mRNA_H-paniculata_contig299.8118.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: D7G0Q0_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q0_ECTSI) HSP 1 Score: 325 bits (833), Expect = 2.080e-105 Identity = 168/193 (87.05%), Postives = 177/193 (91.71%), Query Frame = 1
Query: 331 RFQPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQAS 909
RFQPLLVPPPTLQEDMR+LVNNRELSDV FIVDGFPVYASR+HLALRSEHFRAML+GGMRESE G EIEIKDVSH+VFLKLLEYLYTDTLSDVT +QA++LLVASEQYLL RLKTLCEEAIR SIT++TVCTIFLLAHKHNAEGLK EIALDFVLDNMEGVK T GFLELKQEPDLLMEIIFRQAS
Sbjct: 314 RFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESEKGAEIEIKDVSHAVFLKLLEYLYTDTLSDVTANQAVHLLVASEQYLLARLKTLCEEAIRTSITVDTVCTIFLLAHKHNAEGLK--------EIALDFVLDNMEGVKDTAGFLELKQEPDLLMEIIFRQAS 498
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A835YYB0_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB0_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.200e-77 Identity = 128/189 (67.72%), Postives = 151/189 (79.89%), Query Frame = 1
Query: 337 QPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQ 903
+PLLVPP TL D+R +VN RELSDV F+VDGFPV+ASR HLA RSEHFRAML+GG+RES+AG EIE+KDVSH+VFLK+LEYLYTDT+ D+ PD A+ LL+ASE+YLL RLK LCEE+IRK +T+E V +FL AHKHNAEGLK EI LD++LDN+E VK T F ELK EPDLL EII Q
Sbjct: 331 EPLLVPPSTLAADLRGMVNCRELSDVTFLVDGFPVFASRAHLAARSEHFRAMLYGGLRESQAGCEIEVKDVSHAVFLKMLEYLYTDTVGDLAPDLAVQLLMASERYLLDRLKALCEESIRKGVTVENVVGVFLTAHKHNAEGLK--------EICLDYILDNLEAVKGTQSFNELKSEPDLLFEIIMAQ 511
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A7S2UT53_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT53_9STRA) HSP 1 Score: 241 bits (616), Expect = 2.260e-76 Identity = 124/190 (65.26%), Postives = 153/190 (80.53%), Query Frame = 1
Query: 331 RFQPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFR 900
RF+PL +P PTL D+R L+NNRELSDV FIVDGFPVYASR HLA+RSEHFRAML+GGMRES++ EIEIKDVSH VFLK+LE+LYTDT+ D+ + A+ LL+ASEQYLL RLK LCE++IRKSIT++ V ++F+ AH+H AEGLK EI L+F+LD++E VK + GF LK EPDLLMEII +
Sbjct: 42 RFEPLNIPGPTLINDLRSLINNRELSDVTFIVDGFPVYASRAHLAVRSEHFRAMLYGGMRESQS-EEIEIKDVSHPVFLKMLEFLYTDTVEDIPYEIAVQLLMASEQYLLDRLKALCEDSIRKSITVDNVISVFMAAHRHRAEGLK--------EIGLEFILDHLEDVKMSTGFQLLKAEPDLLMEIIMK 222
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A7S1U372_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U372_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.860e-64 Identity = 113/190 (59.47%), Postives = 143/190 (75.26%), Query Frame = 1
Query: 340 PLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQAS 909
P+ +PP +L D+R L+NN++ SDV FIV G PVYA+R HLA RSEHFRAML+GGMRE+ A EI+I DVSH VFLKLLEYLYTD + +++ + A+ LL+A+EQYLL RLK +CE+ IRKSI E V IF+ AH+HNA+GL+ EI L+F+L N+E VK T GF ELK EP+LLMEII RQ +
Sbjct: 331 PVAIPPSSLVADLRSLINNKDFSDVTFIVGGEPVYATRAHLAARSEHFRAMLYGGMREANA-EEIQIHDVSHDVFLKLLEYLYTDQVEELSAETAVALLIAAEQYLLDRLKGICEDTIRKSIAAENVIGIFMAAHRHNAQGLR--------EIGLEFILANLEEVKRTKGFQELKDEPELLMEIIMRQQN 511
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A7R9UG27_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG27_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.870e-60 Identity = 108/193 (55.96%), Postives = 134/193 (69.43%), Query Frame = 1
Query: 331 RFQPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQAS 909
RFQ L + P +MR LVNN+ SDV FIVDG P+YA+R HLA R EHFRAML+G MRE+ + EI I D+ H FLKLLEYLYTD + D+T + A LL+A+EQYLL RLK +CE IR+SIT+E V IF+ AH+HNA L+ EI L+++L N+E VK T F ELK EP+LLMEII RQ +
Sbjct: 55 RFQHLSIAPSAFLSEMRSLVNNQMFSDVTFIVDGIPIYATRAHLAARCEHFRAMLYGEMREASS-EEIVIHDIRHDTFLKLLEYLYTDQVEDLTAESATPLLIAAEQYLLERLKGICEGIIRQSITVENVIGIFMAAHRHNALRLR--------EIVLEYILANLEDVKRTRHFQELKDEPELLMEIIMRQQT 238
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A7S2WPN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPN5_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.070e-59 Identity = 120/292 (41.10%), Postives = 161/292 (55.14%), Query Frame = 1
Query: 55 EIPGMG-AVPTPRYFHSCAIHNGSMYVFGGYNGSDRL------CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFQPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQAS 909
+IP +G +VP+PRYFH+CA++ +YVFGGYNG++RL R +P+ +P T DMR LVNNRELSDV F+V+G VYASRIHLA RSEHFRAMLFGGMRES +G EIE+ +SH+VF+K+LE+LYTDT++D+ PD A+ LL+A+EQYLL RLK LCE+ IR+ +++ F+L+++E +K P FL+LK EP+LLMEI+ S
Sbjct: 246 QIPCLGDSVPSPRYFHACAMYRNKIYVFGGYNGTERLNDLFSYSFDTQRWSKIHDEAEVEMESEMPSGRSSLVSQVYGNSLVIFGGYNGQVVLNDYYEYRLEPVWIPESTYVTDMRTLVNNRELSDVTFLVEGQAVYASRIHLAARSEHFRAMLFGGMRESSSG-EIELPGLSHAVFIKILEFLYTDTVTDIPPDVAVPLLIAAEQYLLERLKGLCEDYIRRGVSVGNAXXXXXXXXXXXXXX--------XXXXXXXFILEHLEEIKQEPAFLDLKSEPELLMEILMSATS 528
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A6U6MZ52_9DINO (Hypothetical protein n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U6MZ52_9DINO) HSP 1 Score: 192 bits (489), Expect = 6.200e-54 Identity = 98/192 (51.04%), Postives = 137/192 (71.35%), Query Frame = 1
Query: 334 FQPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTE--IEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQ 903
F+P+L+PP L +D+R+L+NN +DV F+V+ VYA+R HLA RSEHFRA+L+GGMRES + ++ I I D+SHSVFL LLEY+YTD +SDV A+ LL+A+E++LL RLK LCE+ IRKSI++E V + + A H AEGLK +I +DF++ N E +K+TP F EL EP L+ E++ R+
Sbjct: 331 FEPVLIPPSILMDDLRKLINNPMFADVTFLVENQTVYATRAHLASRSEHFRALLYGGMRESSSTSQEPIVIPDISHSVFLLLLEYIYTDQISDVGSKMAVPLLIAAERFLLDRLKALCEDIIRKSISIENVVQVMMTAKVHRAEGLK--------DICMDFIVTNEEKIKTTPAFRELIAEPTLMYELLMRR 514
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A7S1A9A8_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9A8_NOCSC) HSP 1 Score: 189 bits (479), Expect = 1.870e-52 Identity = 95/191 (49.74%), Postives = 135/191 (70.68%), Query Frame = 1
Query: 337 QPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTE--IEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQ 903
+P+ +PP L D+R+L+NN +DV F+V+ PVYA+R HLA RSEHFRA+ +GGMRES +GTE I + D++H VFL LLEY+YTD + D+ D A++LL+A+E++LL RLK LCE+ IRK I+++ V I + A H AEGLK +I +DF++ N E +K+TP F EL QEP L+ E++ R+
Sbjct: 332 EPVSIPPSNLVNDLRKLINNPAFADVTFLVESQPVYATRAHLAARSEHFRALFYGGMRES-SGTEEQIVLPDIAHPVFLLLLEYIYTDQVGDINSDLAVHLLIAAERFLLDRLKALCEDIIRKCISIDNVVQIMMAAKAHRAEGLK--------DICMDFIISNEEKIKTTPAFRELIQEPTLMYELLMRR 513
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A812K7F3_9DINO (Lztr1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812K7F3_9DINO) HSP 1 Score: 185 bits (470), Expect = 3.420e-51 Identity = 91/190 (47.89%), Postives = 136/190 (71.58%), Query Frame = 1
Query: 337 QPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRES-EAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQ 903
+P+ +PP L +D+R+L+NN +DV F+V+ VYA+R HLA RSEHFRA+ +GGMRES +A +I ++DV+H VFL LLEY+YTD + +++ + A++LL+A+E++LL RLK LCE+ IRKSI+++ V I + A H A+GLK +I +DF++ N E +K TP F EL QEP L+ E++ R+
Sbjct: 328 EPVSIPPSNLVDDLRKLINNPAFADVTFVVENQSVYATRAHLAARSEHFRALFYGGMRESSDAEEQIVLQDVAHPVFLLLLEYIYTDQVGEISSELAVHLLIAAERFLLDRLKALCEDIIRKSISIDNVVQIMMTAKAHRADGLK--------DICMDFIITNEEKIKPTPAFKELIQEPTLMYELLMRR 509
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Match: A0A2R5GK91_9STRA (Kelch domain-containing protein 10 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK91_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.590e-50 Identity = 139/280 (49.64%), Postives = 173/280 (61.79%), Query Frame = 1
Query: 70 GAVPTPRYFHSCAIHNGSMYVFGGYNGSDRLCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFQPLLVPPPTLQEDMRRLVNNRELSDVKFIVDGFPVYASRIHLALRSEHFRAMLFGGMRESEAGTEIEIKDVSHSVFLKLLEYLYTDTLSDVTPDQALNLLVASEQYLLGRLKTLCEEAIRKSITLETVCTIFLLAHKHNAEGLKASDTFILMEIALDFVLDNMEGVKSTPGFLELKQEPDLLMEIIFRQAS 909
G P RYFH+C IH YVFGGY G+ RL XXXXXXXXXXXXXXXXXXXXXXXXX + V PP L D+ +L+++ SDV F+V+ PV A R LA RSEHFRA+LFGGMRE A IE+ D+ + VF ++EYLYTD + +VTP+ A+ LLVASE+Y+L RLK+LCE AI KSIT I L A+ +NA+ LK I LDF++DN+ +++TP F ELKQEP+LLMEII R +
Sbjct: 261 GYRPIGRYFHACGIHGDLFYVFGGYQGAQRLNDMHQFSFTTRTWRQLKITGEVPSGRSSLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXLSINVEPPRLTSDLAKLIDHELFSDVTFMVENRPVRAVRALLAARSEHFRALLFGGMREDLAKV-IELPDIQYDVFRAVVEYLYTDAV-EVTPELAVPLLVASERYILPRLKSLCEVAIFKSITPVNCVQILLQAYMYNADSLK--------NICLDFIVDNIVALRATPEFQELKQEPELLMEIIMRSSG 530 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig299.8118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig299.8118.1 >prot_H-paniculata_contig299.8118.1 ID=prot_H-paniculata_contig299.8118.1|Name=mRNA_H-paniculata_contig299.8118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=301bp MNDFYRCDLETMTWAEIPGMGAVPTPRYFHSCAIHNGSMYVFGGYNGSDRback to top mRNA from alignment at H-paniculata_contig299:338..9810+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig299.8118.1 ID=mRNA_H-paniculata_contig299.8118.1|Name=mRNA_H-paniculata_contig299.8118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9473bp|location=Sequence derived from alignment at H-paniculata_contig299:338..9810+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig299:338..9810+ >mRNA_H-paniculata_contig299.8118.1 ID=mRNA_H-paniculata_contig299.8118.1|Name=mRNA_H-paniculata_contig299.8118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1806bp|location=Sequence derived from alignment at H-paniculata_contig299:338..9810+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |