mRNA_H-paniculata_contig30093.8165.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig30093.8165.1
Unique NamemRNA_H-paniculata_contig30093.8165.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A6H5LB27_9PHAE (Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB27_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.030e-12
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 
Query:    1 SCPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            SCPL+VFVNSKSGGKQGGVLISRFRALLNPLQV
Sbjct:  885 SCPLLVFVNSKSGGKQGGVLISRFRALLNPLQV 917
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: D8LHV0_ECTSI (Diacylglycerol kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV0_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.050e-12
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 
Query:    1 SCPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            SCPL+VFVNSKSGGKQGGVLISRFRALLNPLQV
Sbjct:  147 SCPLLVFVNSKSGGKQGGVLISRFRALLNPLQV 179
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: UPI00083BE092 (diacylglycerol kinase 1 isoform X1 n=2 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083BE092)

HSP 1 Score: 50.1 bits (118), Expect = 5.380e-6
Identity = 20/33 (60.61%), Postives = 28/33 (84.85%), Query Frame = 1 
Query:    1 SCPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            SCPL+VF+N KSGG+QGG ++ +F+ +LNP QV
Sbjct:  548 SCPLLVFINPKSGGRQGGRMLRKFQYILNPRQV 580
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A6P5G578_ANACO (diacylglycerol kinase n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5G578_ANACO)

HSP 1 Score: 50.1 bits (118), Expect = 5.420e-6
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 1 
Query:    1 SCPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            SCP++VF+NSKSGG+ GG LI  +R LLN LQV
Sbjct:   41 SCPVIVFINSKSGGQLGGDLIKTYRELLNKLQV 73
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A1U8KLC3_GOSHI (Diacylglycerol kinase n=23 Tax=Gossypium TaxID=3633 RepID=A0A1U8KLC3_GOSHI)

