prot_H-paniculata_contig29812.8100.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29812.8100.1
Unique Nameprot_H-paniculata_contig29812.8100.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
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BLAST of mRNA_H-paniculata_contig29812.8100.1 vs. uniprot
Match: A0A6H5K5F4_9PHAE (AAA_16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.780e-19
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 0 
Query:    5 DGVPVPPLLVTGPSATGKTSIVRAVLDYRGFSYVHVNCVEVMAKQGLLEAIVEQTAG 61
            DGVPVPPLLVTGP  TGKTS+VRAVLD+RG SY +VNC EV+ ++ LLEA+VEQ AG
Sbjct:   86 DGVPVPPLLVTGPPCTGKTSVVRAVLDHRGCSYAYVNCAEVVQRRDLLEALVEQVAG 142
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BLAST of mRNA_H-paniculata_contig29812.8100.1 vs. uniprot
Match: D7FZ80_ECTSI (Putative Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ80_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 3.550e-18
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:    5 DGVPVPPLLVTGPSATGKTSIVRAVLDYRGFSYVHVNCVEVMAKQGLLEAIVEQTAG 61
            DGVPVPPLLVTGP  TGKTS+VRAVLD+RG SY +VNC EV+ ++ LLE +VEQ AG
Sbjct:  130 DGVPVPPLLVTGPPCTGKTSVVRAVLDHRGCSYAYVNCAEVVQRRDLLEVLVEQVAG 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29812.8100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5F4_9PHAE1.780e-1973.68AAA_16 domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FZ80_ECTSI3.550e-1871.93Putative Mn/Fe superoxide dismutase n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..71
e-value: 5.4E-8
score: 34.8
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 12..57
e-value: 9.8E-6
score: 26.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29812contigH-paniculata_contig29812:2064..2291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29812.8100.1mRNA_H-paniculata_contig29812.8100.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29812 2064..2291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29812.8100.1 ID=prot_H-paniculata_contig29812.8100.1|Name=mRNA_H-paniculata_contig29812.8100.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
MQVADGVPVPPLLVTGPSATGKTSIVRAVLDYRGFSYVHVNCVEVMAKQG
LLEAIVEQTAGSRLVLLRRNIIIRSI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase