prot_H-paniculata_contig29631.8052.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29631.8052.1
Unique Nameprot_H-paniculata_contig29631.8052.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig29631.8052.1 vs. uniprot
Match: D7FHJ7_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ7_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.010e-38
Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 0
Query:   51 AAMYEVSPEGEPYSLTAALVEAGPGDTISLADGIYREPIVTVVAGEEGNPLVIEGGPDAVISAFSGDRDLMWSQKVVDVRHSWITLRVRES 141
            AA YEVSP+G+P +LTAAL  AG GDTISL DGIYREP+VT+ AG EGNPLVIEGG DAV++ ++GD+ +MWSQKVVD+RHSW+TLR   +
Sbjct:   51 AATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLRANAN 141          
BLAST of mRNA_H-paniculata_contig29631.8052.1 vs. uniprot
Match: D8LJ28_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ28_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.280e-38
Identity = 75/118 (63.56%), Postives = 89/118 (75.42%), Query Frame = 0
Query:   20 TRTTCASNKTVA-ASLRVLTVVIACILPLIAEAAMYEVSPEGEPYSLTAALVEAGPGDTISLADGIYREPIVTVVAGEEGNPLVIEGGPDAVISAFSGDRDLMWSQKVVDVRHSWITL 136
            T ++  +NKT   A+LR+ T  +A  L     AAMYEVSP+G P +LTAAL  AG GD ISLADGIYREPIVT+ AG EGNPLVI GG  A+I+ FSGDR LMWSQKVVD+RHS++TL
Sbjct:    2 TSSSSCTNKTAGGAALRLATAALAA-LATGTNAAMYEVSPDGSPMTLTAALEVAGAGDIISLADGIYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTL 118          
BLAST of mRNA_H-paniculata_contig29631.8052.1 vs. uniprot
Match: A0A6H5KG59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG59_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 7.770e-38
Identity = 65/87 (74.71%), Postives = 76/87 (87.36%), Query Frame = 0
Query:   51 AAMYEVSPEGEPYSLTAALVEAGPGDTISLADGIYREPIVTVVAGEEGNPLVIEGGPDAVISAFSGDRDLMWSQKVVDVRHSWITLR 137
            AA YEVSP+G+P +LTAAL  AG GDTISL DGIYREP+VT+ AG EGNPLVIEGG DAVI+ ++GD+ +MWSQKVVD+RHSWITLR
Sbjct:   63 AATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRDAVINYYTGDKSIMWSQKVVDIRHSWITLR 149          
BLAST of mRNA_H-paniculata_contig29631.8052.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 4.150e-34
Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 0
Query:   20 TRTTCASNKTVAASLRVLTVVIACILPLIAEAAMYEVSPEGEPYSLTAALVEAGPGDTISLADGIYREPIVTVVAGEEGNPLVIEGGPDAVISAFSGDRDLMWSQKVVDVRHSWITL 136
            T ++C +     A+LR+ T  +A  L     AAMYEVSP+G P +LTAAL  AG GD +SLADG YREPIVT+ AG EGNPLVI GG  A+I+ FSGDR LMWSQKVVD+RHS++TL
Sbjct:    2 TSSSCTNKTAGVAALRLATAALAA-LATGTNAAMYEVSPDGNPMTLTAALEVAGAGDIVSLADGTYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTL 117          
BLAST of mRNA_H-paniculata_contig29631.8052.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.960e-34
Identity = 62/87 (71.26%), Postives = 75/87 (86.21%), Query Frame = 0
Query:   51 AAMYEVSPEGEPYSLTAALVEAGPGDTISLADGIYREPIVTVVAGEEGNPLVIEGGPDAVISAFSGDRDLMWSQKVVDVRHSWITLR 137
            AA YEVSP+G+P +L AAL  AG GDTISL DGIYREP+VT+ AG EGNPLVIEGG DAV++ ++GD+ +MWSQKVVD+RHSW+TLR
Sbjct:   78 AATYEVSPDGDPMTLAAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLR 164          
BLAST of mRNA_H-paniculata_contig29631.8052.1 vs. uniprot
Match: A0A6G4WWI2_9ACTN (Sheath polysaccharide-degrading enzyme n=1 Tax=Streptomyces boncukensis TaxID=2711219 RepID=A0A6G4WWI2_9ACTN)

HSP 1 Score: 52.4 bits (124), Expect = 3.990e-5
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:   65 LTAALVEAGPGDTISLADGIYREPIVTVVAGEEGNPLVIEGGPDAVISAFSG 116
            L  AL +A  GDTI LADG+YR    T  AG  G+P+ + G PDAV++A  G
Sbjct:   43 LKDALAQARGGDTIRLADGVYRGNFKTSRAGGAGSPVTLTGSPDAVLTAGGG 94          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29631.8052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FHJ7_ECTSI1.010e-3869.23EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LJ28_ECTSI2.280e-3863.56EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KG59_9PHAE7.770e-3874.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1D2_9PHAE4.150e-3460.68Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D8LJ42_ECTSI4.960e-3471.26FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6G4WWI2_9ACTN3.990e-550.00Sheath polysaccharide-degrading enzyme n=1 Tax=Str... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 61..137
e-value: 2.6E-8
score: 35.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 40..136
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29631contigH-paniculata_contig29631:1160..1600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29631.8052.1mRNA_H-paniculata_contig29631.8052.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29631 1160..1600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29631.8052.1 ID=prot_H-paniculata_contig29631.8052.1|Name=mRNA_H-paniculata_contig29631.8052.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MTTATDLRRQQGRQHQQHDTRTTCASNKTVAASLRVLTVVIACILPLIAE
AAMYEVSPEGEPYSLTAALVEAGPGDTISLADGIYREPIVTVVAGEEGNP
LVIEGGPDAVISAFSGDRDLMWSQKVVDVRHSWITLRVRESLCVYQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence