYAQSDTHYLLHIYDRLRGDLERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLR--RQGNGVAEEFG------EVSRRVMAALWEWR 85
            RYA SDT YLL IY +LR +L   G   AV+AVL+AS+E+ LRRYE   F   G+  VL   R   G A +        ++  + +AALW+WR
Sbjct:  108 RYALSDTFYLLDIYAQLRIELHAKGSASAVQAVLEASKEVALRRYEHERFNASGYLGVLSKIRPPAGSAPKSPSDRLDWDLQEKCLAALWDWR 200          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: T1K578_TETUR (HRDC domain-containing protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1K578_TETUR)

HSP 1 Score: 66.6 bits (161), Expect = 6.510e-11
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    2 YAQSDTHYLLHIYDRLRGDL-ERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRR 61
            YA+ DTHYLL+IYD +R +L ++      +K V DASRE+CL++YEKP+F   G+  +L+R
Sbjct:  392 YAREDTHYLLYIYDTMRKELLDKDPSGKLIKQVFDASREVCLKKYEKPLFKPEGFNMILKR 452          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: A0A7S1XR06_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR06_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 6.610e-11
Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    2 YAQSDTHYLLHIYDRLRGDLERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR 85
            YA + TH+LL  YDR+R +L   G   AV++V++AS+E+ LRRYE   F   G+  +L++          +   R ++ALW+WR
Sbjct:  352 YAAACTHHLLFAYDRMREELHARGSASAVQSVMEASKEVALRRYEHERFNPHGYKPLLKKLPAPATPAEKDWQERSLSALWDWR 435          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: A0A4W4GXN1_ELEEL (Exosome component 10 n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4GXN1_ELEEL)

HSP 1 Score: 66.2 bits (160), Expect = 8.870e-11
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 RYAQSDTHYLLHIYDRLRGDL--ERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR 85
            +YAQ+DTHYLL++YDRLR DL    +G    V+ V   S+++CL++Y KP+F E  +  + R+Q     + F          L+ WR
Sbjct:  430 QYAQADTHYLLYVYDRLRADLFDAANGQPSLVQVVWSKSKDLCLKKYVKPIFTEDSYMELYRKQ----KKSFNSQQLMAFRLLYSWR 512          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: A0A4W4GRF9_ELEEL (Exosome component 10 n=9 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4GRF9_ELEEL)

HSP 1 Score: 66.2 bits (160), Expect = 9.000e-11
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 RYAQSDTHYLLHIYDRLRGDL--ERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR 85
            +YAQ+DTHYLL++YDRLR DL    +G    V+ V   S+++CL++Y KP+F E  +  + R+Q     + F          L+ WR
Sbjct:  427 QYAQADTHYLLYVYDRLRADLFDAANGQPSLVQVVWSKSKDLCLKKYVKPIFTEDSYMELYRKQ----KKSFNSQQLMAFRLLYSWR 509          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: A0A8B9KST4_ASTMX (Exosome component 10 n=6 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9KST4_ASTMX)

HSP 1 Score: 65.9 bits (159), Expect = 1.210e-10
Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    2 YAQSDTHYLLHIYDRLRGDL--ERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR 85
            YAQ+DTHYLL++YDRLR DL    +G    +  V   S+++CL++Y KP+F E  +  + RRQ     + F          L+ WR
Sbjct:  411 YAQADTHYLLYVYDRLRADLCDAANGQSNLIHLVWSKSKDLCLKKYVKPIFTEESYMELYRRQ----KKSFNSQQLAAFRLLYAWR 492          
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Match: UPI001FEEBAED (exosome component 10 isoform X1 n=2 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI001FEEBAED)

HSP 1 Score: 65.9 bits (159), Expect = 1.230e-10
Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 RYAQSDTHYLLHIYDRLRGDL--ERSGGDVAVKAVLDASREICLRRYEKPVFLERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR 85
            +YAQ+DTHYLL++YDRLR DL    +G    ++ V   S+++CL++Y KP+F E  +  + +RQ     + F          L+ WR
Sbjct:  436 QYAQADTHYLLYVYDRLRADLFDATNGQPALIQLVWSKSKDLCLKKYLKPIFTEESYMELYKRQ----KKSFNSQQITAFRLLYAWR 518          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30177.8183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE8_ECTSI1.370e-2673.61HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CIH7_9STRA6.720e-1951.76Protein in complex with Mn, Zn, and Amp n=1 Tax=Tr... [more]
A0A7S1KUD1_9EUKA2.130e-1242.35Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]
A0A7R9U4W7_9STRA2.580e-1144.09Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
T1K578_TETUR6.510e-1149.18HRDC domain-containing protein n=1 Tax=Tetranychus... [more]
A0A7S1XR06_9STRA6.610e-1138.10Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A4W4GXN1_ELEEL8.870e-1137.93Exosome component 10 n=1 Tax=Electrophorus electri... [more]
A0A4W4GRF9_ELEEL9.000e-1137.93Exosome component 10 n=9 Tax=Electrophorus electri... [more]
A0A8B9KST4_ASTMX1.210e-1038.37Exosome component 10 n=6 Tax=Astyanax mexicanus Ta... [more]
UPI001FEEBAED1.230e-1036.78exosome component 10 isoform X1 n=2 Tax=Tachysurus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.500coord: 1..52
e-value: 5.1E-13
score: 50.9
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..85
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30177contigH-paniculata_contig30177:647..904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30177.8183.1mRNA_H-paniculata_contig30177.8183.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30177 647..904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30177.8183.1 ID=prot_H-paniculata_contig30177.8183.1|Name=mRNA_H-paniculata_contig30177.8183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
RYAQSDTHYLLHIYDRLRGDLERSGGDVAVKAVLDASREICLRRYEKPVF
LERGWAAVLRRQGNGVAEEFGEVSRRVMAALWEWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf