prot_H-paniculata_contig29854.8107.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29854.8107.1
Unique Nameprot_H-paniculata_contig29854.8107.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length189
Homology
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 110 bits (274), Expect = 1.590e-24
Identity = 80/257 (31.13%), Postives = 118/257 (45.91%), Query Frame = 0
Query:    1 MEEEGGALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKGEYLIET-------------------------RMDVDAAYLNPPVEEELFVKLPP----------------------------EFSPFSRDIPFGETNL--------------LVAVYVDDVVIAGHR-EKVDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE 189
            M+EE   + + G +  ED   LPAGR  I  KW+  +K  ++G+++ YKARLVAQG+SQ+ G    ET                         +MDV  AYLN  +EEE++++ P                             EF      I F +                 ++ V+VDD++I     E + E K  +   F +KDLG   +++GIE++RDR NGTI++SQ  YI  VL R+G    R V TP++
Sbjct:  898 MDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLD 1151          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 104 bits (260), Expect = 1.080e-22
Identity = 75/235 (31.91%), Postives = 114/235 (48.51%), Query Frame = 0
Query:   22 LPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKG------------------------EYLIET-RMDVDAAYLNPPVEEELFVKLPPEF----------------SPFSRD-----------IPFGETN--------------LLVAVYVDDVVI-AGHREKVDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE 189
            L  GR+ +  +W  K K+   G +  YKARLVA+GF+QVKG                        E  +E  +MDV  A+LN  ++EE+++ LPP F                   SR+           + F   N              ++VAVYVDD++I +   E V + K ++  +F M DLG    +LG+E+ RDRP+ T++ISQ +Y  E+L+R+G  +C+  PTP+E
Sbjct:  242 LLRGRRVVDCRWTFKEKRGPKGEILRYKARLVAKGFTQVKGVDYNEMFAPVVKFTSIRTLLALTTELDLEIHQMDVKTAFLNRDLKEEIYMNLPPGFRKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKDDNGIRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPME 476          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: UPI00196742A4 (uncharacterized protein LOC25494186 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI00196742A4)

HSP 1 Score: 102 bits (255), Expect = 5.460e-22
Identity = 67/184 (36.41%), Postives = 105/184 (57.07%), Query Frame = 0
Query:    7 ALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKGEYLIETRMDVDAAYLNPPVEEELFVKLPPEFSPFSRDIPFGETNLLVAVYVDDVVIAGHREKV-DEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE 189
            AL  N  W+   P   P G+K +  +W+ K K K +G V  YKARLVA+GF+Q+KG  L +  MDV  A+L+  +EEE+++++P  +    + +   +  + V VYVDD+V+AG+     ++FK  + Q F MKDLGSL   LG+E+ R      + I Q  Y  ++L +    +C+    P+E
Sbjct:  562 ALEDNKTWDVMLP---PMGKKVVGCRWVYKVKYKASGEVEKYKARLVAKGFTQIKGWELHQ--MDVSNAFLHGDLEEEVYMQVPDGYQVPKKGMVCHKF-MAVLVYVDDLVVAGNNSSTCNKFKQYLKQCFHMKDLGSLKYFLGLELARGATG--LFICQRKYTLDILSKCKMLDCKPSSFPME 737          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A438GE57_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GE57_VITVI)

HSP 1 Score: 102 bits (253), Expect = 9.580e-22
Identity = 68/213 (31.92%), Postives = 111/213 (52.11%), Query Frame = 0
Query:    1 MEEEGGALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKG-------------------------EYLIETRMDVDAAYLNPPVEEELFVKLPPEFSPFSRDIPFGETNLLVAVYVDDVVIAGHREKVDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPV 188
            M++E  +L+ N  WE  +   LP G+KA+  KW+ + K + +GS   YKARLV +GF Q +G                         E L   ++DV  A+L+  +EE+L++  P EF      I  G+          D+      EK++  K  + ++F MKDLG+  ++LG+ + RD+PNGT+ +SQ  Y+++VL R+  +E + V TP+
Sbjct:  221 MKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRIKNEHDGSKR-YKARLVVKGFHQKEGIDYTEIFSLVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEEF------IVQGQER-------SDI------EKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKPNGTLKLSQSEYVKKVLSRFNMNEAKPVSTPL 410          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 101 bits (251), Expect = 1.120e-21
Identity = 76/243 (31.28%), Postives = 109/243 (44.86%), Query Frame = 0
Query:   12 GAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKGEYLIET-------------------------RMDVDAAYLNPPVEEELFVKLPP----------------------------EFSPFSRDIPFGETNL--------------LVAVYVDDVVIAGHR-EKVDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPT 186
            G +  ED   LPAGR  I  KW+  +K  ++G+++ YKARLVAQG+SQ+ G    ET                         +MDV  AYLN  +EEE++++ P                             EF      I F +                 ++ V+VDD++I     E + E K  +   F +KDLG   +++GIE++RDR NGTI++SQ  YI  VL R+G    R V T
Sbjct:    2 GTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVST 241          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A5A7TP23_CUCME (Integrase, catalytic core n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TP23_CUCME)

HSP 1 Score: 99.8 bits (247), Expect = 2.570e-21
Identity = 72/215 (33.49%), Postives = 108/215 (50.23%), Query Frame = 0
Query:    1 MEEEGGALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKGEYLIET-------------------------RMDVDAAYLNPPVEEELFVKLPPEFSPFSRDIPFGETNLLVAVYVDDVVIAGHR-EKVDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE 189
            M +E  AL K   W+  D   LP  ++ I  KWI K K   +G++ CYKARLVA+G+SQ  G    ET                         +MDV  A+LN  + EE+++K PP  S      P  +  +L+ +YVDD++I G+  + + + +H + Q F MKDL SL+  LG+EV   RP+    +SQ  Y  ++L R G  +     T ++
Sbjct:  102 MNDELQALEKTHTWDYVD---LPPSKRPIDCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMMSVRSLLAVAAVKQWSLLQMDVKNAFLNGSLFEEVYMKPPPGTSS-----PPHKGIVLLLLYVDDIIITGNDPQAISDLQHYLGQHFEMKDLRSLNYFLGLEV--SRPSDGYLLSQAKYASDLLARLGITDSNTASTSLD 306          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: UPI000E6F7FA5 (uncharacterized protein LOC113359913 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F7FA5)

HSP 1 Score: 99.0 bits (245), Expect = 4.580e-21
Identity = 77/215 (35.81%), Postives = 107/215 (49.77%), Query Frame = 0
Query:    1 MEEEGGALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKG-EY---------LIETR---------------MDVDAAYLNPPVEEELFVKLPPEFSPFSRDIPFGETNLLVAVYVDDVVIAGHRE-KVDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE 189
            M+ E  AL  N  W       LP G++ I  KWI K K + +GS+   KA LVA+G++Q +G +Y         L+  R               +DV+ A+L    EEE+++KLPPEFS        G  +L V VYVDD++I G+ E  +   K  + + F +KDLG L   LGIEV R   N  I + Q  YI ++LK  G    R    P+E
Sbjct:   10 MKNEVSALEANNTWTRMS---LPHGKQPICCKWIYKIKYRPDGSIERSKACLVAKGYTQAEGIDYHDTFAPVAKLVTVRILLSVADVKGWSLHQLDVNNAFLQGDHEEEIYMKLPPEFSREGEHS--GSVSLFVLVYVDDIIITGNNETSISNLKKFLEKSFSIKDLGKLQYFLGIEVSRS--NRGIFLCQRKYILDILKDAGLTGDRTSDFPME 217          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A2P4Y5K5_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5K5_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.660e-21
Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 0
Query:   21 RLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKGEYLIETRMDVDAAYLNPPVEEE--LFVKLPPEFSPFSRDIPFGETNLLVAVYVDDVVIAGHR-EKVDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE 189
            +LP  ++A+ TKW+ K K+  +GS+  YKARLVA+GF Q  G    ET        L+P V     L++K+                 +L+ VYVDDV++ G+  E + E K  +  RF M D G  S +LGIEV  D  +G++T+SQ  YI+++L+R+G  +C+   +PV+
Sbjct:  637 KLPNNQRAVGTKWVFKIKRNADGSIEKYKARLVAKGFVQKYGIDYTET--------LSPVVNYGPCLYIKI------------VNSECVLLLVYVDDVLVTGNSAELIAEVKRQLKSRFEMTDSGKCSFILGIEVV-DNADGSVTLSQARYIKDILERFGMQDCKPTASPVD 787          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A2N9GMX8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GMX8_FAGSY)

HSP 1 Score: 99.0 bits (245), Expect = 6.570e-21
Identity = 76/205 (37.07%), Postives = 109/205 (53.17%), Query Frame = 0
Query:    1 MEEEGGALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKGEYLIET--RMDVDAAYLNPPVEEELFVKLPPE--------FSPFSRD----IPFGETNL-LVAVYVDDVVIAGHREK-VDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE 189
            M +E  AL K   W   D   LP G+ A+  KW+ K K + +GSV  YKARLVA+GF+Q  G    ET   MDV  A+LN  + EE++++ PP         F P S D    I    T + L+ +YVDD++I G     + + +  + Q+F MKDLG+LS  LG+EV     +    +SQ  Y  ++L + G  +   V TP+E
Sbjct:   65 MADELDALHKTHTW---DMTTLPPGKSAVGCKWVYKIKTRADGSVERYKARLVARGFTQEYGIDYEETFAPMDVKNAFLNGDLLEEVYMQPPPGYPDSQNQGFIPSSYDSALFIRHTSTGITLILLYVDDMIITGDDPAGIRDLQQFLSQQFEMKDLGTLSYFLGLEVTSS--SDGYYLSQAKYASDLLSKAGLTDSNTVSTPLE 264          
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Match: A0A5B6W8P8_9ROSI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6W8P8_9ROSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.170e-20
Identity = 71/218 (32.57%), Postives = 107/218 (49.08%), Query Frame = 0
Query:    7 ALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKARLVAQGFSQVKGEYLIET-------------------------RMDVDAAYLNPPVEEELFVKLPPEFSPFSRD----------IPFGETNLLVAVYVDDVVIAGHREK-VDEFKHNIIQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPV 188
            A + N  W+      LPAGR+A+  KWI K K+  +GS+A YK RLV +G+ Q  G   +ET                         ++D++ A+LN  + EE+++  PP F     D            +G   L   VYV++++I G+    +D+F   +  +F +KDLG L   LGIEV R  PNG + +SQ  YI E+L+R      +  PTP+
Sbjct:  590 ASIANNTWDLVP---LPAGRRAVGYKWIFKIKRHADGSIARYKGRLVVKGYLQEAGVDFLETFSPVVKPTTIGVILALVVSLGWSLRQVDINNAFLNGDLREEIYMIQPPGFEQQRSDGKQLVCRLRKALYGSQLLYALVYVNNIIITGNDSLCIDQFVKELDMQFSLKDLGQLHYFLGIEVTRT-PNG-LFLSQKKYILELLQRASMYRSKPSPTPM 802          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29854.8107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A284QR88_ARMOS1.590e-2431.13Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A0C9VSW1_SPHS41.080e-2231.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00196742A45.460e-2236.41uncharacterized protein LOC25494186 n=1 Tax=Medica... [more]
A0A438GE57_VITVI9.580e-2231.92Retrovirus-related Pol polyprotein from transposon... [more]
A0A284R853_ARMOS1.120e-2131.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5A7TP23_CUCME2.570e-2133.49Integrase, catalytic core n=1 Tax=Cucumis melo var... [more]
UPI000E6F7FA54.580e-2135.81uncharacterized protein LOC113359913 n=1 Tax=Papav... [more]
A0A2P4Y5K5_9STRA4.660e-2136.63Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A2N9GMX8_FAGSY6.570e-2137.07Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A5B6W8P8_9ROSI1.170e-2032.57Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 22..64
e-value: 1.1E-8
score: 35.1
coord: 102..188
e-value: 1.8E-18
score: 67.1
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 25..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29854contigH-paniculata_contig29854:1935..2717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29854.8107.1mRNA_H-paniculata_contig29854.8107.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29854 1923..2717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29854.8107.1 ID=prot_H-paniculata_contig29854.8107.1|Name=mRNA_H-paniculata_contig29854.8107.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MEEEGGALVKNGAWESEDPGRLPAGRKAIRTKWIIKRKQKDNGSVACYKA
RLVAQGFSQVKGEYLIETRMDVDAAYLNPPVEEELFVKLPPEFSPFSRDI
PFGETNLLVAVYVDDVVIAGHREKVDEFKHNIIQRFRMKDLGSLSRVLGI
EVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2