mRNA_H-paniculata_contig30169.8181.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 149 bits (377), Expect = 3.310e-38 Identity = 78/197 (39.59%), Postives = 125/197 (63.45%), Query Frame = 1
Query: 4 REAKESHEWEHWKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
++A+ES EW +W++ E+E + G WE ++ +VG+ ++ +K + GKV +YK RLVAQGF Q+ GV YT+ YSP+ ++RA +A +A KD E+R D + A+L+ +++EE+++E PEGF G V +L +YGL QAGR WN K +T +GF ++ ADPC++ DG++ ++ V VD I+
Sbjct: 859 KQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDII 1054
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 147 bits (370), Expect = 2.810e-37 Identity = 77/186 (41.40%), Postives = 122/186 (65.59%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
WKA +E+H V +++K+ RP ++ V+ + ++K K DG++EKYK RLVA+GF QVEG+ + E ++P++ AS+R LLA AA D E+ D + AFL+ D+DEE+Y+++P GF+ + KLNKA+YGL QAGR W K + A+GF + +D +F K DG + +++ ++VD +L
Sbjct: 618 WKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDML 802
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A6H5KY81_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY81_9PHAE) HSP 1 Score: 142 bits (357), Expect = 8.340e-37 Identity = 72/187 (38.50%), Postives = 116/187 (62.03%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIAR-PMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
W A +KE+ GR G + K+ P + +G+E ++ K ++ G + +K R+VA+GF Q+ G+ + S ASI+ ++A A K +L H+D +QA++ A ++EE+Y+ PEG G V K+ +A+YGL Q+GR W ++ D + G+EQ R DPC+FRKV+DGEV ++V++VD IL
Sbjct: 117 WVAAMKKEIDGRDKTGTFTKVMELPEGRKAIGSEWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPPAASIKTMIAVATEKGKKLDHWDVKQAYIHATLNEEIYLRFPEGHGSMSGKVVKVERALYGLKQSGREWGVEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 303
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 145 bits (366), Expect = 1.010e-36 Identity = 77/186 (41.40%), Postives = 121/186 (65.05%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
WKA +E+H V +++++ RP ++ V+ + ++K K DG++EKYK RLVA+GF QVEG+ + E ++P++ AS+R LLA AA D E+ D + AFL+ D+DEE+Y+++P GF V KLNKA+YGL QAGR W K + A+GF + +D +F K DG + +++ ++VD +L
Sbjct: 941 WKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDML 1125
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D) HSP 1 Score: 139 bits (351), Expect = 1.070e-36 Identity = 79/188 (42.02%), Postives = 116/188 (61.70%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGF--QHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
W+ + EM NGVW + P + +G + +YKRK+ DGKVE YK RLVA+G+ Q +GV Y E +SP++ SIR LLA AA D E+ D + AFL+ +I+E++Y+E P+GF V KL ++IYGL QA R WNI+F + + + GF Q+ +PC+++K G +V++VD IL
Sbjct: 104 WQEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFISSGEDHKVCKLKRSIYGLKQASRSWNIRFNEAVKSFGFIQNMDEPCVYKKD-SGSAVTFLVLYVDDIL 290
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 145 bits (365), Expect = 1.350e-36 Identity = 78/192 (40.62%), Postives = 117/192 (60.94%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQ--HFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVI---DGEVEMVVV-VHVDGIL 594
WK + E + ++NG WE + P DK +VG+ ++K K DG VEK+K RLVAQG+ Q EG+ Y E +SP+ SIR+LLA A D E+ D AFL D+ +E+Y++ PEG++ P V KL K++YGL Q+ RCWN + + G++Q AD C++ K + +G++ V++ +HVD IL
Sbjct: 848 WKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDIL 1039
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 144 bits (363), Expect = 2.520e-36 Identity = 76/183 (41.53%), Postives = 118/183 (64.48%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVD 585
W+ E E+ GV+E++ RP D+ ++G++ ++K K DG+VEKYK RLVAQGF QVEG+ Y E ++P++ + SIR LLA AA D E+ D + AFL+ +++EE+Y+++P G + AV +L KA+YGL QA R W K ++ +GF + +AD C+F K +D ++ V+VD
Sbjct: 1010 WRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRH-PPIIAVYVD 1191
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A4Q3E614_9SPHI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3E614_9SPHI) HSP 1 Score: 137 bits (346), Expect = 1.110e-35 Identity = 82/197 (41.62%), Postives = 123/197 (62.44%), Query Frame = 1
Query: 10 AKESHEWEHWKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGA--VDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
+KES+ W H +EE M+ N VW+ + P +G + ++K K G +E++K RLVA+GF Q EG+ YT+ +SP+S S+R ++A A D EL D + AFL+ D++EEVY++ PEGF G V KLNK+IYGL QA R W +KF D +T+ GFE++ D C+++KV ++ +V++VD IL
Sbjct: 140 SKESNLW-HKAMIEE--MNSMAINQVWDLVELPDGLKAIGCKWVFKTKKDSQGNIERHKARLVAKGFTQREGIDYTDTFSPVSKKDSLRTIMALVAHFDFELHQMDVKTAFLNGDLEEEVYMKQPEGFSSSDGEHLVCKLNKSIYGLKQASRQWYLKFHDVITSFGFEENVMDQCIYQKVSGSKI-CFLVLYVDDIL 332
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A1W7R6C8_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6C8_AEDAL) HSP 1 Score: 142 bits (358), Expect = 1.160e-35 Identity = 79/188 (42.02%), Postives = 116/188 (61.70%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQ--HFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
W++ E EM DNG W+ + P + VG +YK K + GKV KYK RLVAQGF Q G Y E ++P++ ++R LLA A+ K L+HFD + A+L +++EE+Y+ P GF+ V +L ++IYGL Q+ RCWN + + +GFEQS ADPC + KVI+G+ + ++V+VD IL
Sbjct: 762 WRSAMEAEMESHEDNGTWDLVKLPDGRKAVGCRWVYKLKRNAAGKVVKYKARLVAQGFSQKFGQDYDEVFAPVTKQTTLRTLLAVASKKKLILKHFDVKTAYLYGELEEELYMRQPPGFEVNGKEELVCRLRRSIYGLKQSARCWNHRLHSVLRGLGFEQSAADPCFYTKVINGK-RVYLLVYVDDIL 948
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU) HSP 1 Score: 142 bits (358), Expect = 1.190e-35 Identity = 77/186 (41.40%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 37 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 594
WKA +E+ +++++ +P + VVG + ++K K DG +EKYK RLVA+GF QVEG+ YT+ ++P+S ASIR +LA AA D ++ D + AFL+ D+DEE+Y+ P GF H G+V +L K++YGL QA R W K + +GFE+S AD +F KV +G + +++ ++VD +L
Sbjct: 1004 WKAACAEELFAFAKAELYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVI-LIIALYVDDML 1188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30169.8181.1 >prot_H-paniculata_contig30169.8181.1 ID=prot_H-paniculata_contig30169.8181.1|Name=mRNA_H-paniculata_contig30169.8181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp PREAKESHEWEHWKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRback to top mRNA from alignment at H-paniculata_contig30169:2200..2793+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30169.8181.1 ID=mRNA_H-paniculata_contig30169.8181.1|Name=mRNA_H-paniculata_contig30169.8181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=594bp|location=Sequence derived from alignment at H-paniculata_contig30169:2200..2793+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30169:2200..2793+ >mRNA_H-paniculata_contig30169.8181.1 ID=mRNA_H-paniculata_contig30169.8181.1|Name=mRNA_H-paniculata_contig30169.8181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at H-paniculata_contig30169:2200..2793+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |