prot_H-paniculata_contig299.8119.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig299.8119.1
Unique Nameprot_H-paniculata_contig299.8119.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length962
Homology
BLAST of mRNA_H-paniculata_contig299.8119.1 vs. uniprot
Match: D7FYC3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC3_ECTSI)

HSP 1 Score: 534 bits (1376), Expect = 2.660e-169
Identity = 389/1024 (37.99%), Postives = 523/1024 (51.07%), Query Frame = 0
Query:    8 FVCLRQRAR-STLVGHNNSSTAIVDRLRDCPKYVSIPALSSVFASAGLLWSEEEADYIIRRFADNRRRIDWRRLIRALDVTPPEDFTDPDRSFIDQLPQPYRLVVNVLETDILDRAWAQIVTEHPDLNTNSADKARVPVEIDLKRSCPPGLWLYHPTVDSAAPTQTHEP--GANSEGHRKKSD--LSGVPIAQARFMLGSAAGNANSNSSEAMLPEIIRRGEGFLTALQWDQSGEFLFTGSCDGSVCLRRADAFEHVVDRVDVFSAESC-----------AAVTCLSRPVRSLGGRPAYPTCVRVAAAATESVP-----SPKETIHRSNEDLCTNGGGTGDMVAEIPVTATPLLP---PRSRACILDMVLCERGRRPGTG--------RSDGDVRATET------IPTLRAICYVDL-PRGENVTELS--LSCDGKRLVIASSIGSVALWALPPFSSSPCMNTSRN---YTAEDDLVASDGAAEDIIDNSVGKSDTNRNKRGVHPSLKAAAVATAAV--------------------------------QLGRPEIFIPHLPSPEQRKYNKILADYQRRVDAGEIEKAAENDATEVHLGADSLNLKPKPPSAPLVAYHLACVSLLSNIGMKGKGKPGYGGAEGAGLAIWRSRSNVWRLYRLPEILPGAQIGP--CMSESTNELEVETVKDTGVSGECDGHDPRDDD-LFSTVPITPIVDVACIPSAEWVLPSPVTFSVPCDAGGGVEGGRHNDAGRQ----------ADSPAYPPLVALGTENGGVYVCDGVLGTARKGLSMHRAKVTALTFHRRRFLISGSEDEMIHIHDITLSPATYFGGGGGDIAGRGHWSCTSLRCLHDARGSGIVRVNCLNQTPLMFAEDTSGRIVAYDIIMGTVLGVLCLEGKHQNVVSSSHNPLSAGGGVGLNG-----KQDLTWGAGGDSLAVVSSCSAIEDCEQTTTQKATINRDSRG-MLGIWSAADVIWGLCPRVRELTNHERPALVADIVKLFHELEPAERK 936
            F  LRQR R ++ VG ++       RL D PKYVS+ AL S F  AG++ +E+E  Y++++FADNRRRIDW+RL+ ALDV PP DFTDPDRSF+D LPQPYRL+V+VLET+I+DRAW  +V  HP+L+T+ AD+AR   +IDLKRSC P + L  P     A     +P   A  EG    +D  L G   ++  F      G+A+ +              G ++ +QWD  G+FLFTG  DGSVC+R A A + +   V + S+  C           AAVT LSRPV SLGGR    + VR+AA  T S P     +P +T +R      T      +     P +A  +L    PRSRA        E G  P  G        RS+    A  +       P  R IC V+L    EN T +S  LS DG+RL + ++ G V+ W+LPP S+    + +R+      EDD V              G+        G     + A V  +                                  QLG+PE  IPH+PSPE+  + K L +Y++RV+AGEI++     +T+            KPP    +A+HLA V  +        G+   GG    GLA+WRS SNV RL+RLP  +     G    +    N+  VE  + TG      G +  D   + S   +    D++ +PS EWVLPSP+T    C+      GG   D GR+          AD+PA  PLVA+GTENGGVY+ D  LGT R GLS HRA+VTAL FH +RFL+SGS+DEMI IH +T++  T   G GGD    G      LRCLHDARGSGIVR+ C  + PL  AEDTSGR+V YD++ GT+LGVL L+      V++   P   G G  ++      K  + W  GG+ +AVV         EQ T+  +    DS G  LG+WSA+D++W L P +R +   ERP    D+ +LF+ L P  RK
Sbjct:    5 FAHLRQRFRLASFVGWHS-------RLADGPKYVSLSALKSAFGVAGVVLTEDEVGYLVKKFADNRRRIDWKRLMIALDVGPPADFTDPDRSFLDNLPQPYRLIVSVLETEIVDRAWELVVERHPELDTSPADEARAAADIDLKRSCHPFVRLLDPHSPLPAHAGDVKPVAAAAKEGEAIAADGFLDGRGSSELLFEGKDRNGDADDDGGGG------ENDAGNVSTMQWDNRGQFLFTGGRDGSVCVRLAGAVKDI--GVQIRSSSLCGETFSEGNAKSAAVTFLSRPVGSLGGRS---SSVRIAAVVTSSCPDSGHGNPDQTGNREAGQQETERDAGAEPRPACPSSAVSVLEMTVPRSRAGD------EAGGSPARGSLEHHQGARSEHGADAANSGNRRNYAPAFRVICTVELHSEQENATAVSCTLSPDGRRLAVTTASGRVSTWSLPPVSAPLERHRNRSPQQSAREDDDVDGVQPGSSRTSAGHGRETPKEGMAGQQGGERGAGVGESGAVLAGRDDDXXXXXXXXXXXXXXXXXXXXXXXTQLGQPEFTIPHVPSPEELSHAKALQEYRKRVEAGEIQEPT---STQEXXXXXXXXXXXKPPQLSGLAHHLARVDFIP----AADGRLNGGGGSTGGLAVWRSNSNVCRLFRLPPPVYDGDGGQRQTVEGGNNDGGVELSR-TGTVAASSGFESADKTGIGSEGSLAAKYDISRLPSVEWVLPSPITVLAVCEE---ETGGEAQDDGREKGGGWSCCGGADAPA--PLVAIGTENGGVYLGDAALGTTRAGLSRHRARVTALAFHGKRFLVSGSDDEMIQIHHLTVADPT---GAGGDRRCVG--GTPRLRCLHDARGSGIVRLACFREMPLAVAEDTSGRVVVYDLLSGTMLGVLALKDDAITSVAADR-PDRNGDGAAVSHETVAPKAGIIWSEGGECMAVVM------PQEQETSVLSPTRSDSGGETLGVWSASDLMWELSPGMRAMVGEERPLSPRDVAELFYGLLPRYRK 979          
BLAST of mRNA_H-paniculata_contig299.8119.1 vs. uniprot
Match: A0A2R5GNW0_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNW0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.330e-8
Identity = 51/148 (34.46%), Postives = 75/148 (50.68%), Query Frame = 0
Query:    6 DVFVCLRQRARSTLVGHNNSSTAIVDRLRDCPKYVSIPA--LSSVFASAGLLWSEEEADYIIRRFADNRRRIDWRRLIRALDVTPPEDFTDPDRSFIDQLPQPYRLVVNVLETDILDRAWAQI----------VTEHPDLNTNSADKA 141
            D++  L  +AR +   H  S            K   +PA     V A  GL   E++A+ +  +FAD R  +D+ +  R LDV PPED  DP  +  D+LPQPYR++V +LE  +++ AW QI          VT+   L+ NSA +A
Sbjct:   59 DLWRSLESQARKSSAAHAGS------------KSHKLPAEDFLHVLAQHGLRLQEQDANLV--KFADFRGFVDFVKFYRMLDVLPPEDHVDPSLTR-DRLPQPYRMLVKILEDHVIEAAWEQITLRNMPKSARVTQSQSLSGNSASRA 191          
BLAST of mRNA_H-paniculata_contig299.8119.1 vs. uniprot
Match: A0A7S2RZG0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZG0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.330e-7
Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 0
Query:   51 SAGLLWSEEEADYIIRRFADNRRRIDWRRLIRALDVTPPEDFTDPDRSFIDQLPQPYRLVVNVLETDILDRAWAQIVTEHPDLNTNSAD 139
            S+G+   E +   I   FAD +  +D+R+  R+L +  P D++DP   F D LPQPYR+++ V+E +IL+ AW ++   HP+L     D
Sbjct:   90 SSGIRLQEADCTAITMVFADWQGDVDYRKWWRSLQIAKPSDYSDPALHF-DTLPQPYRMILKVMEQEILEPAWEELCVRHPELRLVKPD 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig299.8119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYC3_ECTSI2.660e-16937.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2R5GNW0_9STRA1.330e-834.46Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S2RZG0_9STRA1.330e-737.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 711..749
e-value: 0.1
score: 21.7
coord: 213..252
e-value: 0.91
score: 17.2
coord: 377..417
e-value: 67.0
score: 5.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 675..838
e-value: 2.1E-7
score: 32.1
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 220..822

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig299contigH-paniculata_contig299:13539..18927 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig299.8119.1mRNA_H-paniculata_contig299.8119.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig299 13427..18927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig299.8119.1 ID=prot_H-paniculata_contig299.8119.1|Name=mRNA_H-paniculata_contig299.8119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=962bp
MPPTEDVFVCLRQRARSTLVGHNNSSTAIVDRLRDCPKYVSIPALSSVFA
SAGLLWSEEEADYIIRRFADNRRRIDWRRLIRALDVTPPEDFTDPDRSFI
DQLPQPYRLVVNVLETDILDRAWAQIVTEHPDLNTNSADKARVPVEIDLK
RSCPPGLWLYHPTVDSAAPTQTHEPGANSEGHRKKSDLSGVPIAQARFML
GSAAGNANSNSSEAMLPEIIRRGEGFLTALQWDQSGEFLFTGSCDGSVCL
RRADAFEHVVDRVDVFSAESCAAVTCLSRPVRSLGGRPAYPTCVRVAAAA
TESVPSPKETIHRSNEDLCTNGGGTGDMVAEIPVTATPLLPPRSRACILD
MVLCERGRRPGTGRSDGDVRATETIPTLRAICYVDLPRGENVTELSLSCD
GKRLVIASSIGSVALWALPPFSSSPCMNTSRNYTAEDDLVASDGAAEDII
DNSVGKSDTNRNKRGVHPSLKAAAVATAAVQLGRPEIFIPHLPSPEQRKY
NKILADYQRRVDAGEIEKAAENDATEVHLGADSLNLKPKPPSAPLVAYHL
ACVSLLSNIGMKGKGKPGYGGAEGAGLAIWRSRSNVWRLYRLPEILPGAQ
IGPCMSESTNELEVETVKDTGVSGECDGHDPRDDDLFSTVPITPIVDVAC
IPSAEWVLPSPVTFSVPCDAGGGVEGGRHNDAGRQADSPAYPPLVALGTE
NGGVYVCDGVLGTARKGLSMHRAKVTALTFHRRRFLISGSEDEMIHIHDI
TLSPATYFGGGGGDIAGRGHWSCTSLRCLHDARGSGIVRVNCLNQTPLMF
AEDTSGRIVAYDIIMGTVLGVLCLEGKHQNVVSSSHNPLSAGGGVGLNGK
QDLTWGAGGDSLAVVSSCSAIEDCEQTTTQKATINRDSRGMLGIWSAADV
IWGLCPRVRELTNHERPALVADIVKLFHELEPAERKGGEAGVGAGSISRT
QERAGTSYPKTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf