prot_H-paniculata_contig2995.8128.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2995.8128.1
Unique Nameprot_H-paniculata_contig2995.8128.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: D7FW88_ECTSI (40S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW88_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.390e-49
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKDEAEL 108
            MQNEAGSNVDLYIPRKCSWTNRLLQAKDH+STQINVGKLDPVSG FTGESDVYALAGYLR RGEADEALTCLVNKKDE+EL
Sbjct:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: A0A1Z5KP36_FISSO (40S ribosomal protein S21 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP36_FISSO)

HSP 1 Score: 117 bits (294), Expect = 1.790e-32
Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKDEA 106
            MQNE+G NVDLY+PRKCS+TNRL+QAKDHA+ QINV  +DPV+GI TG+S+VY LAGY+R + E D ALT LV  KD A
Sbjct:    1 MQNESGQNVDLYVPRKCSYTNRLIQAKDHAAVQINVANVDPVTGIMTGDSNVYCLAGYIRFKSEGDMALTSLVRAKDAA 79          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: B8BZU9_THAPS (40S ribosomal protein S21 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZU9_THAPS)

HSP 1 Score: 117 bits (292), Expect = 3.610e-32
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKDEAEL 108
            MQNE G NVDLYIPRKCSWTNRL++AKDH S QINV  +DPV+G+FTGES  YA+AGY+R + E D A T LV   D+  L
Sbjct:    1 MQNENGENVDLYIPRKCSWTNRLIRAKDHGSVQINVANVDPVTGLFTGESTAYAMAGYIRDKSEGDMAFTALVEANDKKVL 81          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: A0A024TLB5_9STRA (40S ribosomal protein S21 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLB5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.650e-31
Identity = 51/78 (65.38%), Postives = 66/78 (84.62%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKDE 105
            MQN+AG N+D+YIPRKCSWTNR+L AKDHAS QI V K+D  +G++TG++DVYAL+GY+R++GE D ALT LV K +E
Sbjct:    1 MQNDAGQNIDIYIPRKCSWTNRILSAKDHASVQIAVAKVD-ANGVYTGQNDVYALSGYIRAKGEGDHALTDLVRKAEE 77          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: G4ZUD9_PHYSP (40S ribosomal protein S21 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZUD9_PHYSP)

HSP 1 Score: 113 bits (282), Expect = 1.040e-30
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKD 104
            MQNEAG ++D+YIPRKCSWTNR+L AKDHAS QINVG+++  +G+FTGESD YALAGY+R  GE D+A+T L  + D
Sbjct:    1 MQNEAGQSIDIYIPRKCSWTNRILAAKDHASVQINVGRVN-ANGVFTGESDTYALAGYIRHHGEGDQAITELARQTD 76          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: K3WSU9_GLOUD (40S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU9_GLOUD)

HSP 1 Score: 112 bits (280), Expect = 2.100e-30
Identity = 52/77 (67.53%), Postives = 65/77 (84.42%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKD 104
            MQNEAG ++D+YIPRKCSWTNR+L AKDHAS QINV +++  +G+FTGESD +ALAGY+RS+GEAD ALT L  + D
Sbjct:    1 MQNEAGESIDIYIPRKCSWTNRILAAKDHASVQINVARVN-ANGVFTGESDTFALAGYIRSKGEADLALTELARQAD 76          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: A0A7S0FIC7_9STRA (40S ribosomal protein S21 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIC7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.500e-30
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKD 104
            MQNE G NVDLY+PRKCSWTNRLL + DH S QINVG +DPV+G+FTGES  +A++GY+R++ EAD ALT L    D
Sbjct:    1 MQNENGDNVDLYVPRKCSWTNRLLTSGDHGSVQINVGNVDPVTGLFTGESTPFAISGYVRAKSEADMALTALAKAND 77          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: A0A835Z072_9STRA (40S ribosomal protein S21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z072_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.890e-30
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKD-EAEL 108
            MQNE+G +VDLY+PRKCSWTNRLL AKDHAS QINV K+DP +G+ TG  +V+ALAG+LR  G++D AL  L ++KD EA++
Sbjct:    1 MQNESGKDVDLYVPRKCSWTNRLLVAKDHASVQINVAKIDPQTGVATGAHEVFALAGFLRRLGQSDNALAALSSQKDAEAQI 82          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: A0A448Z9N0_9STRA (40S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9N0_9STRA)

HSP 1 Score: 111 bits (278), Expect = 5.030e-30
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   28 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKDEA 106
            MQNEAG NVDLY+PRKC+WTNRL++AKDH+S Q+NV  +DPV+G+ TG++  Y L GY+R   E D ALT LV K D A
Sbjct:    1 MQNEAGENVDLYVPRKCNWTNRLVEAKDHSSVQVNVANVDPVTGLATGDATPYCLVGYIRKISEGDMALTALVEKNDAA 79          
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Match: K0SVE7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE7_THAOC)

HSP 1 Score: 113 bits (283), Expect = 3.850e-29
Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 0
Query:   26 VNMQNEAGSNVDLYIPRKCSWTNRLLQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLVNKKDE 105
            + MQNE G NVDLYIPRKCSWTNRL++AKDH S QINV  +DPV+G++TGE+  Y L+GY+R + E D A T LV + D+
Sbjct:  138 LTMQNENGENVDLYIPRKCSWTNRLIRAKDHGSVQINVANVDPVTGLYTGETTAYCLSGYIRDKSEGDMAFTALVEENDK 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2995.8128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW88_ECTSI1.390e-4995.0640S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID... [more]
A0A1Z5KP36_FISSO1.790e-3268.3540S ribosomal protein S21 n=1 Tax=Fistulifera sola... [more]
B8BZU9_THAPS3.610e-3265.4340S ribosomal protein S21 n=1 Tax=Thalassiosira ps... [more]
A0A024TLB5_9STRA3.650e-3165.3840S ribosomal protein S21 n=3 Tax=Aphanomyces TaxI... [more]
G4ZUD9_PHYSP1.040e-3066.2340S ribosomal protein S21 n=7 Tax=Peronosporaceae ... [more]
K3WSU9_GLOUD2.100e-3067.5340S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID... [more]
A0A7S0FIC7_9STRA2.500e-3064.9440S ribosomal protein S21 n=1 Tax=Minutocellus pol... [more]
A0A835Z072_9STRA4.890e-3063.4140S ribosomal protein S21 n=1 Tax=Tribonema minus ... [more]
A0A448Z9N0_9STRA5.030e-3062.0340S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia... [more]
K0SVE7_THAOC3.850e-2961.25Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 28..107
e-value: 4.2E-32
score: 111.9
IPR001931Ribosomal protein S21ePIRSFPIRSF002148RPS21ecoord: 28..107
e-value: 2.6E-31
score: 105.6
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 28..104
e-value: 1.1E-33
score: 115.2
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 28..103
NoneNo IPR availablePRODOMPD006584coord: 51..107
e-value: 1.0E-9
score: 145.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2995contigH-paniculata_contig2995:13418..17310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2995.8128.1mRNA_H-paniculata_contig2995.8128.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2995 13232..17862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2995.8128.1 ID=prot_H-paniculata_contig2995.8128.1|Name=mRNA_H-paniculata_contig2995.8128.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MVSVVPSLPPSHPPFPVLWSLPEYLVNMQNEAGSNVDLYIPRKCSWTNRL
LQAKDHASTQINVGKLDPVSGIFTGESDVYALAGYLRSRGEADEALTCLV
NKKDEAEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038579Ribosomal_S21e_sf
IPR001931Ribosomal_S21e