prot_H-paniculata_contig300.8148.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig300.8148.1
Unique Nameprot_H-paniculata_contig300.8148.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length451
Homology
BLAST of mRNA_H-paniculata_contig300.8148.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 5.820e-22
Identity = 95/298 (31.88%), Postives = 123/298 (41.28%), Query Frame = 0
Query:   52 EHDEWKDYSCATPWEYFVNDIDNAIGEFEATKTAAAAAAGGCVSSDNSSISKMGRSDPTSGSGPAHTAGRNNSNSNSGDVGGGNGKRNATDGRSDKSQRRKEVVYNGRTYVLRVM--------RQQQQQRWQPRQVECGN------------FPSLPTIFGEEECALDAMVSALPAGTAADEHD-EATRGKLERDEEEEAARVLRSWFGMGDFLCVHALGSETSSSFSSGSD-GPPLSLEQLLSTAVIAMDGRNCDTVVALQP----------GNTARDSGRYSWRGVGVKGYKTLLP 317
            EHD+WKD+SC T WEYF+ND+  A                                                                 T  RS+K        Y+GR+Y LR +                   ++  G             FP L + FGEEEC+LDA ++  P+ +AA     E    + E  E+ EA  +LRSWFG GD LC+H   ++ +SS  SG   G  LSLEQLLST V+AM+ R C  V+A+Q           G  +RDS   S RGV VKGY TL P
Sbjct:   17 EHDDWKDFSCVTKWEYFINDVAGAAAAI------------------------------------------------------------TTQRRSNKQL----TSYDGRSYCLRSLIAGPNSDNXXXXXXXXSKARMTAGGAATAGDEGDISAFPDLASFFGEEECSLDAWLAPEPSSSAATMSSREEEADEREFLEDVEAWHLLRSWFGFGDLLCLHEAATKPASSSRSGDGAGTGLSLEQLLSTGVMAMEDRRCGAVLAMQQQPGGDGNGRRGRGSRDSA--SRRGVSVKGYATLSP 248          
BLAST of mRNA_H-paniculata_contig300.8148.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.890e-21
Identity = 98/305 (32.13%), Postives = 125/305 (40.98%), Query Frame = 0
Query:   52 EHDEWKDYSCATPWEYFVNDIDNAIGEFEATKTAAAAAAGGCVSSDNSSISKMGRSDPTSGSGPAHTAGRNNSNSNSGDVGGGNGKRNATDGRSDKSQRRKEVVYNGRTYVLRVM--------RQQQQQRWQPRQVECGN------------FPSLPTIFGEEECALDAMVSALPAGTAADEHDEATRGKLERDEEEE-------AARVLRSWFGMGDFLCVHALGSETSSSFSSGSD-GPPLSLEQLLSTAVIAMDGRNCDTVVALQP----------GNTARDSGRYSWRGVGVKGYKTLLPF 318
            EHD+WKD+SC T WEYF+ND+            A AAAA                                                  T  RS K    K   Y+GR+Y LR +                   ++  G             FP L + FGEEEC+LDA ++  P+ ++A      T    E + +E        A  +LRSWFG GD LC+H   +  +SS  SG   G  LSLEQLLST V+AM+ R C  V+A+Q           G  +RDS   S RGV VKGY TL P 
Sbjct:   17 EHDDWKDFSCVTKWEYFINDV------------AGAAAA-------------------------------------------------TTQRRSTK----KLTSYDGRSYCLRRLIAGPNSDNXXXXXXXXXEARISAGGAATAGDEGDISEFPDLASFFGEEECSLDAWLAPEPSSSSA------TMSSREEEADEREFLEDMGAWHLLRSWFGFGDLLCLHEAATNPASSSRSGDGAGTVLSLEQLLSTGVMAMEDRRCGAVLAMQQQPGGDGDGRRGRCSRDSA--SRRGVSVKGYATLSPI 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig300.8148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXM6_ECTSI5.820e-2231.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3A9_9PHAE2.890e-2132.13Rab3 GTPase-activating protein catalytic subunit n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig300contigH-paniculata_contig300:9906..16452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig300.8148.1mRNA_H-paniculata_contig300.8148.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig300 9699..16452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig300.8148.1 ID=prot_H-paniculata_contig300.8148.1|Name=mRNA_H-paniculata_contig300.8148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=451bp
MEDTYEHQDIVTEVLPIIANSTDDKQHYSCEELNAHADDEIAPVENDTVV
GEHDEWKDYSCATPWEYFVNDIDNAIGEFEATKTAAAAAAGGCVSSDNSS
ISKMGRSDPTSGSGPAHTAGRNNSNSNSGDVGGGNGKRNATDGRSDKSQR
RKEVVYNGRTYVLRVMRQQQQQRWQPRQVECGNFPSLPTIFGEEECALDA
MVSALPAGTAADEHDEATRGKLERDEEEEAARVLRSWFGMGDFLCVHALG
SETSSSFSSGSDGPPLSLEQLLSTAVIAMDGRNCDTVVALQPGNTARDSG
RYSWRGVGVKGYKTLLPFPGGGGAVASTRPSVISSGKSNAGKNMEKSRKK
YDGDDDDDDDAGRELNAARSYNNVRSSSSSAGSEVVESKSKSAEELWSWT
ERAETIRMESETSRDLPPNRQCLEAFGDLLVSKASTTWGRERCDGRGGEC
G
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