HSP 1 Score: 50.1 bits (118), Expect = 5.420e-6
Identity = 21/33 (63.64%), Postives = 29/33 (87.88%), Query Frame = 1 
Query:    1 SCPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            SCP++VF+NSKSGG+ GG L+S +R++LNP QV
Sbjct:   42 SCPVLVFINSKSGGQLGGNLLSTYRSVLNPNQV 74
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A817LNX2_9BILA (Diacylglycerol kinase n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817LNX2_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 7.340e-6
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1 
Query:    4 CPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            CPL+VFVN KSGG+QG  LI+ FR LLNP QV
Sbjct: 1022 CPLLVFVNVKSGGQQGAELITNFRHLLNPHQV 1053
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A815C6F1_9BILA (Diacylglycerol kinase n=6 Tax=Rotaria TaxID=231623 RepID=A0A815C6F1_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 7.350e-6
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1 
Query:    4 CPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            CPL+VFVN KSGG+QG  LI+ FR LLNP QV
Sbjct:  773 CPLLVFVNVKSGGQQGAELITNFRHLLNPHQV 804
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A814L410_9BILA (Diacylglycerol kinase n=12 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A814L410_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 7.350e-6
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1 
Query:    4 CPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            CPL+VFVN KSGG+QG  LI+ FR LLNP QV
Sbjct:  759 CPLLVFVNVKSGGQQGAELITNFRHLLNPHQV 790
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A814RFI8_9BILA (Diacylglycerol kinase n=3 Tax=Rotaria TaxID=231623 RepID=A0A814RFI8_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 7.350e-6
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1 
Query:    4 CPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            CPL+VFVN KSGG+QG  LI+ FR LLNP QV
Sbjct:  726 CPLLVFVNVKSGGQQGAELITNFRHLLNPHQV 757
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BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Match: A0A817Q5L7_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817Q5L7_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 7.360e-6
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1 
Query:    4 CPLVVFVNSKSGGKQGGVLISRFRALLNPLQV 99
            CPL+VFVN KSGG+QG  LI+ FR LLNP QV
Sbjct:  724 CPLLVFVNVKSGGQQGAELITNFRHLLNPHQV 755
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30093.8165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB27_9PHAE3.030e-1296.97Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP ... [more]
D8LHV0_ECTSI3.050e-1296.97Diacylglycerol kinase n=1 Tax=Ectocarpus siliculos... [more]
UPI00083BE0925.380e-660.61diacylglycerol kinase 1 isoform X1 n=2 Tax=Nicroph... [more]
A0A6P5G578_ANACO5.420e-666.67diacylglycerol kinase n=2 Tax=Ananas comosus TaxID... [more]
A0A1U8KLC3_GOSHI5.420e-663.64Diacylglycerol kinase n=23 Tax=Gossypium TaxID=363... [more]
A0A817LNX2_9BILA7.340e-671.88Diacylglycerol kinase n=1 Tax=Rotaria sp. Silwood2... [more]
A0A815C6F1_9BILA7.350e-671.88Diacylglycerol kinase n=6 Tax=Rotaria TaxID=231623... [more]
A0A814L410_9BILA7.350e-671.88Diacylglycerol kinase n=12 Tax=Rotaria sp. Silwood... [more]
A0A814RFI8_9BILA7.350e-671.88Diacylglycerol kinase n=3 Tax=Rotaria TaxID=231623... [more]
A0A817Q5L7_9BILA7.360e-671.88Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30093contigH-paniculata_contig30093:1749..1856 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score66.2
Seed ortholog evalue3.5e-09
Seed eggNOG ortholog2880.D8LHV0
KEGG rclassRC00002,RC00017
KEGG koko:K00901
KEGG ReactionR02240
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0004143,GO:0005488,GO:0005509,GO:0006793,GO:0006796,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009611,GO:0009628,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0022622,GO:0032501,GO:0032502,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0048364,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0099402
EggNOG free text desc.protein kinase C-activating G-protein coupled receptor signaling pathway
EggNOG OGsKOG1169@1,KOG1169@2759
EC2.7.1.107
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size108
Cds size108
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929924.0660655-CDS-H-paniculata_contig30093:1748..18561622929924.0660655-CDS-H-paniculata_contig30093:1748..1856Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30093 1749..1856 +
1691481071.6790388-CDS-H-paniculata_contig30093:1748..18561691481071.6790388-CDS-H-paniculata_contig30093:1748..1856Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30093 1749..1856 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30093.8165.1prot_H-paniculata_contig30093.8165.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig30093 1749..1856 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig30093.8165.1

>prot_H-paniculata_contig30093.8165.1 ID=prot_H-paniculata_contig30093.8165.1|Name=mRNA_H-paniculata_contig30093.8165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=36bp
SCPLVVFVNSKSGGKQGGVLISRFRALLNPLQVMVL
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mRNA from alignment at H-paniculata_contig30093:1749..1856+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig30093.8165.1 ID=mRNA_H-paniculata_contig30093.8165.1|Name=mRNA_H-paniculata_contig30093.8165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=108bp|location=Sequence derived from alignment at H-paniculata_contig30093:1749..1856+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCTGCCCGCTCGTGGTCTTCGTGAACTCCAAGTCTGGAGGAAAACAAGG
AGGAGTTCTGATCAGCCGCTTCCGGGCCTTGCTTAACCCGCTACAGGTGA
TGGTTTTG
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Coding sequence (CDS) from alignment at H-paniculata_contig30093:1749..1856+

>mRNA_H-paniculata_contig30093.8165.1 ID=mRNA_H-paniculata_contig30093.8165.1|Name=mRNA_H-paniculata_contig30093.8165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=216bp|location=Sequence derived from alignment at H-paniculata_contig30093:1749..1856+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCTGCCCGCTCGTGGTCTTCGTGAACTCCAAGTCTGGAGGAAAACAAGG
AGGAGTTCTGATCAGCCGCTTCCGGGCCTTGCTTAACCCGCTACAGGTGA
TGGTTTTGAGCTGCCCGCTCGTGGTCTTCGTGAACTCCAAGTCTGGAGGA
AAACAAGGAGGAGTTCTGATCAGCCGCTTCCGGGCCTTGCTTAACCCGCT
ACAGGTGATGGTTTTG
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