mRNA_H-paniculata_contig2999.8137.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A6H5L4S8_9PHAE (SpoU_sub_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S8_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 1.650e-130 Identity = 228/362 (62.98%), Postives = 265/362 (73.20%), Query Frame = 1
Query: 226 MSVAFNGGPSGPRLASMVTSFFIARQ-RPMHIVGRVRRLAADGDRSQRRHSLGMASGTWHDRFVDGSGLDSRLGAALWRADGLEQGLNRQLDVTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQRAVAQQGLG 1308
MSVAFN GPS LA M+ +F +R RP R DG G DR + + + S L LWR G LD+TS +N KVKLMRSFHKRRTR++ GK+L EGHRLVCDLIEGGL+P LV+ AL A+PG RLQAALE LSADVVAV+ E+VQRCCDTVT+QGVVALV +P+ PLP T+QT+L+CDGIQDPGNLGTLVRTAAGLGADAVV+TG+CVDYW PKT+R+SMGA+FRLPSLRLE+W EVVELM A G++MYAA+G A LS+ DADWT PSALVVGAEA GL R LE G + GV +PL VESLNAAVAGAIVLGEAQRQR VA++ +G
Sbjct: 1 MSVAFNSGPSAAPLARMIAAFVASRAGRPPSASSR------DG------------RGGIRDRGIRAAAMSS-LPYGLWRDRG------GTLDITSARNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVI----ALRASPGPRLQAALETLSADVVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLEGGVESLNAAVAGAIVLGEAQRQRLVAERHVG 333
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A835Z4A7_9STRA (tRNA/rRNA methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A7_9STRA) HSP 1 Score: 295 bits (754), Expect = 4.000e-90 Identity = 158/278 (56.83%), Postives = 203/278 (73.02%), Query Frame = 1
Query: 451 LWRADGLEQGLNRQLDVTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQR 1284
LWR G LD+TS N ++K + HKR++R+ +G+VLVEG RLV D ++ GLSP+LVLVSPEAL + G L A L+ LS+DVV +++ + V R CDTV+ QGVVA+VA+P+ PLP+T++ LV DG+ DPGN+GT+VRTAA LG DAVV+TG CVD W PK LR+SMGAAFR+PS+ TW E EL+ A G+ +YAA+G A ++ + W+ PSALVVG+EAEGL R L+ G + G+RIPL VESLNAAVAGAIVLGEAQRQR
Sbjct: 9 LWRPPGSGD----LLDITSPTNPRIK---TLHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQR 279
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A8J5X903_DIALT (SpoU_sub_bind domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X903_DIALT) HSP 1 Score: 200 bits (508), Expect = 1.170e-54 Identity = 118/265 (44.53%), Postives = 155/265 (58.49%), Query Frame = 1
Query: 499 VTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTP--LPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLS-YIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQR 1284
+TS +N VK +R RR RE G +L+EG RLV D ++ G E VLV+ L PG LQ L AL A VV+++ + + C TV+ QG+VA V P LPD +LV D + DPGN+GTLVR AAG G DAVV G C D W PK LRS+MG FRLP + + W ++ + G+++ AA+G S Y DW P A+V+G+EA GL R L G V V IP+ A ++SLNAA+AG ++L E RQR
Sbjct: 15 ITSGKNPVVKALRRLESRRHRERDGLLLLEGLRLVTDALDAGFCAETVLVAEALLAQQPG--LQRVLAALPAGVVSLADEAALAAACTTVSPQGIVAAVRMPERTGALPDAASLVLVLDNLSDPGNVGTLVRGAAGFGCDAVVALGACADAWSPKALRSAMGGTFRLPIVPAQEWAQLRAQLQRAGLRVLAADGGVAASDYAAVDWRAPLAVVIGSEATGLSEAVRADLAAGSVCAVGIPMAAGLDSLNAAMAGTVLLSECARQR 277
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A0P6YEI2_9CHLR (SpoU_sub_bind domain-containing protein n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0P6YEI2_9CHLR) HSP 1 Score: 191 bits (484), Expect = 1.110e-51 Identity = 109/262 (41.60%), Postives = 157/262 (59.92%), Query Frame = 1
Query: 499 VTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQR 1284
+TS+ N +VK R+ H+RR RE +GK+L+EG RLV D + G++ E + + + P EAL + VS +E++Q DTVT QG+VA+ +P P + +L+ D ++DPGNLGTL+R AAG G + V++ VD W PK LR+ MGA FRLP TW+E+ + + +G+ +Y A+ + Y D DWT P+ L+VG E EG+G R V IPL +VESLNAA+AG ++L EA+RQR
Sbjct: 4 ITSLANPRVKAARALHRRRMREREGKILLEGARLVHDAFQAGVAFEALFYTSDQAAHIP--------EALRSCAWLVS-EEVMQALSDTVTPQGIVAVAERPQLAWPTSATLLLIADNVRDPGNLGTLLRAAAGAGVEGVLLPKGTVDVWSPKVLRAGMGAHFRLPVRAGLTWEEIAQAV--NGLTVYVADARGAVRYFDVDWTAPTVLIVGGETEGIGEAARALAH----TAVAIPLAREVESLNAAMAGTVILFEARRQR 250
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: R1BHS4_EMIHU (RNA methyltransferase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BHS4_EMIHU) HSP 1 Score: 190 bits (482), Expect = 2.450e-51 Identity = 110/262 (41.98%), Postives = 152/262 (58.02%), Query Frame = 1
Query: 499 VTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQR 1284
+ S N ++KL + H RR RE+ G +L+EG RL+ D ++ GLS + VLVS E L RL L + A++ A +T + + DT T GV+AL KP+ LP + +LVCD I DPGNLGTL+R +A G D ++ C D WGPK LR+ MGA FR+P +++++W + G + AA+ ++ D DW SALVVG+EA G+ + + P D+ESLNAAVAGAIVL EAQRQR
Sbjct: 6 LNSPNNPRLKLAKRLHARRQREKTGLILLEGQRLIADALDAGLSADFVLVSDEQLRDGALDRL---LARVPAEIAASTTAPLFRDVSDTTTPAGVLALFQKPILTLPPSPSLVLVCDSISDPGNLGTLLRASAAAGVDGCLLMAGCADPWGPKALRAGMGAQFRVPMMQVDSWAGAAASLVEWGCAIRAADAGGTSAHYDCDWRDASALVVGSEAHGISREV-----------LADPRAGDLESLNAAVAGAIVLHEAQRQR 253
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: R7QT73_CHOCR (SpoU_sub_bind domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT73_CHOCR) HSP 1 Score: 190 bits (482), Expect = 7.420e-51 Identity = 117/270 (43.33%), Postives = 169/270 (62.59%), Query Frame = 1
Query: 493 LDVTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADV------VAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQR 1284
L++TS +N +KL RS +RR R++ +L+EG RL+ D + +P + S + L R AA+ AL ADV + + I++ C+TV+ QGVVA++ +P PLPD+ LVCD ++DPGN+GTL+R+AAG G DAV++T C D WG K LR+ MGA FRLP ++WDEV++++ G ++ A+G Y DW P+A+VVG EA G G + +G +VVG IPL + +ESLNAAVAG++VL E +RQR
Sbjct: 33 LELTSARNPHLKLARSLLRRRHRDKNNLILLEGQRLIEDALSASFAPHQLFYSDKLL------RRSAAMGALLADVRRSGCAPMLVAEPIMRSLCNTVSPQGVVAVLERPALPLPDSGTLALVCDEVRDPGNVGTLLRSAAGAGVDAVLMTHGCADPWGLKVLRAGMGAHFRLPVQVDQSWDEVMQVVHKWGCEVSVADGGGE-DYAKVDWCGPAAIVVGGEANGPGERAFQEAQG-RVVG--IPLCSGMESLNAAVAGSVVLFEVRRQR 292
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A1X6PKW2_PORUM (SpoU_sub_bind domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKW2_PORUM) HSP 1 Score: 191 bits (484), Expect = 2.020e-50 Identity = 119/278 (42.81%), Postives = 165/278 (59.35%), Query Frame = 1
Query: 469 LEQGLNRQLDVTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEA---LSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQRAVA 1293
L L ++V S +N ++K +R +RR RE +G +L+EGHRLV D + G + V T RL AL ++ D + V+T ++V CDTVT QGVVA+V +P T + +L DG+ DPGN+GTL+R+AA GAD VV+T C D W PK LR+ MGA RLP L +EVV G+++ A+GSA+++Y DW P+ LVVG EAEG + L V V IP++ +VESLNAA+AG++VL EA+RQR+ A
Sbjct: 82 LPDALQDAVEVVSTRNPRIKAVRHLLRRRMREREGLLLLEGHRLVVDAL--GAARPAAPVHTVVATRQAAARLWPALSTATGVARDALLVATPDVVASVCDTVTPQGVVAVVGRPSTTVVPGSTLLLALDGVADPGNVGTLLRSAAAAGADGVVLTKGCADVWSPKALRAGMGAQLRLPVLAGLEPEEVVAWARGRGLRLRVADGSAVMAYDGVDWAAPTVLVVGGEAEGPSAAL---LAAADDV-VAIPMLGEVESLNAAIAGSVVLYEARRQRSEA 353
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A7S0LQQ5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQQ5_9EUKA) HSP 1 Score: 187 bits (475), Expect = 6.600e-50 Identity = 107/263 (40.68%), Postives = 158/263 (60.08%), Query Frame = 1
Query: 499 VTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAAL-EALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQR 1284
++S N ++KL+R +R R++ G +++EGHRL+ D ++ G S + VL+S EAL A G RL +L E L A+ +A++ Q ++ DT T QGVV ++ +P LP++ +LV D I DPGNLGTL+R+AAG G ++ ++ C D WG K LR+ MGA RLP + + + E ++ G AA+ Y DW PSALVVG+EA GL + ++ RIPL VESLNAA+AG++++ E RQR
Sbjct: 33 LSSTSNPRIKLLRKLQAKRARDKSGLMILEGHRLLTDALDAGYSADFVLLSEEALHAPEGARLARSLREVLRAEQLAIAPQSLIAELSDTQTPQGVVGMLQQPRLALPESPSFVLVLDRISDPGNLGTLLRSAAGAGVESALLLSGCTDPWGLKALRAGMGAQLRLPLVEVRGYAEAAGMLRRWGCHGVAADARGETDYWAVDWRQPSALVVGSEAHGLAEEVLSDVD---TQLCRIPLANGVESLNAAIAGSVMMYEVGRQR 292
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A7S2B686_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B686_9EUKA) HSP 1 Score: 185 bits (469), Expect = 9.870e-50 Identity = 114/243 (46.91%), Postives = 147/243 (60.49%), Query Frame = 1
Query: 586 EGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADV------ESLNAAVAGAIVLGEAQRQRAVAQ 1296
EGHRLV D + GL PE V++ AL ++ G RL AL L D V + IV++ DT T QGV+A++A PLP +LVCDGI DPGNLGTL+R+AAG G DAV++ C D WG KTLRS MGA FR+P + TW + +L+ AA+ L++ + DW +AL+VG+EA GL SD R Q+ R+PL + ESLNAAVAG++VL EAQRQR V Q
Sbjct: 1 EGHRLVLDALASGLQPEFVVIHDAALASSIGERLGTALAQLETDRVVRTPAHIVEQLSDTQTPQGVIAVLAHEPLPLPPAPTLVLVCDGISDPGNLGTLLRSAAGSGVDAVLLLPGCSDPWGLKTLRSGMGAQFRVPLQHMGTWADTSDLLADWSCTALAADAGGELAHDEVDWRRGAALIVGSEAHGL-SDAVRADPSVQLC--RVPLAEGLGASECLESLNAAVAGSVVLFEAQRQRRVHQ 240
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Match: A0A838RDZ7_9CHLR (RNA methyltransferase n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RDZ7_9CHLR) HSP 1 Score: 185 bits (469), Expect = 1.540e-49 Identity = 114/268 (42.54%), Postives = 164/268 (61.19%), Query Frame = 1
Query: 499 VTSVQNSKVKLMRSFHKRRTREEQGKVLVEGHRLVCDLIEGGLSPELVLVSPEALTAAPGRRLQAALEALSADVVAVSTQEIVQRCCDTVTAQGVVALVAKPMTPLPDTLQTILVCDGIQDPGNLGTLVRTAAGLGADAVVVTGTCVDYWGPKTLRSSMGAAFRLPSLRLETWDEVVELMTAHGVQMYAAEGSAMLSYIDADWTVPSALVVGAEAEGLGSDTRRGLEGGQVVGVRIPLVADVESLNAAVAGAIVLGEAQRQRAVAQQG 1302
+ S+QNSKVK R+ +RR R+ +GK+ VEG RLV D + G++P+L+ + AL A R+Q+ +EA VS + ++ TVT QGV A+V P P P+ +L+ DG++DPGNLGTL+R+AA G + V+V VD W K LR+ MGA FRLP TWD V+ L+T V++ A+G A+ Y DWT+PSAL++G EA G G R+ + +++ I + VESLNAAVAG++++ EA RQR + G
Sbjct: 2 IESIQNSKVKWARALQRRRERQREGKLFVEGVRLVGDAVATGITPDLLFFTQAALETA---RVQSLVEAHGPVAWEVS-EAVMTEMAGTVTPQGVAAIVPLPALPWPEQPTLLLIADGVRDPGNLGTLLRSAAAAGVEGVIVPRGTVDPWADKVLRAGMGAHFRLPIYEGLTWDAVLSLLTGLTVRLGDAQGDAL--YDQVDWTLPSALIIGGEASGAGEAARQRTD--EII--TISMANAVESLNAAVAGSVMMFEAFRQRRMEPSG 259 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2999.8137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2999.8137.1 >prot_H-paniculata_contig2999.8137.1 ID=prot_H-paniculata_contig2999.8137.1|Name=mRNA_H-paniculata_contig2999.8137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=383bp MSVAFNGGPSGPRLASMVTSFFIARQRPMHIVGRVRRLAADGDRSQRRHSback to top mRNA from alignment at H-paniculata_contig2999:10607..16825+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2999.8137.1 ID=mRNA_H-paniculata_contig2999.8137.1|Name=mRNA_H-paniculata_contig2999.8137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6219bp|location=Sequence derived from alignment at H-paniculata_contig2999:10607..16825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2999:10607..16825+ >mRNA_H-paniculata_contig2999.8137.1 ID=mRNA_H-paniculata_contig2999.8137.1|Name=mRNA_H-paniculata_contig2999.8137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2298bp|location=Sequence derived from alignment at H-paniculata_contig2999:10607..16825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |