mRNA_H-paniculata_contig30158.8178.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: A0A820PC48_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820PC48_9BILA) HSP 1 Score: 50.1 bits (118), Expect = 1.400e-6 Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 1
Query: 7 DPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQT 117
D CSP+PCQNGG+C G G+ C C AG G +C+T
Sbjct: 4 DACSPNPCQNGGTCRTVNGNGYQCICAAGTTGTNCET 40
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: UPI0003F08179 (neurogenic locus Notch protein-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08179) HSP 1 Score: 51.2 bits (121), Expect = 2.650e-6 Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 4 TDPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQTST 123
TDPCSP+PC NGG C + G G+ CTC + + G +C+TST
Sbjct: 170 TDPCSPNPCLNGGVCDL-YGSGYSCTCDSAWVGANCETST 208
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: C3YBB9_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YBB9_BRAFL) HSP 1 Score: 51.2 bits (121), Expect = 2.660e-6 Identity = 22/38 (57.89%), Postives = 24/38 (63.16%), Query Frame = 1
Query: 4 TDPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQT 117
TDPC PDPCQNGG C G + C C G+GG CQT
Sbjct: 437 TDPCDPDPCQNGGVCTSS-GDSYTCECVDGWGGPDCQT 473
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: UPI001601992E (uncharacterized protein LOC118409788 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601992E) HSP 1 Score: 51.2 bits (121), Expect = 2.660e-6 Identity = 22/38 (57.89%), Postives = 24/38 (63.16%), Query Frame = 1
Query: 4 TDPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQT 117
TDPC PDPCQNGG C G + C C G+GG CQT
Sbjct: 499 TDPCDPDPCQNGGVCTSS-GDSYTCECVDGWGGPDCQT 535
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: K1PV07_CRAGI (Peptidase inhibitor 16 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1PV07_CRAGI) HSP 1 Score: 49.3 bits (116), Expect = 1.280e-5 Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 4 TDPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQT 117
T+PCS +PC+NGGSC VD G +C CT+G+ G +C+T
Sbjct: 263 TNPCSTNPCKNGGSCSVD-GDKAVCQCTSGWSGSTCET 299
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: A0A821P194_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A821P194_9BILA) HSP 1 Score: 47.4 bits (111), Expect = 1.630e-5 Identity = 18/36 (50.00%), Postives = 21/36 (58.33%), Query Frame = 1
Query: 7 DPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQ 114
DPCS +PC NGG C GG C C +GF G C+
Sbjct: 7 DPCSQNPCMNGGQCYPTNAGGFSCQCPSGFNGQQCE 42
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: UPI001939E87E (uncharacterized protein LOC120337321 isoform X1 n=6 Tax=Styela clava TaxID=7725 RepID=UPI001939E87E) HSP 1 Score: 48.9 bits (115), Expect = 1.740e-5 Identity = 19/39 (48.72%), Postives = 27/39 (69.23%), Query Frame = 1
Query: 4 TDPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQTS 120
TDPCS +PC NGG+C++ + GG+ C C G+ G CQ +
Sbjct: 671 TDPCSKNPCGNGGNCLI-VPGGYQCQCRVGYTGNKCQNA 708
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: A0A0L0FFK1_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FFK1_9EUKA) HSP 1 Score: 48.9 bits (115), Expect = 1.740e-5 Identity = 22/37 (59.46%), Postives = 25/37 (67.57%), Query Frame = 1
Query: 1 VTDPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSC 111
V DPCSP+PC+NGGSC D G G C C GF G +C
Sbjct: 244 VVDPCSPNPCENGGSCSPD-GSGFSCDCGDGFEGPTC 279
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: A0A1M3NHD5_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3NHD5_9DELT) HSP 1 Score: 48.5 bits (114), Expect = 2.390e-5 Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 1
Query: 13 CSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQTS 120
C+P+PCQNGG+C D G H C C GF G +C+T+
Sbjct: 96 CTPNPCQNGGTCDDDANG-HTCKCAPGFSGANCETN 130
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Match: UPI00077AA70C (fibropellin-3-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AA70C) HSP 1 Score: 47.0 bits (110), Expect = 2.860e-5 Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 1
Query: 13 CSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQT 117
CSP+PCQNG +CV +G + C C AG+ G +CQT
Sbjct: 7 CSPNPCQNGATCVNGVGS-YRCNCVAGYTGGTCQT 40 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30158.8178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30158.8178.1 >prot_H-paniculata_contig30158.8178.1 ID=prot_H-paniculata_contig30158.8178.1|Name=mRNA_H-paniculata_contig30158.8178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp VTDPCSPDPCQNGGSCVVDIGGGHMCTCTAGFGGMSCQTSTback to top mRNA from alignment at H-paniculata_contig30158:1917..2039- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30158.8178.1 ID=mRNA_H-paniculata_contig30158.8178.1|Name=mRNA_H-paniculata_contig30158.8178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=123bp|location=Sequence derived from alignment at H-paniculata_contig30158:1917..2039- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30158:1917..2039- >mRNA_H-paniculata_contig30158.8178.1 ID=mRNA_H-paniculata_contig30158.8178.1|Name=mRNA_H-paniculata_contig30158.8178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=246bp|location=Sequence derived from alignment at H-paniculata_contig30158:1917..2039- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |