prot_H-paniculata_contig3007.8163.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3007.8163.1
Unique Nameprot_H-paniculata_contig3007.8163.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length624
Homology
BLAST of mRNA_H-paniculata_contig3007.8163.1 vs. uniprot
Match: D7FTV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV7_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 1.020e-133
Identity = 300/694 (43.23%), Postives = 362/694 (52.16%), Query Frame = 0
Query:    1 MEHWASLVSPETYMRRDFEYKVSAATSLPEIFFDFWKAVSNVIDEHRSTREDHSLRKLVMFVAPFCEASDLLAHELKDYETMEHVHQLLQQSARDGGCNDFGTDITHVHYHPNYRFKPRPRETWMASCHAPHPSFSIDVLYKWGGLKSLQSMRAAAEAPEAK-----RAAPPRP---RADVPPEGQ--SERALK-KNEEWATLARSSLESLYNTAACYGEEGA---VEDDPWKNSNAVDTNASGRRGVPESSQEILQATQAWLRGVLKDAVECDSS--------------------------------------VATTNIKKRGR-----------------------------------------------------------------------------ATA--------------------------------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVGGAGGQ--SLESAALRALDE-------AVATSSREQEAQDQDSCLEEEEWDFDEDMVLLPGKELVKRMSNIAQYLVVRSRTAEEVYADVWEVVNDMADRAANHGCSIPTEDYSSSSSPCYSAVMVTPDLATYNAESFFRFQEILNRGLKHLPMEHDISVEAFHPETVSESSPMDHHFLRSPYPTLHICYHGLREEGTALHPAV 524
            M  W  +V+ +T+  R+ +Y VS  TSLPE+FFDFWKAVS  ID+HR+T E+ S RK++MFVAPFCE       EL+DYETMEH HQLLQQSA DGGC DFGT ITH HYHPNYR +P+P+++ MAS H+PHP+FSIDV+Y+ GGLKSL S+R ++E  EA+     ++ P R    RAD  PE +  SE A K + EEWA   RSSLE  Y  AA YG E A   V    W + + +       RGVPESS EILQATQ WL  VLKDA   D                                        +A      +GR                                                                             ATA                                T                              XXXXXXXXXXXXXXXX       G +G Q  S+E+  L   +E       AV   + E E Q  D    EE      +  LLPGKELVKRM NI+QY+V RS+TAEE Y+D WEVV +MADRAA+ GC +PTEDY+SSS+PCY A++VTPDLATY++++F RFQE LNRGLKHLPMEHDISVEAFHPE VS++SP+DH F RSP+PTLH+CYHGLREEGTAL+P V
Sbjct:   63 MNEWTKVVTFDTHSSRNTKYIVSEGTSLPEVFFDFWKAVSGAIDQHRATPENRSFRKVLMFVAPFCE-------ELRDYETMEHAHQLLQQSACDGGCQDFGTYITHSHYHPNYRHRPKPKQSRMASRHSPHPAFSIDVVYRKGGLKSLASIRDSSEEAEARQGTRVKSTPARTAPLRADPSPEDRKKSEIARKIRQEEWAAKTRSSLEHAYGMAASYGREEAEHGVGSSMWAHQHVL-----AGRGVPESSVEILQATQEWLTEVLKDAAASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAVMSAGKGRPLYSRTGTGGGLDTERSTSFSPPTAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTASATAVPDAHLSSESGXXXXXXXXXXXXXXXXXPRHHTPSVRFRAATTTVAGGIKQAFAHAAELVTVHXXXXXXXXXXXXXXXXDGGDSDAGASGSQDISVEAQLLETREEDNVNGGVAVEELAAETEGQGGD----EEASGKAAEPPLLPGKELVKRMKNISQYVVARSKTAEEAYSDTWEVVMEMADRAASRGCDVPTEDYTSSSAPCYGALLVTPDLATYSSDTFLRFQETLNRGLKHLPMEHDISVEAFHPEAVSDASPLDHRFTRSPFPTLHVCYHGLREEGTALNPRV 740          
BLAST of mRNA_H-paniculata_contig3007.8163.1 vs. uniprot
Match: A0A6H5KUH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH9_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.360e-75
Identity = 143/264 (54.17%), Postives = 179/264 (67.80%), Query Frame = 0
Query:    1 MEHWASLVSPETYMRRDFEYKVSAATSLPEIFFDFWKAVSNVIDEHRSTREDHSLRKLVMFVAPFCEASDLLAHELKDYETMEHVHQLLQQSARDGGCNDFGTDITHVHYHPNYRFKPRPRETWMASCHAPHPSFSIDVLYKWGGLKSLQSMRAAAEAPEAK-----RAAPPRP---RADVPPEGQ--SERALK-KNEEWATLARSSLESLYNTAACYGEEGAVE---DDPWKNSNAVDTNASGRRGVPESSQEILQATQAWLR 250
            M+ W  +V+ +TY  R+ +Y VS  TSLPE+ FDFWKAVS  ID+HR+T E+ S RK++MFVAPFCE       EL+DYETMEH HQLLQQSA DGGC DFGT ITH H+HPNYR +P+P+++ MAS H+PHP+FSIDV+Y+ GGLKSL S+R ++E  EA+     ++ P R    RAD  PE +  SE A K + EEWA   RSSLE  Y  AA YG E A +      W + + +    +GRR VPESS EILQATQ   R
Sbjct:   63 MKEWTKVVTFDTYSSRNTKYIVSEGTSLPEVLFDFWKAVSGAIDQHRATPENRSFRKVLMFVAPFCE-------ELRDYETMEHTHQLLQQSACDGGCQDFGTYITHSHFHPNYRHRPKPKQSRMASRHSPHPAFSIDVVYRKGGLKSLASIRGSSEEAEARQGTRVKSTPARTAPLRADASPEDRKKSEIARKIRREEWAAKTRSSLEHAYGMAASYGREEAEQGAGSSMWAHQHVL----AGRR-VPESSVEILQATQVGRR 314          
BLAST of mRNA_H-paniculata_contig3007.8163.1 vs. uniprot
Match: A0A6H5KW26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW26_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 5.550e-68
Identity = 110/149 (73.83%), Postives = 132/149 (88.59%), Query Frame = 0
Query:  379 LLPGKELVKRMSNIAQYLVVRSRTAEEVYADVWEVVNDMADRAANHGCSIPTEDYSSSSSPCYSAVMVTPDLATYNAESFFRFQ---EILNRGLKHLPMEHDISVEAFHPETVSESSPMDHHFLRSPYPTLHICYHGLREEGTALHPAV 524
            LLPGKELVKRM NI+QY+V RS+TAEE Y+D WEVV +MADRAA+ GC +PTEDY+SSS+PCY A++VTPD+ATY++++F RFQ   E LNRGLKHLPMEHDISVEAFHPE VS++SP+DH F RSPYPTLH+CYHGLRE+GTAL+P V
Sbjct:  162 LLPGKELVKRMKNISQYIVTRSKTAEEAYSDTWEVVMEMADRAASRGCDVPTEDYTSSSAPCYGALLVTPDIATYSSDTFLRFQAKVETLNRGLKHLPMEHDISVEAFHPEAVSDASPLDHRFTRSPYPTLHVCYHGLREKGTALNPRV 310          
BLAST of mRNA_H-paniculata_contig3007.8163.1 vs. uniprot
Match: A0A836CL24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL24_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.560e-44
Identity = 155/529 (29.30%), Postives = 226/529 (42.72%), Query Frame = 0
Query:    1 MEHW-ASLVSPETYMRRDFEYKVSAATSLPEIFFDFWKAVSNVIDEHRSTREDHSLRKLVMFVAPFCEASDLLAHELKDYETMEHVHQLLQQSARDGGCNDF--GTD---ITHVHYHPNYRFKPRPRETWMASCHAPHPSFSIDVLYKWGGLKSLQSMRAAAEAPEAKRAAPPRPRADVPPEGQSERALKKNEEWATLARSSLESLYNTAACYGEEGAVEDDPWKNSNAVDTNASGRRG---VPESSQEILQATQAWLRGVLKDAVECDSSVATTNIKKRGRATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVGGAGGQSLESAALRALDEAVATSSREQEAQDQDSCLEEEEWDFDEDMVLLPGKELVKRMSNIAQYLVVRSRTAEEVYADVWEVVNDMADRAANHGCSIPTEDYSSSSS----PCYSAVMVTPDLATYNAESFFRFQEILNRGLKHLPMEHDISVEAFHPETVS-ESSPMDHHFLR-SPYPTLHICYHGLR 514
            ME+W +S ++PE + +R   + +S  T+LP +  DFW AV + +D+ R   ED S R+L +  APFCE        L+ Y+TM  + +LL+++A +GGC  F   TD   +T  H HP +R  P P     A  H+P+PSFS+   YK GG          A+A           R  +PP GQ E  L    +      +      + +A  G   A             +   GRRG    P   +E     +  L      A     S +   ++ RG A AT                                                         G     +ALR  D+A +        +    CL+            L    +V+RM ++A Y V RS TAE+++ADVW+ V ++  RAA  GC++P E  ++       PCYSAV+V P+   Y +E F RF EIL   L +LPME +I++E FHPE V+      D   +R SP+P +HIC+ G R
Sbjct:   36 MENWVSSSMAPEGHSKRHLVHMISEGTTLPAVLADFWHAVGSCVDKQRLAPEDRSFRRLHILTAPFCEP-------LRSYKTMAILDRLLERAAAEGGCQHFMPATDHDGVTVYHNHPRFRNTPPPTVKAYAVRHSPYPSFSLAAHYKAGG---------GAQA-----------RWPLPPAGQ-EPPLDSMMQQPLRRLAPRPMQPDRSATAGSNSAXXXXXXXXGTPQRSKPEGRRGKKQAPRPDKEWAPRVRVALESAYAKAAV---SASDDKVEPRGAAPATSVAVLQATMEWVARVLQEAEDVKETSGYEGTSVSRQLR-------------------GAHAHQSALRPDDDACSPPPA-HPVRSLARCLQNRG---------LVSSTVVRRMRSVAAYSVTRSATAEDLFADVWDAVVELTQRAAEAGCAVPQEHEATLDDAGRPPCYSAVVVAPEFDAYCSEGFRRFGEILRSTLDYLPMEDNITIEVFHPEFVTGHDKERDRSAMRRSPWPAIHICFEGAR 504          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3007.8163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTV7_ECTSI1.020e-13343.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUH9_9PHAE2.360e-7554.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW26_9PHAE5.550e-6873.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CL24_9STRA1.560e-4429.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3007contigH-paniculata_contig3007:1984..15868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3007.8163.1mRNA_H-paniculata_contig3007.8163.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3007 449..16704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3007.8163.1 ID=prot_H-paniculata_contig3007.8163.1|Name=mRNA_H-paniculata_contig3007.8163.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=624bp
MEHWASLVSPETYMRRDFEYKVSAATSLPEIFFDFWKAVSNVIDEHRSTR
EDHSLRKLVMFVAPFCEASDLLAHELKDYETMEHVHQLLQQSARDGGCND
FGTDITHVHYHPNYRFKPRPRETWMASCHAPHPSFSIDVLYKWGGLKSLQ
SMRAAAEAPEAKRAAPPRPRADVPPEGQSERALKKNEEWATLARSSLESL
YNTAACYGEEGAVEDDPWKNSNAVDTNASGRRGVPESSQEILQATQAWLR
GVLKDAVECDSSVATTNIKKRGRATATTSPSSSSSSSSSAADVVVVADER
STAFKPPTAAEVTAAIAAANNDDGGSAPGVGGAGGQSLESAALRALDEAV
ATSSREQEAQDQDSCLEEEEWDFDEDMVLLPGKELVKRMSNIAQYLVVRS
RTAEEVYADVWEVVNDMADRAANHGCSIPTEDYSSSSSPCYSAVMVTPDL
ATYNAESFFRFQEILNRGLKHLPMEHDISVEAFHPETVSESSPMDHHFLR
SPYPTLHICYHGLREEGTALHPAVTIKKADVGGGSGSRKNRKKKRNSAAA
KSVAGSSRVSRGGEGQGSRRGRTVVSKGASGGGSGGGGATAMRGGEEETE
TASSSGGSSKQTEETDSKGRRGV*
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