mRNA_H-paniculata_contig297.8071.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A6H5LL89_9PHAE (Peptidase_M23 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL89_9PHAE) HSP 1 Score: 213 bits (543), Expect = 5.380e-64 Identity = 105/155 (67.74%), Postives = 126/155 (81.29%), Query Frame = 1
Query: 85 GQGRCIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLSPGGVFTLPSVAAIFSGPLSVQAE 549
GQGRCIQGN+T+ TH G L +AFDFKLR GT+VLA+R G+VA CDHF EGG R+ L PR+N VA+RH +DGTYTRY+H+M GGVLV+VGQEV AG+ IALSGNTG+S PHLHFDAV +LP ETS+L ++ P V LPSVAAIFSGPL+ + E
Sbjct: 3 GQGRCIQGNHTDDTHRGDLEYAFDFKLRPGTKVLASRAGVVAAYCDHFGEGGLRQGLRPRANYVALRH-RDGTYTRYVHLMRGGVLVQVGQEVAAGEVIALSGNTGYSPTPHLHFDAVKVLPQETSELWIVHPS-VLPLPSVAAIFSGPLNREVE 155
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A8J2WE38_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE38_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.650e-45 Identity = 87/164 (53.05%), Postives = 105/164 (64.02%), Query Frame = 1
Query: 37 VLPFESPKVNWMKWASGQGRCIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLSPGGVFT-LPSVAAIFS 525
LP+ W + G G+CIQG N TH G L ++FDFKL GT VLAAR G +A V DHFR GG + L PR+N VA+RH DG+Y RY H+ G L +VG+ V GQ IA SGNTG++ PHLHFD VN+LP ETS LR++SP L SVAA FS
Sbjct: 41 ALPYPGYLAAW-RLVKGHGKCIQGVNGRSTHRGTLCYSFDFKLAVGTPVLAARGGTIAAVVDHFRGGGAKAHLAPRANFVAVRH-SDGSYARYYHLKEKGSLYKVGERVGRGQQIAWSGNTGYTGGPHLHFDLVNLLPEETSTLRIVSPKHCRKRLQSVAAAFS 202
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A7S2C303_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C303_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.260e-45 Identity = 81/151 (53.64%), Postives = 100/151 (66.23%), Query Frame = 1
Query: 85 GQGRCIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLSPGGV----FTLPSVAAIFS 525
G G CIQGN+ TH G L +AFDF+L GT ++AAR G+VA HF EGG +L PR+N VA++H DGTY RY H+ GV V G VKAGQ + LSGNTGFSS PHLHFD V++LP +T L+++ P V TLP+V A FS
Sbjct: 47 GTGLCIQGNHGSSTHKGTLAYAFDFRLPTGTPLVAARPGVVAATAGHFNEGGLEGKLRPRANFVAVQH-SDGTYARYFHLRRQGVTVEAGDTVKAGQQVGLSGNTGFSSTPHLHFDVVDMLPEDTCVLKVVDPENVDTPILTLPAVIAAFS 196
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A7S3K4G7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4G7_9STRA) HSP 1 Score: 158 bits (400), Expect = 4.860e-43 Identity = 81/148 (54.73%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 28 ISCVLPFESPKVNWMKWASGQGRCIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLR 471
+ LP+ + K + ASG GRCIQG N TH G L ++FDFKLR GT VLAAR G+VA V HF GG R L PR+N +AIRH DG+Y RY H+ G ++VG VK GQ IALSGNTG++ PHLHFD VN+LP ET+ L
Sbjct: 20 LEFALPYPA-KSRIYRLASGHGRCIQGVNGISTHRGTLAYSFDFKLRVGTPVLAARGGVVAAVVTHFSGGGARAHLAPRANYIAIRH-DDGSYGRYYHLRKDGSKLKVGDRVKRGQVIALSGNTGYTGGPHLHFDVVNVLPEETAILH 165
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: F0Y178_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y178_AURAN) HSP 1 Score: 154 bits (389), Expect = 3.010e-41 Identity = 89/197 (45.18%), Postives = 110/197 (55.84%), Query Frame = 1
Query: 37 VLPFESPKVNWMKWASGQGRCIQGNNTEY--------------------THHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLSPGGVFTL-PSVAAIFSGPLSVQAELAAPL 564
LP+ W + SG GRCIQG N TH G L ++FDFKL GT V A R G+VA V HF GG + L PR+N VA+RH DG+Y RY H+ G L +VG V+AGQ IA SGNTG++ PHLH D VN+LP ETS+LR++ P + L PSVAA FS L + +A L
Sbjct: 24 TLPYPGRLAAW-RLMSGHGRCIQGVNGASPGARARGAAARERAIRSGASTHRGTLCYSFDFKLAVGTPVHAVRGGVVAAVVQHFSGGGAKAHLAPRANFVAVRH-DDGSYARYYHLRTDGSLFKVGDSVEAGQHIAFSGNTGYTGGPHLHLDVVNLLPEETSRLRVVEPKSLARLVPSVAAAFSCLLPREGSMACVL 218
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A7S4BTM6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BTM6_CHRCT) HSP 1 Score: 139 bits (349), Expect = 2.390e-35 Identity = 72/129 (55.81%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 97 CIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLSP 483
C+Q N TH G L +A+DF++ GT V+AAR+G VA VCD F EGG R+ L R+N V IRH DG Y+RY H+ P LV GQ V AGQ IA SGNTGFSS PHLHFD V++ ET RLL P
Sbjct: 45 CVQAENGP-THTGLLAYAYDFEVEEGTPVVAAREGEVAAVCDCFTEGGLRKELKARANHVVIRHA-DGLYSRYYHLQPSSALVCKGQRVTAGQRIAASGNTGFSSGPHLHFDVVDVFNLETCLFRLLPP 171
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A0M0JMK9_9EUKA (M23 family n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JMK9_9EUKA) HSP 1 Score: 129 bits (323), Expect = 5.710e-33 Identity = 79/163 (48.47%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 64 NWMKWASGQGRCIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREG--GTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLSPGG-VFTLPSVAAIFSGPLSVQ 543
+WM + G C+QGN+ TH LR+AFDF L GT +LAA DGIV D R G GT+E + ++N VA+RH G YTRY H+ GV V VG+ V G I LSGNTGFS PHLHFDAV++L ET+ L L G L AA FS L +Q
Sbjct: 48 SWM--LNFDGTCVQGNDGGDTHIDELRYAFDFSLPVGTPILAAADGIVVATVDCHRAGDRGTKEMRI-KANYVALRH-DCGMYTRYYHLCHKGVCVNVGERVHRGMQIGLSGNTGFSGGPHLHFDAVDVLATETATLALEIEGAPARPLECAAASFSAALPLQ 206
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A7S3BY81_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BY81_9EUKA) HSP 1 Score: 127 bits (318), Expect = 4.410e-32 Identity = 65/131 (49.62%), Postives = 84/131 (64.12%), Query Frame = 1
Query: 91 GRCIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLSP 483
G C+QGN ++H L +A+D+ L GT+VLA RDG+VA D+F GG R ++N VAIRH DG Y+RY H+ ++V GQ V GQPIA SGNTG+S+ PHLHFD V+ L E + L L SP
Sbjct: 2 GMCVQGNFGAFSHTDELSYAYDWSLPTGTKVLATRDGVVAAAVDNFTGGGHRLENKAKANYVAIRHV-DGLYSRYYHLQHRSLMVSEGQIVVTGQPIARSGNTGYSAAPHLHFDVVDRLSTEFASLFLTSP 131
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: R1ECT1_EMIHU (Peptidase_M23 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ECT1_EMIHU) HSP 1 Score: 122 bits (306), Expect = 4.260e-30 Identity = 62/129 (48.06%), Postives = 77/129 (59.69%), Query Frame = 1
Query: 88 QGRCIQGNNTEYTHHGYLRHAFDFKLRRGTQVLAARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRL 474
+G +QG + TH L +A+D+ L GT VLAAR G+V CD FR G + P +N V +RH DG Y+RY H+ G + VG V GQPIA SGNTGFSS PHLHFD + P ETS L +
Sbjct: 49 EGMLVQGVDGASTHRDELSYAYDWALAVGTPVLAARAGVVVEACDVFRAGAPKPEYRPLANHVVLRHA-DGLYSRYFHLKQGSLRTSVGAAVSVGQPIAASGNTGFSSGPHLHFDVTDSTPTETSLLSV 176
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Match: A0A7S2HAX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HAX5_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.970e-29 Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 187 AARDGIVAYVCDHFREGGTRERLLPRSNLVAIRHPQDGTYTRYIHIMPGGVLVRVGQEVKAGQPIALSGNTGFSSIPHLHFDAVNILPHETSKLRLLS---PGGVF---TLPSVAAIFS 525
AAR G+VA HF +GG + PR+N +AI+H DGTY RY H+ G +VG +V AGQ +ALSGNTGFSS PHLHFD N+LP +T L + S G V T+P+VAA FS
Sbjct: 1 AARTGVVAAAVAHFDKGGLKNDFRPRANFIAIQHA-DGTYARYFHLQKNGCSAKVGDQVIAGQQVALSGNTGFSSCPHLHFDVTNMLPEDTCHLDIRSREADGAVVSMDTVPAVAAAFS 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig297.8071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig297.8071.1 >prot_H-paniculata_contig297.8071.1 ID=prot_H-paniculata_contig297.8071.1|Name=mRNA_H-paniculata_contig297.8071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp MLEEQNSWRISCVLPFESPKVNWMKWASGQGRCIQGNNTEYTHHGYLRHAback to top mRNA from alignment at H-paniculata_contig297:5461..9790- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig297.8071.1 ID=mRNA_H-paniculata_contig297.8071.1|Name=mRNA_H-paniculata_contig297.8071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4330bp|location=Sequence derived from alignment at H-paniculata_contig297:5461..9790- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig297:5461..9790- >mRNA_H-paniculata_contig297.8071.1 ID=mRNA_H-paniculata_contig297.8071.1|Name=mRNA_H-paniculata_contig297.8071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at H-paniculata_contig297:5461..9790- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |