prot_H-paniculata_contig2961.8047.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2961.8047.1
Unique Nameprot_H-paniculata_contig2961.8047.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length131
Homology
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BLAST of mRNA_H-paniculata_contig2961.8047.1 vs. uniprot
Match: D8LG89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG89_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 2.010e-36
Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 0 
Query:   14 SRCCIGLSIPGMIFLSIVGFLFDAQPLYTSVDVDDPESASLNCYLAALLYAIAILLSCVGIQYEKKSRTRYNVMQDE-QFGEERAELLGVTDSGYGALSSLSQMPVMPQGYSRSSQNI 130
            +R CIGLSIPG+IFL I+G +FD Q  YTSV+VDDP +A+  CY AALLY +AI +S  GI Y+K  R      Q+E   G+E + LLG  DSGYG+L+ LSQMP+MPQGYSRS   +
Sbjct:    8 ARVCIGLSIPGIIFLIIIGIMFDKQGFYTSVEVDDPTAAASECYFAALLYVVAIGVSLGGICYDKNRRGMLVTTQEELAHGDESSGLLGREDSGYGSLTYLSQMPLMPQGYSRSDNYV 125
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BLAST of mRNA_H-paniculata_contig2961.8047.1 vs. uniprot
Match: A0A836CCG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG9_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.100e-10
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 0 
Query:   14 SRCCIGLSIPGMIFLSIVGFLFDAQPLYTSVDV---DDPESASLNCYLAALLYAIAILLSCVGIQYEKKSRTRYNVMQDEQFGEERAEL 99
            S+CC  LS  G++FL+I+G LF+ QP +T+ +V   D  E A+   Y  A +Y I +L+S  G+ Y K+   +YN   + QF  E A L
Sbjct:    8 SQCCCLLSGMGIVFLTILGILFEEQPFFTNPEVYHKDGSEEAAEAVYWGAFIYFITLLMSLYGMWYSKRRSAQYN---EAQFDHELAPL 93
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2961.8047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG89_ECTSI2.010e-3656.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CCG9_9STRA3.100e-1039.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..37
NoneNo IPR availableTMHMMTMhelixcoord: 55..74
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2961contigH-paniculata_contig2961:2212..10874 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2961.8047.1mRNA_H-paniculata_contig2961.8047.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2961 919..10920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2961.8047.1 ID=prot_H-paniculata_contig2961.8047.1|Name=mRNA_H-paniculata_contig2961.8047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
MTTEWPGVRTKKGSRCCIGLSIPGMIFLSIVGFLFDAQPLYTSVDVDDPE
SASLNCYLAALLYAIAILLSCVGIQYEKKSRTRYNVMQDEQFGEERAELL
GVTDSGYGALSSLSQMPVMPQGYSRSSQNI*
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