prot_H-paniculata_contig2976.8081.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2976.8081.1
Unique Nameprot_H-paniculata_contig2976.8081.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length247
Homology
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BLAST of mRNA_H-paniculata_contig2976.8081.1 vs. uniprot
Match: D8LQ27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ27_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 4.430e-23
Identity = 67/140 (47.86%), Postives = 87/140 (62.14%), Query Frame = 0 
Query:  104 MRAAPTPGRQRKQDGTGEMARRWGEHPDEEDDGVKDTLDR------SPR--RTSVSTSLRHVRLSEDGKRVTVHSSEKGVDHELALNELVEVQGTPSKNRVVLRGRKLELRIGFEGDANAFKQFRQALVPNVDNGNTTSS 235
            M AAPTPGR+ + + T  MA+R   + ++ED+  ++ L        SP   +T VST LRH+RLS DG  + V S + GVDHELAL+EL+EV  TPS+  V L G  +E+RI F+G A A KQFR  LVP    G TT S
Sbjct:    1 MMAAPTPGRESEGERTWIMAKRVASNWEKEDESSRNRLSAPEASQPSPAVPKTFVSTRLRHLRLSPDGTTLVVKSEQGGVDHELALDELLEVHETPSEESVTLMGTDIEIRIAFKGQAKALKQFRNMLVPTGTTGTTTPS 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2976.8081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ27_ECTSI4.430e-2347.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2976contigH-paniculata_contig2976:5477..8201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2976.8081.1mRNA_H-paniculata_contig2976.8081.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2976 5477..8202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2976.8081.1 ID=prot_H-paniculata_contig2976.8081.1|Name=mRNA_H-paniculata_contig2976.8081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
VSFDGSREQLNAVGDEGEGEEREGIGGLPPGPATTFKKPPLRSTSMVSAK
SISEPAEQDFPHDTYDEEEAYLNVVTGVASSPARADKPARSLKRMNSVPS
IKEMRAAPTPGRQRKQDGTGEMARRWGEHPDEEDDGVKDTLDRSPRRTSV
STSLRHVRLSEDGKRVTVHSSEKGVDHELALNELVEVQGTPSKNRVVLRG
RKLELRIGFEGDANAFKQFRQALVPNVDNGNTTSSASNARGDAAKDY
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