prot_H-paniculata_contig29429.8012.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29429.8012.1
Unique Nameprot_H-paniculata_contig29429.8012.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
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BLAST of mRNA_H-paniculata_contig29429.8012.1 vs. uniprot
Match: D8LTL8_ECTSI (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL8_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-13
Identity = 43/73 (58.90%), Postives = 49/73 (67.12%), Query Frame = 0 
Query:   13 VRIMVEGGGGTGGKAARTLVHRAVQEVFPFVKTTTERRQGGDGDDVTVVCSQGATLPKLRELLSTDDVEALQR 85
            V + V  G G   KAAR  VHRAVQE FPF+KTTTE+   G    VTVVC+Q + LP LR LLS  D+EALQR
Sbjct:  198 VLVWVHAGQGAD-KAARARVHRAVQETFPFIKTTTEKAPDGS---VTVVCTQASPLPALRGLLSGPDLEALQR 266
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29429.8012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTL8_ECTSI1.300e-1358.90TRUD domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29429contigH-paniculata_contig29429:185..2415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29429.8012.1mRNA_H-paniculata_contig29429.8012.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29429 159..2433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29429.8012.1 ID=prot_H-paniculata_contig29429.8012.1|Name=mRNA_H-paniculata_contig29429.8012.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
MTEEDTAGGPLLVRIMVEGGGGTGGKAARTLVHRAVQEVFPFVKTTTERR
QGGDGDDVTVVCSQGATLPKLRELLSTDDVEALQR*
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