mRNA_H-paniculata_contig11261.810.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.550e-52 Identity = 96/206 (46.60%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 7 LVSLQLFAKHLWSYLQPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQNNG-KRRETAISMDTAEWFAGRR 621
+ +L AK+LWS + PWL+ DV+ V AS +SPF+ +H+RRGDK+S+ EE+L A +L+ + + + DIKGIWVASD+P V+ +++ +A Y PNV +I W S GV+GGP+ +T T Q++Y+ FVY FADLQQL +AD+FVGTFSSNIGRL+ LLR++ G K R +A+S+D W AGRR
Sbjct: 240 IAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFLEGNDSQL------SVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGGPEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSID-GPWRAGRR 438
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI) HSP 1 Score: 180 bits (457), Expect = 3.920e-51 Identity = 94/208 (45.19%), Postives = 140/208 (67.31%), Query Frame = 1
Query: 7 LVSLQLFAKHLWSYLQPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGDKIS--KEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQNNG-KRRETAISMDTAEWFAGRR 621
+ +L AK+LWS + PWL+ DV+ V AS +SPF+ +H+RRGDK++ + +++ +E+L AA +L+ + + + DIKGIWVASD+P V+ +++ +AP Y PNV D+I W S GV+GGP+ +T T +++Y+ FVY ADLQQL +AD+FVGTFSSN+GRL+ LLR++ G K R +A+S+D W AGRR
Sbjct: 247 IAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYL-CKEYLEAAVEFLEG------DDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRTATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSID-GPWRAGRR 446
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE) HSP 1 Score: 162 bits (411), Expect = 5.490e-46 Identity = 85/197 (43.15%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 19 QLFAKHLWSYLQPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQN-NGKRRETAISMDTAEW 606
Q+ A+ LW L PWL+EDV + ++ PFV +HVRRGDK+ + +E +E+L AAAR+ +DI+ IWVASDD VV E+R +A YFPNV+ ++IVWVS G GG ++T+T Q Y FV +FADL+ LA+ +FVGT++SN+ RLV LLR+ +G R++ IS+D E+
Sbjct: 103 QVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDNK-------ASQDKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGG----AVTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEF 288
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI) HSP 1 Score: 105 bits (261), Expect = 5.010e-25 Identity = 59/165 (35.76%), Postives = 94/165 (56.97%), Query Frame = 1
Query: 124 FVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQNNGKRRETAISMDTAEWFAGR 618
+V +H+RR DK ++ ++ + +L A YL + N A +I GIWV+SDD V E++ LA +FP + + +++V+ GG + + SY + VY+ A+L+ LA + VF GTFSSN+GR+V L+R+ E+A+S+D WFAGR
Sbjct: 6 YVGLHIRRTDKANEVQP--VKTKAYLAKAVNYLASPTNDM------AATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVT----GGKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLNMPDESAVSVDFPAWFAGR 158
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: D7FU71_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU71_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 2.940e-20 Identity = 49/122 (40.16%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 34 HLWSYLQPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDG 399
+++S +QPW KED + ++ S+V ++ +VAIHVRRGDK++ + E E +L AAA LQ S G+++ S I G+WV+SDDP V+ E++ LA +YF NV D +V ++ +G
Sbjct: 51 YVYSNMQPWFKEDTDAMLLQSDVHSVRSVRYVAIHVRRGDKVTLQEASRTEVEVYLQAAASILQNS-TGSVDGPNS----IGGLWVSSDDPSVLPEVKALASTYFANVQDDRVVSITFRAEG 167
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: H2XQC4_CIOIN (GT23 domain-containing protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=H2XQC4_CIOIN) HSP 1 Score: 63.2 bits (152), Expect = 3.800e-8 Identity = 56/195 (28.72%), Postives = 90/195 (46.15%), Query Frame = 1
Query: 52 QPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGDKISKEMGLWIEAEEFLVAAA----RYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQNNGKRRET---AISMDTAEWFAG 615
Q WL D+ T + + D P V +H+RR DKIS+ +++ ++V A RY + + N + + K I++A+D+ +V E P Y + G P +S + ++ + Y+ D+ L D FVGTFSSNIG++VY LRQ R+T A+S+D + G
Sbjct: 252 QEWLLNDLETC----KKEIGFDHPIVGVHIRRTDKISE--AAYVDLSRYMVHAKNWFDRYAEKNPNKSFK---------KRIYLATDEVNVTLEANERYPEY-------------QFISGLPNASFHAAKRREEE--TVKYLLHDVYLLRDCDYFVGTFSSNIGQMVYELRQ--ALDRDTTFEAVSLDNTYLYIG 414
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: A0A7S0BFM2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFM2_9RHOD) HSP 1 Score: 61.2 bits (147), Expect = 6.300e-8 Identity = 55/195 (28.21%), Postives = 89/195 (45.64%), Query Frame = 1
Query: 31 KHLWSYLQPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQNNGKRRETAISMDTAEWFAG 615
KH+W + ++E N + +++ FV +H+RRGDK E L+ Y E + I I++A+DD ++ E+R L P Y I +D G + +Q+ S + + A++ L A F+GT+SSNIGRL+ +LR + + T+ISMD A W +G
Sbjct: 25 KHVWKPNRN-IQERTNDAMRRIDLRP---DEFVGLHIRRGDKA---------LEVPLIPLESY--------AEIVRMSDPAISKIFLATDDGSIIWELRDLLPEYA-------IYTFADPQSTGHLQRNANEDPMRQTVLSTMSLVAEIDILRQAKYFIGTYSSNIGRLLAVLRDKDIR---TSISMDVA-WSSG 187
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: A0A813LXS9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LXS9_POLGL) HSP 1 Score: 60.1 bits (144), Expect = 1.570e-7 Identity = 52/178 (29.21%), Postives = 81/178 (45.51%), Query Frame = 1
Query: 61 LKEDVNTVVTASEVKALSDSPFVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQNNGKRRETAISMD 594
LK + + + V ++ IH+R GDK IEA L+ +A+Y +++ + +I I+VASDDP + +++ PS + G K+ + S + + + D+ L + VFVGT SSNIGRLVY LR + K + AISMD
Sbjct: 61 LKPKASAEIQQTLVSLNLGGDYIGIHIRHGDK-------GIEAA--LIDSAKYARSAIEAAYNY------NITSIFVASDDPMALNDLQNALPSTVTAKWAPRL---------GDKTYHYEAIGASGSNDANLALLTDVVGLLQSKVFVGTASSNIGRLVYNLRTEDQK--QQAISMD 212
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: A0A1W4XCQ9_AGRPL (Alpha-(1,6)-fucosyltransferase n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XCQ9_AGRPL) HSP 1 Score: 60.1 bits (144), Expect = 4.470e-7 Identity = 42/145 (28.97%), Postives = 67/145 (46.21%), Query Frame = 1
Query: 121 PFVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYSSFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQ 555
P V IHVRR DKI E EE++ A Y + + ++++ +++ASDDP V+ E R P+Y + G PK S + ++ + S + +D+ L+ +D V TFSS + RL Y + Q
Sbjct: 348 PVVGIHVRRTDKIGTEASFH-SIEEYMTAVEDY--------YDALDMSEDNVRRVYIASDDPTVITEAREKYPNYE--------------ILGDPKISSSAAVETRYTEDSLKGIISDIHFLSQSDYLVCTFSSQVCRLAYEIMQ 469
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Match: A0A6J1WGJ6_GALME (alpha-(1,6)-fucosyltransferase n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WGJ6_GALME) HSP 1 Score: 59.7 bits (143), Expect = 6.080e-7 Identity = 51/191 (26.70%), Postives = 85/191 (44.50%), Query Frame = 1
Query: 52 QPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGDKISKEMGLWIEAEEFLVAAARYLQTSHNGTLEHTGSATEDIKGIWVASDDPDVVGEIRTLAPSYFPNVVVDNIVWVSDGVDGGPKSSGISTYTSQQSYS--SFVYMFADLQQLASADVFVGTFSSNIGRLVYLLRQNNGKRRETAI-SMDTAEWFAG 615
+P +++ +N + K +P V +H+RR DK+ E E++ Y LE T T D++ +++A+DDP+V+ + R+ PSY ++ D S T + + Y+ S + DL LA D V TFSS +GR+ Y + Q N + S+D +F G
Sbjct: 333 RPSMQKSINETMAKMNFK----TPIVGVHIRRTDKVGTEAAFH-HIHEYMAHVKDYYDQ-----LELT--RTVDVRRVYLATDDPNVLVDARSKYPSYQ---------FLGD-------ESVAKTAATHRRYTPLSLAGLLLDLHMLAMCDYIVCTFSSQVGRVAYEMMQTNRVDASNSFFSLDDIYYFGG 495 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11261.810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11261.810.1 >prot_H-paniculata_contig11261.810.1 ID=prot_H-paniculata_contig11261.810.1|Name=mRNA_H-paniculata_contig11261.810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp MTLVSLQLFAKHLWSYLQPWLKEDVNTVVTASEVKALSDSPFVAIHVRRGback to top mRNA from alignment at H-paniculata_contig11261:4511..8166- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11261.810.1 ID=mRNA_H-paniculata_contig11261.810.1|Name=mRNA_H-paniculata_contig11261.810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3656bp|location=Sequence derived from alignment at H-paniculata_contig11261:4511..8166- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11261:4511..8166- >mRNA_H-paniculata_contig11261.810.1 ID=mRNA_H-paniculata_contig11261.810.1|Name=mRNA_H-paniculata_contig11261.810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at H-paniculata_contig11261:4511..8166- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |