prot_H-paniculata_contig298.8093.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig298.8093.1
Unique Name	prot_H-paniculata_contig298.8093.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	482

Homology

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BLAST of mRNA_H-paniculata_contig298.8093.1 vs. uniprot
Match: D7FGQ6_ECTSI (Sel1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ6_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 6.470e-77
Identity = 273/483 (56.52%), Postives = 308/483 (63.77%), Query Frame = 0

Query:    1 MGVTRQSERDATGAVECYSRAAAEGHAKAQHNLAAMLEKGAPGVLKDESEAVRLFQLAADQGLAESCYSLAMHLKFGLGIDXXXXXXXXXXXXXXXXXXXXXXXXXXLMYEKRRGVSPDAPEADLLEVTQECYQVAAXXXXXXXXXXXXXXXLTGRVRGGEPGEAVGWFKKAADDGDLSGLWNLALCYDRGIGVARDPKVAQALQQQCRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPVGPGVAVALSRRRSADPKTLHPPANPTTAMPHATYSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXLPRPLPENTDSSNRNNSTIINRRQSQNKDHSPEPQVSSLSTSKLKDPVRRSSS---KPYKYIPKGDDDI---IAGR-KTSYEEGISNGKGEHQRAVETEEARLPERXXXXXXXXARRPENGAVGGDGVMTSPIRQRKNSLLLKPTPQAIARVKAAVERRRGLEAA 476
            MGVT+Q E +  GAVECY RAA +GHAKAQHNLAA+ EKG PGVLKD++EAVRLF+LAA+QGLAES YSLAMHLKFGLGI XXXXXXXXXXXXXXXXXXXXXXXXXX MYEKRRGVS DAPE DLLE T+ECY+   XXXXXXXXXXXXXXXL+GR+ G E  EA+G FK AAD GDLSGLWNLALCY+RG+GVARDP  AQALQQQCR+R                              A P+ P +      RRS+DP          +A+P      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX        T  + R NS  I          SPE   +S S        RRSSS   +PYKY+PK D  +     GR  TS     + G     +     +  +P++              G       +  P R RKNSLLLKPTPQAIARVKAAVERR+ L+AA
Sbjct:    1 MGVTKQKEGNIVGAVECYGRAARDGHAKAQHNLAAIFEKGMPGVLKDDAEAVRLFRLAAEQGLAESSYSLAMHLKFGLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYEKRRGVSSDAPEGDLLEATRECYEAXXXXXXXXXXXXXXXXXLSGRLPGREQSEALGCFKMAADQGDLSGLWNLALCYERGVGVARDPLAAQALQQQCRDREAGGRRPSVTGDQ-----------------AGPLAPHL------RRSSDPSA--------SAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA--TRGNPRANSQNI----------SPESAAASAS--------RRSSSPSKQPYKYVPKRDGPLPTDTTGRPSTSSNSQAAEGPAAGGKIGRNSQD-MPQQGAADDAASPTGARTGGPASAPWIPPPPRDRKNSLLLKPTPQAIARVKAAVERRKKLQAA 431

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BLAST of mRNA_H-paniculata_contig298.8093.1 vs. uniprot
Match: A0A6H5JPE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPE5_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.640e-53
Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 0

Query:    1 MGVTRQSERDATGAVECYSRAAAEGHAKAQHNLAAMLEKGAPGVLKDESEAVRLFQLAADQGLAESCYSLAMHLKFGLGIDXXXXXXXXXXXXXXXXXXXXXXXXXXLMYEKRRGVSPDAPEADLLEVTQECYQVAAXXXXXXXXXXXXXXXLTGRVRGGEPGEAVGWFKKAADDGDLSG 180
            MGVT+Q E +A GAVECY RAA +GHAKAQHNLAA+ EKG PGVLK+++EAVRLF+LAA+QGLAES YSLAMHLKFGLGI+XXXXXXXXXXXXXXXXXXXXXXXXXX MYEKRRGVS DAPE DLLE T+ECY+   XXXXXXXXXXXXXXXL+GR+ G E  EA+G+FK AAD GDLSG
Sbjct:    1 MGVTKQKEGNAVGAVECYGRAARDGHAKAQHNLAAIFEKGMPGVLKNDAEAVRLFRLAAEQGLAESSYSLAMHLKFGLGIEXXXXXXXXXXXXXXXXXXXXXXXXXXXMYEKRRGVSSDAPEEDLLEATRECYEAXXXXXXXXXXXXXXXXXLSGRLPGREQSEALGYFKMAADQGDLSG 180

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BLAST of mRNA_H-paniculata_contig298.8093.1 vs. uniprot
Match: A0A835Z1C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.240e-21
Identity = 87/137 (63.50%), Postives = 99/137 (72.26%), Query Frame = 0

Query:    1 MGVTRQSERDATGAVECYSRAAAEGHAKAQHNLAAMLEKGAPGVLKDESEAVRLFQLAADQGLAESCYSLAMHLKFGLGIDXXXXXXXXXXXXXXXXXXXXXXXXXXLMYEKRRGVSPDAPEADLLEVTQECYQVAA 137
             GVT Q   +   A   Y+RAA  GH KAQHNLAAM EKG  G+ KD+ EAVRLF LAA+ GLAES YSLAMH K GLG +XXXXXXXXXXXXXXXXXXXXXXXXXX      RG++PD   A+ L+  +ECY+ AA
Sbjct:  440 QGVTHQRHGEQAAAAAMYARAAEMGHPKAQHNLAAMYEKGVSGMAKDDREAVRLFTLAAEAGLAESSYSLAMHFKLGLGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGIAPDVLAAEALDAAKECYRSAA 576

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig298.8093.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig298.8093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FGQ6_ECTSI	6.470e-77	56.52	Sel1 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5JPE5_9PHAE	1.640e-53	79.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z1C8_9STRA	8.240e-21	63.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 218..239
None	No IPR available	COILS	Coil	Coil	coord: 463..481
None	No IPR available	PANTHER	PTHR45011	FAMILY NOT NAMED	coord: 77..303 coord: 8..123
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 8..123
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 130..209
IPR006597	Sel1-like repeat	SMART	SM00671	sel1	coord: 142..177 e-value: 0.019 score: 24.1 coord: 178..207 e-value: 29.0 score: 9.7 coord: 64..99 e-value: 4.6E-5 score: 32.8 coord: 100..141 e-value: 6.2 score: 15.5 coord: 27..63 e-value: 1.4E-7 score: 41.2
IPR006597	Sel1-like repeat	PFAM	PF08238	Sel1	coord: 100..123 e-value: 0.2 score: 12.4 coord: 180..201 e-value: 1.8 score: 9.3 coord: 27..62 e-value: 1.6E-7 score: 31.8 coord: 64..96 e-value: 1.4E-5 score: 25.6 coord: 142..177 e-value: 8.7E-4 score: 19.9 coord: 9..26 e-value: 8.0 score: 7.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 126..244 e-value: 8.4E-18 score: 66.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 2..125 e-value: 1.0E-30 score: 109.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig298	contig	H-paniculata_contig298:16487..21750 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig298.8093.1	mRNA_H-paniculata_contig298.8093.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig298 16487..21750 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig298.8093.1 ID=prot_H-paniculata_contig298.8093.1|Name=mRNA_H-paniculata_contig298.8093.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=482bp
MGVTRQSERDATGAVECYSRAAAEGHAKAQHNLAAMLEKGAPGVLKDESE
AVRLFQLAADQGLAESCYSLAMHLKFGLGIDQDDAKCVYYLEKASEYGLA
KAIFNLGLMYEKRRGVSPDAPEADLLEVTQECYQVAAEAGVAKAAVNMGV
LYLTGRVRGGEPGEAVGWFKKAADDGDLSGLWNLALCYDRGIGVARDPKV
AQALQQQCREREKHQQPQQQQERQRQQQQQQQQQQQQQQRSAPPVGPGVA
VALSRRRSADPKTLHPPANPTTAMPHATYSNNNNQAVDTTATTTTQHRRR
SSSVPNGITPPPPQGPPPLPRPLPENTDSSNRNNSTIINRRQSQNKDHSP
EPQVSSLSTSKLKDPVRRSSSKPYKYIPKGDDDIIAGRKTSYEEGISNGK
GEHQRAVETEEARLPERFPERFPERARRPENGAVGGDGVMTSPIRQRKNS
LLLKPTPQAIARVKAAVERRRGLEAALEAEK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006597	Sel1-like
IPR011990	TPR-like_helical_dom_sf