prot_H-paniculata_contig29560.8039.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29560.8039.1
Unique Nameprot_H-paniculata_contig29560.8039.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: A0A6H5JAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAM1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 4.530e-22
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    5 CICFGQVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
            C     +GI+Q F+H  TAALYP  PL +A+  +L PRFDRA+RRLFRIYD D DGLL D ELN+FQ+ +FRL LS  D+  L+++
Sbjct:  154 CSAVSGMGINQAFYHGRTAALYPRAPLYNAEEGRLCPRFDRAMRRLFRIYDVDRDGLLCDDELNAFQFHAFRLLLSASDLESLRKI 239          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: D8LB08_ECTSI (Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB08_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 8.610e-22
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    5 CICFGQVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
            C     +GI+Q F+H  TAALYP  PL +A+  +L PRFDRA+RRLFRI+D D DGLL + ELN+FQ+ +FRL LSD D+  L+++
Sbjct:  154 CSSVSGMGINQAFYHGRTAALYPRAPLYNAEEGRLCPRFDRAMRRLFRIHDVDRDGLLRNDELNAFQFHAFRLLLSDSDLESLRKI 239          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: A0A7S3V0N8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V0N8_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.340e-18
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0
Query:   10 QVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
             + +S++FH A  + LYP+ PL D KT +LRP+F +A+ R+FRI+D D DGLL D ELN+FQ   F + L+  DI  +K V
Sbjct:  206 NMNVSEIFHMAQHSVLYPLAPLFDTKTKELRPKFKKALCRVFRIFDMDRDGLLSDSELNNFQERCFGVRLTPTDIEQVKSV 286          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: A0A5J4YMH2_PORPP (Mitochondrial Rho GTPase 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMH2_PORPP)

HSP 1 Score: 82.4 bits (202), Expect = 4.000e-16
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0
Query:   13 ISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
            +++VF+ A  + L+P  PL D  T+ LRP+   A+ R+FR+ D+DGDGLL D+ELN FQY+ F + L DE++  +K V
Sbjct:  157 VAEVFYFAQKSVLHPTAPLYDVSTHALRPKTVAALTRVFRLCDKDGDGLLNDKELNDFQYQCFNVMLRDEELAGVKNV 234          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: A0A7S2SMD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SMD2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.210e-15
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   10 QVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
             + +S+VF  A  A +YPI PL D +T +L+P+F  A+RR+FRI+D+D DG+L D ELN FQ   F   L   DI  +K V
Sbjct:  171 NINVSEVFSLAQQAVVYPISPLFDTQTLELQPKFKTALRRVFRIFDQDRDGVLSDIELNDFQETCFGARLQPSDIEDVKAV 251          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: A0A7S2WS27_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WS27_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.590e-15
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   10 QVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
             + +S+VF  A  A +YPI PL D +T +L+P+F  A+RR+FRI+D+D DG+L D ELN FQ   F   L   DI  +K V
Sbjct:  171 NINVSEVFSLAQQAVVYPISPLFDTQTLELQPKFKTALRRVFRIFDQDRDGVLSDIELNDFQETCFGARLQPSDIEDVKAV 251          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: R7QM49_CHOCR (Mitochondrial Rho GTPase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM49_CHOCR)

HSP 1 Score: 79.3 bits (194), Expect = 4.760e-15
Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
Query:   13 ISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
            IS+VF+ A  A LYP GP+ D +T  L+P    A+RR+F+I D+DGDG L D+ELN FQ+  F ++L   ++  +K+V
Sbjct:  160 ISEVFYFAQKAVLYPTGPVYDVETQSLKPPASAALRRIFKICDKDGDGGLNDKELNDFQFTCFNVHLKPAELDGVKKV 237          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: A0A7S2EWI8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWI8_TRICV)

HSP 1 Score: 79.0 bits (193), Expect = 6.570e-15
Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 0
Query:   11 VGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQVGEFNS 95
            + + +VF  A  A LYPI PL D +  Q+ P   RA+ R+FR+YDRD DGLL + ELN+FQ  +F++ L++ D+   K+V   N+
Sbjct:   72 LNVDEVFLKARQAVLYPITPLYDLEEGQIAPNCRRALTRIFRMYDRDNDGLLSNAELNAFQKRAFQVPLAERDLTGWKKVVSKNN 156          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: A0A396HPX0_MEDTR (Mitochondrial Rho GTPase n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396HPX0_MEDTR)

HSP 1 Score: 77.4 bits (189), Expect = 2.260e-14
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    3 FSCICFGQVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
            F C  +  + + +VF+ A  AALYP+ PL D K++ L+PR +RA++R+F + D D DG L D ELN+FQ   F   +   +I  +K+V
Sbjct:  120 FECSAYRLIQVLEVFYFAQKAALYPMAPLFDQKSHTLKPRCERALKRIFTLCDHDRDGALSDAELNNFQAVCFNAPMQPWEIANVKKV 207          
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Match: G7KF84_MEDTR (Mitochondrial Rho GTPase n=2 Tax=Medicago truncatula TaxID=3880 RepID=G7KF84_MEDTR)

HSP 1 Score: 77.4 bits (189), Expect = 2.260e-14
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    3 FSCICFGQVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRLFRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQV 90
            F C  +  + + +VF+ A  AALYP+ PL D K++ L+PR +RA++R+F + D D DG L D ELN+FQ   F   +   +I  +K+V
Sbjct:  157 FECSAYRLIQVLEVFYFAQKAALYPMAPLFDQKSHTLKPRCERALKRIFTLCDHDRDGALSDAELNNFQAVCFNAPMQPWEIANVKKV 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29560.8039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAM1_9PHAE4.530e-2255.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB08_ECTSI8.610e-2254.65Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculo... [more]
A0A7S3V0N8_9STRA2.340e-1848.15Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A5J4YMH2_PORPP4.000e-1646.15Mitochondrial Rho GTPase 1 n=1 Tax=Porphyridium pu... [more]
A0A7S2SMD2_9STRA2.210e-1546.91Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S2WS27_9STRA2.590e-1546.91Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
R7QM49_CHOCR4.760e-1546.15Mitochondrial Rho GTPase n=1 Tax=Chondrus crispus ... [more]
A0A7S2EWI8_TRICV6.570e-1543.53Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A396HPX0_MEDTR2.260e-1440.91Mitochondrial Rho GTPase n=1 Tax=Medicago truncatu... [more]
G7KF84_MEDTR2.260e-1440.91Mitochondrial Rho GTPase n=2 Tax=Medicago truncatu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 35..103
e-value: 1.6E-12
score: 49.6
NoneNo IPR availablePANTHERPTHR24072RHO FAMILY GTPASEcoord: 9..91
NoneNo IPR availablePANTHERPTHR24072:SF73MITOCHONDRIAL RHO GTPASEcoord: 9..91
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 55..67
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 42..77
score: 8.488
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 29..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29560contigH-paniculata_contig29560:502..1682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29560.8039.1mRNA_H-paniculata_contig29560.8039.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29560 502..1682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29560.8039.1 ID=prot_H-paniculata_contig29560.8039.1|Name=mRNA_H-paniculata_contig29560.8039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
LLFSCICFGQVGISQVFHHALTAALYPIGPLLDAKTNQLRPRFDRAIRRL
FRIYDRDGDGLLGDQELNSFQYESFRLNLSDEDIVVLKQVGEFNSGGCNG
DNGCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair