prot_H-paniculata_contig2980.8096.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2980.8096.1
Unique Nameprot_H-paniculata_contig2980.8096.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
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BLAST of mRNA_H-paniculata_contig2980.8096.1 vs. uniprot
Match: D7FKR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR8_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 4.740e-91
Identity = 147/237 (62.03%), Postives = 173/237 (73.00%), Query Frame = 0 
Query:    2 ARLPAWAKGKSVRLELGKTHIKLFLKEEEDKPIIEGDLRGIVRLDGSYWTMESLDDGGKMLYLTLEKIPELTGLGPWMGVVQEEEQVTSDYPEEKKVLYASIVLAVESDKKRP---TSVPRHTGEVDEDGFCQDLMAVQGMSAAMIARQAGVPRNGNALFSAVSASVDYHTTGEHLSVEPKAIELKAKELRKRAIDYLADAYKQGKQIFLEGNAISARELVGAQAKARNMVDGDEYL 235
            ARLPAWAKGKSV L++  TH+KLFLKEEE  PIIEGDLRG + +DGSYWTME+LDD GKMLYLTLEK P+LTGLGPWMGVVQ E+QV SDYPEE K   A I      +KK     +  P+HTG VDEDGFC+DL+AVQ MS AM+ARQ  VP NGNALFSAV+ S  +  +GEH       IE  AK+LR++ +DYL  AYK+   I++ G  + AR  V AQAKA +M DGDEYL
Sbjct:   81 ARLPAWAKGKSVVLDMTNTHVKLFLKEEESTPIIEGDLRGAILMDGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQVNSDYPEEDKA--AEIAAMAHEEKKAQDAESGTPKHTGVVDEDGFCRDLLAVQAMSGAMVARQ--VPVNGNALFSAVAISKWFIESGEHPDASSPEIETIAKDLRQKTLDYLTKAYKENAPIYMSGEYMDARPFVAAQAKANSMADGDEYL 313
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2980.8096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKR8_ECTSI4.740e-9162.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 8..68
e-value: 8.6E-5
score: 23.5
IPR007052CS domainPROSITEPS51203CScoord: 1..82
score: 8.931
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 1..92
e-value: 2.3E-10
score: 42.5
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 5..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2980contigH-paniculata_contig2980:15573..19280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2980.8096.1mRNA_H-paniculata_contig2980.8096.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2980 15549..19280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2980.8096.1 ID=prot_H-paniculata_contig2980.8096.1|Name=mRNA_H-paniculata_contig2980.8096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MARLPAWAKGKSVRLELGKTHIKLFLKEEEDKPIIEGDLRGIVRLDGSYW
TMESLDDGGKMLYLTLEKIPELTGLGPWMGVVQEEEQVTSDYPEEKKVLY
ASIVLAVESDKKRPTSVPRHTGEVDEDGFCQDLMAVQGMSAAMIARQAGV
PRNGNALFSAVSASVDYHTTGEHLSVEPKAIELKAKELRKRAIDYLADAY
KQGKQIFLEGNAISARELVGAQAKARNMVDGDEYLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007052CS_dom
IPR008978HSP20-like_chaperone