prot_H-paniculata_contig2945.8016.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2945.8016.1
Unique Nameprot_H-paniculata_contig2945.8016.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length352
Homology
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BLAST of mRNA_H-paniculata_contig2945.8016.1 vs. uniprot
Match: D7G8Y2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y2_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 2.990e-17
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0 
Query:    1 MKFLRCSRCRRGCCGDCFRRLPVYCRGPRVVVPVCRDCFRPLDFENRWHNHLVITNRER------------CGSQDDPLPGGEYSASPRRSS 80
            ++  RC+RCR+GCC  C + LP +CRGP++V+PVC  C R +DFENRWH+HL+ T+R+R             G ++    G   S SPR  S
Sbjct:  420 VEMARCARCRKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHLPAAAGQREQGGGGRSRSVSPRADS 511
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BLAST of mRNA_H-paniculata_contig2945.8016.1 vs. uniprot
Match: A0A6H5KGA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA5_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 5.190e-14
Identity = 56/146 (38.36%), Postives = 72/146 (49.32%), Query Frame = 0 
Query:   10 RRGCCGDCFRRLPVYCRGPRVVVPVCRDCFRPLDFENRWHNHLVITNRER----------CGSQDDPLPGGEY--SASPRRSS--GS--------RFRVAKEGTVNIRLEPDQPSAAWRATNSAASFL--------RRSLSSGGDL 125
            R+GCC  C + LP +CRGP++V+PVC  C R +DFENRWH+HL+ T+R+R            + +    GGE   S SPR  S  GS        R     +G    RL      A  +A  S +S L        RRSLSSG  L
Sbjct: 1126 RKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHLSAAAGERKQGGGERPRSVSPRADSACGSSPGQSPKRRSEAGADGKRGARLR-GSGRAEQKALGSTSSSLLRAPSRLIRRSLSSGSSL 1270
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2945.8016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8Y2_ECTSI2.990e-1743.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGA5_9PHAE5.190e-1438.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2945contigH-paniculata_contig2945:4357..6696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2945.8016.1mRNA_H-paniculata_contig2945.8016.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2945 4357..6724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2945.8016.1 ID=prot_H-paniculata_contig2945.8016.1|Name=mRNA_H-paniculata_contig2945.8016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MKFLRCSRCRRGCCGDCFRRLPVYCRGPRVVVPVCRDCFRPLDFENRWHN
HLVITNRERCGSQDDPLPGGEYSASPRRSSGSRFRVAKEGTVNIRLEPDQ
PSAAWRATNSAASFLRRSLSSGGDLLASDTRRPLTLPVRVARSTSASASA
WSTVGSSLGSAFNALSSPSSTLVAVTNSSTAAATRGERPATTRSRGSVMA
SLTSAFASHGGVVVAPSPSPRSNASGSPDSVSPTPPVSTVLGKTVSLDTG
ISRSWSGRPRGGGGHPVISTAVDLFGVGAYGGGAAIAVGTGDRVSSIQEQ
GRHPSECPCGATALYCEVIGVCPKALTTTASVVSVAAADSTGVVEAEGAE
AA
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