prot_H-paniculata_contig2950.8026.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2950.8026.1
Unique Nameprot_H-paniculata_contig2950.8026.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length234
Homology
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: A0A6H5LLH5_9PHAE (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLH5_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 6.180e-117
Identity = 177/235 (75.32%), Postives = 207/235 (88.09%), Query Frame = 0
Query:    1 VGEVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATV-MLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGE-HGIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDLS 233
            VG+VRRALS+++ERLE NR + +E +L GELEYLEG+S+E  FWN+A SARK LGD+NRLK+Q++RL  WR WEADAETVIELCGE  EGDD+ T  MLDEA EA++LLQ+DLD+WE++QLLSGKYD CGCRLTI AGAGG +A DWA MLQRMY+R+F+RR FKY IVEEE+GE  GIKSCE+QVEG+FAYGYLAGEKGTHRLVRQSPFNAQ+KRQTSFAGVES PIIEQ+DLS
Sbjct:   85 VGDVRRALSSARERLEKNRQLFDEARLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLYRWRGWEADAETVIELCGEE-EGDDEETAAMLDEATEALQLLQRDLDAWEMQQLLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKIVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLS 318          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: D7FJS9_ECTSI (Peptide chain release factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS9_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 3.790e-114
Identity = 174/234 (74.36%), Postives = 204/234 (87.18%), Query Frame = 0
Query:    1 VGEVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGE-HGIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDLS 233
            VG+VRR LS+++ERL  NR + +E KL GELEYLEG+S+E  FWN+A SARK LGD+NRLK+Q++RL  WR WEADAETVIELCGE   GD++   MLDEAMEA++LLQ+DLD+WEL+QLLSGKYD CGCRLTI AGAGG +A DWA MLQRMY+R+F+RR FKY +VEEE+GE  GIKSCE+QVEG+FAYGYLAGEKGTHRLVRQSPFNAQ+KRQTSFAGVES PIIEQ+DLS
Sbjct:   87 VGDVRRGLSSARERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWRGWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLS 320          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: A0A835Z7S5_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S5_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.580e-79
Identity = 126/210 (60.00%), Postives = 155/210 (73.81%), Query Frame = 0
Query:   26 KLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEG--DDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGE-HGIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDL 232
            KL GEL YLEG+ +E GFW++A +ARK L +  RLK QV+RL+ W  W  D E+ +EL  + G+   D +A  + +EA   +    KDLD+WELE+LLSGK+D  G +LTI AGAGG +A DWALMLQRMY RYF+R+ F Y ++EEE GE  GIKSC I VEG   YG LAGEKGTHRLVRQSPFNAQ+KRQTSFAGVE+ P++E EDL
Sbjct:    5 KLTGELAYLEGVCSEAGFWDDAAAARKTLAESTRLKSQVDRLDRWAAWGGDVESALELLAD-GDALSDAEAVALAEEAAATLDAWAKDLDTWELERLLSGKFDNAGTQLTIQAGAGGTEAQDWALMLQRMYTRYFQRKGFSYKLIEEEPGEVAGIKSCRIDVEGPLCYGLLAGEKGTHRLVRQSPFNAQAKRQTSFAGVETFPVLELEDL 213          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: A0A7S2UWG0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG0_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.410e-71
Identity = 115/233 (49.36%), Postives = 163/233 (69.96%), Query Frame = 0
Query:    1 VGEVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGEH-GIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDL 232
            +  +++ L    ER+E N  ++    L+GE++ LEG ++E   W++    + +   +  LK ++E+ E W+RW+ D ET  EL  +     ++A ++++EA++  R LQKDLDS+ELEQ+L G YD C CRLTI AGAGG DA DWA ML RMY RY ER+ ++ T+++E  GE  GIKS E+++ G FAYG LAGEKGTHRLVR SPFN+ +KRQTSFAGVE++PI+EQ+DL
Sbjct:   84 ISSLKKDLQGFHERIERNVDLVGILALKGEIKDLEGQASESSLWDDPARGQALTSKLGFLKGRLEQTERWQRWQGDIETACELGADPDLDSEEAAMLVEEALDISRNLQKDLDSFELEQMLGGPYDNCPCRLTIQAGAGGTDAQDWAAMLLRMYRRYAERQGYQVTLIDEMEGEEAGIKSAELEITGPFAYGRLAGEKGTHRLVRLSPFNSSNKRQTSFAGVETIPIVEQDDL 316          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: A0A7S1T7C5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7C5_9RHOD)

HSP 1 Score: 219 bits (558), Expect = 2.250e-66
Identity = 109/237 (45.99%), Postives = 160/237 (67.51%), Query Frame = 0
Query:    1 VGEVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEV---GEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGEH-GIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDLS 233
            VGE+RR LS  +ER+E N G  +    R  +  LE ++AE  FW +AV A++ +  +N  +  ++    WR+   D E  +EL G+    G GD++   +L+EAM+ +R +  +L+ WE+ ++ SG YD CG  +T+ AGAGGVDA DWA ML+RMY+R+ ER+ ++  +VEE  GE  GIKS  +++ GE+AYGY++ EKGTHRLVR SPFNAQ KRQTSFAGVE +P++E + ++
Sbjct:   22 VGEIRRRLSGVRERVEQNEGDADLDVFRAAVRELEAMTAEPDFWEDAVQAQRTMQRLNANRQVLDSYAKWRQVLQDTEATLELVGDDAGDGGGDEEVQSLLEEAMKDLRSVDSELEQWEIRKMFSGDYDRCGAVVTVLAGAGGVDAQDWAEMLKRMYIRWAERQGYRVEVVEESEGEEAGIKSVTLEISGEYAYGYVSAEKGTHRLVRISPFNAQGKRQTSFAGVEVMPLLEDDQVN 258          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: UPI001688801F (peptide chain release factor 2 n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI001688801F)

HSP 1 Score: 206 bits (525), Expect = 8.230e-62
Identity = 114/227 (50.22%), Postives = 148/227 (65.20%), Query Frame = 0
Query:    3 EVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGEH-GIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIE 228
            E++R +    ERL   +  L+ P L   ++ LE L+A+  FWN+   A+K L D+N LK  V +L++WR    D   V+EL  E+ E DD    +L EA++ V  L  DLD WELEQLLSG YD  G  LTINAGAGG DA DWA ML RMY R+ E+  +K  + E   GE  G+KS  ++++G +AYGYL+ EKGTHRLVR SPFNA  KRQTSFAGVE +P+I+
Sbjct:    5 ELKREVETLSERLGKTQDYLDLPALNARIQDLEQLAAQPEFWNDQFQAQKTLQDLNDLKSNVSQLDHWRSSLEDTRAVLELL-EL-EADD---ALLTEAVQTVHKLSSDLDRWELEQLLSGLYDDKGAILTINAGAGGTDAQDWAEMLLRMYTRWAEKHNYKVHLAEISEGEEAGLKSATLEIDGRYAYGYLSAEKGTHRLVRISPFNANDKRQTSFAGVEIMPLID 226          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: UPI0016835605 (peptide chain release factor 2 n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016835605)

HSP 1 Score: 205 bits (522), Expect = 2.380e-61
Identity = 110/235 (46.81%), Postives = 157/235 (66.81%), Query Frame = 0
Query:    1 VGEVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWR-RWEADAETVIELCGEVGEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVE-EEAGEHGIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDLS 233
            + +++R L     RL   +  L+ P L  ++  LE  +A+  FW++  SA+K L  +N LK  +E+++ W+  WE D+  + EL     E +DD T +L+EA   ++ L++DLD WEL+QLLSG+YD+ G  LTINAGAGG DA DWA ML RMY R+ E++ +K  + E  E  E GIKS  ++++G +AYGYL GEKGTHRLVR SPFNA  KRQTSFAGVE +P +E+ +++
Sbjct:    3 ITDLKRDLQTIATRLGKTQDYLDLPALNAQIHDLEQSAAQPNFWDDQTSAQKTLQRLNDLKSNLEQMQQWQSEWE-DSSAIAELL----EQEDDQT-LLEEAASTLQRLERDLDRWELQQLLSGQYDSAGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAELSEGDEAGIKSVTLEIDGRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEIMPALEENEIA 231          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: A0A0G4ETN2_VITBC (RF_PROK_I domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETN2_VITBC)

HSP 1 Score: 207 bits (526), Expect = 7.140e-61
Identity = 105/233 (45.06%), Postives = 151/233 (64.81%), Query Frame = 0
Query:    1 VGEVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGEH-GIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDL 232
            V EV+R L   +ER + N  + + P +  E++ ++  + +E FW++   A K+   + RLK     +E WRR   DAE  I+        D +    L E++  ++ L + +DSWELE+L+ G YD  GCRL + AGAGG ++ DWA ML RMYLR+ +R+ ++  +V+   GE  GIKS E+++EGE+AYG L+GEKGTHRLVR SPFNAQ KRQTSFAGVE++PI+  ED+
Sbjct:   81 VNEVKRTLDTLRERYDRNVELADLPSIGREMDSIQRETTKEDFWDDPARASKLSARLQRLKESRSSVEGWRRSLEDAEAAIDFVTSEELSDAERNEFLAESVTTMKRLSRHMDSWELEKLMDGPYDRVGCRLYVTAGAGGTESCDWADMLLRMYLRFAQRKGWRARVVDRSDGEEAGIKSAEVEIEGEYAYGLLSGEKGTHRLVRISPFNAQGKRQTSFAGVETMPILPDEDV 313          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: A0A4D9D036_9STRA (RF_PROK_I domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D036_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.400e-60
Identity = 113/232 (48.71%), Postives = 150/232 (64.66%), Query Frame = 0
Query:    3 EVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGEHG--IKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQEDL 232
            E++RAL+ +   +E N   LN PK+ GE++Y E  +A+E FW     AR+ +  +  L+  V R++ WRR   D  T + L  E G G++       E  + +R LQ+DL +WE++QLLSG YDACGCR+ I AGAGG DA DWA ML RMYLRY ER+ +K  ++E++    G  IK   ++VEGE AYG L  E+GTHRLVR SPFNA  KRQTSFAGVE +PI+  E L
Sbjct:   80 ELKRALAEAARAIEANTAALNLPKIMGEIDYCEQEAAQESFWERPGEAREKMSVLAGLQGTVARVDRWRRLYEDVATALALWEEGG-GEEWGV----EGKDGMRKLQQDLVTWEVDQLLSGPYDACGCRVAITAGAGGTDASDWAGMLLRMYLRYGERKGWKLRMLEKQVSTEGVGIKGALLEVEGEKAYGLLKAEEGTHRLVRISPFNAAGKRQTSFAGVEVMPILSDERL 306          
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Match: A0A4P7ZWS6_9SYNE (Peptide chain release factor 2 n=31 Tax=Cyanobacteria TaxID=1117 RepID=A0A4P7ZWS6_9SYNE)

HSP 1 Score: 202 bits (515), Expect = 3.120e-60
Identity = 112/229 (48.91%), Postives = 151/229 (65.94%), Query Frame = 0
Query:    3 EVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSARKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATVMLDEAMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALMLQRMYLRYFERRRFKYTIVEEEAGEH-GIKSCEIQVEGEFAYGYLAGEKGTHRLVRQSPFNAQSKRQTSFAGVESLPIIEQE 230
            + +R LS   +RL   +  L+ P L+   + LE L+++  FW++   A+  +  ++ +K Q+E+L  W+   ADAE  +E+ G   E D++   +L E+ EA++ L+ DLD WELE+LLSG YD  G  ++INAGAGG DA DWALML RMY R+ E    K T+ E   GE  GIKSC I++EG +AYGYL  EKGTHRLVR SPFNA  KRQTSFAGVE +P IE+E
Sbjct:    6 DFKRDLSELTDRLGNAQDCLDVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAEATVEIYGL--EPDEE---LLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDAQDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGVEVMPKIEEE 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2950.8026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LLH5_9PHAE6.180e-11775.32RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
D7FJS9_ECTSI3.790e-11474.36Peptide chain release factor n=1 Tax=Ectocarpus si... [more]
A0A835Z7S5_9STRA2.580e-7960.00RF_PROK_I domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2UWG0_9STRA1.410e-7149.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1T7C5_9RHOD2.250e-6645.99Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
UPI001688801F8.230e-6250.22peptide chain release factor 2 n=1 Tax=Leptolyngby... [more]
UPI00168356052.380e-6146.81peptide chain release factor 2 n=1 Tax=Oscillatori... [more]
A0A0G4ETN2_VITBC7.140e-6145.06RF_PROK_I domain-containing protein n=1 Tax=Vitrel... [more]
A0A4D9D036_9STRA1.400e-6048.71RF_PROK_I domain-containing protein n=3 Tax=Monodo... [more]
A0A4P7ZWS6_9SYNE3.120e-6048.91Peptide chain release factor 2 n=31 Tax=Cyanobacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availableGENE3D1.20.58.410coord: 7..125
e-value: 6.1E-12
score: 47.6
NoneNo IPR availableGENE3D3.30.70.1660coord: 127..233
e-value: 8.3E-36
score: 124.9
NoneNo IPR availablePANTHERPTHR43116:SF3PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTICcoord: 3..231
NoneNo IPR availablePANTHERPTHR43116FAMILY NOT NAMEDcoord: 3..231
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 27..229
IPR005139Peptide chain release factorSMARTSM00937PCRF_a_2coord: 86..196
e-value: 3.5E-33
score: 126.2
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 29..221
e-value: 1.3E-47
score: 162.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2950contigH-paniculata_contig2950:768..6717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2950.8026.1mRNA_H-paniculata_contig2950.8026.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2950 768..6717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2950.8026.1 ID=prot_H-paniculata_contig2950.8026.1|Name=mRNA_H-paniculata_contig2950.8026.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
VGEVRRALSASQERLEMNRGILNEPKLRGELEYLEGLSAEEGFWNEAVSA
RKVLGDMNRLKVQVERLENWRRWEADAETVIELCGEVGEGDDDATVMLDE
AMEAVRLLQKDLDSWELEQLLSGKYDACGCRLTINAGAGGVDAMDWALML
QRMYLRYFERRRFKYTIVEEEAGEHGIKSCEIQVEGEFAYGYLAGEKGTH
RLVRQSPFNAQSKRQTSFAGVESLPIIEQEDLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF