mRNA_H-paniculata_contig2940.8010.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig2940.8010.1
Unique Name	mRNA_H-paniculata_contig2940.8010.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A6H5KIR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR9_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.100e-18
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 3

Query:   18 MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLPSESSTSIQSG 170
            MYCGDEVA IVGDIGA+TCKFGYGGE+SPKHVF STAGYLP    TSI+ G
Sbjct:    1 MYCGDEVATIVGDIGADTCKFGYGGEDSPKHVFLSTAGYLPGN--TSIKEG 49

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: D8LII8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LII8_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 2.230e-13
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 3

Query:   30 DEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLPSESSTSIQSG 170
            DEVA IVGDIGA+TCKFGYGGE+SPKHVF STAGYLP    TSI+ G
Sbjct:   12 DEVATIVGDIGADTCKFGYGGEDSPKHVFLSTAGYLPGN--TSIKEG 56

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A835YRK8_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.450e-11
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 3

Query:   18 MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLP 140
            MYCGDE+A +VGD+G   CKFGY GE+ PKH+F S AGYLP
Sbjct:    1 MYCGDEIAGVVGDVGTCHCKFGYAGEDVPKHMFRSAAGYLP 41

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A7N0T7I3_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0T7I3_KALFE)

HSP 1 Score: 56.2 bits (134), Expect = 2.790e-7
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 3

Query:   18 MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYL 137
            MY GDEV+AIV D+G+ TCK GY GE++PK VF S AGY+
Sbjct:    1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVAGYI 40

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A1Y1ILU8_KLENI (Actin-related protein 4-ARP4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILU8_KLENI)

HSP 1 Score: 55.1 bits (131), Expect = 7.150e-7
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 3

Query:   12 AAMYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLP 140
            A+MY GDEV+AIV D+G+ TCK GY GE++PK VF S  G +P
Sbjct:   30 ASMYGGDEVSAIVVDVGSHTCKAGYAGEDAPKAVFPSVVGAVP 72

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A6A5MWM5_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5MWM5_LUPAL)

HSP 1 Score: 52.4 bits (124), Expect = 8.230e-7
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 3

Query:   18 MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYL 137
            MY GDEV+AIV D+G+ TCK GY GE++PK +F S AG +
Sbjct:    1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAIFPSVAGAI 40

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A7S1TUK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUK5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 8.280e-7
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 3

Query:   18 MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLP 140
            MYCGDE++A+V D+G E+ +FGYGGE+ PK V  +  G  P
Sbjct:    1 MYCGDEISALVADVGTESARFGYGGEDGPKAVVPTAEGRTP 41

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: C1EDX6_MICCC (Actin superfamily n=2 Tax=Micromonas TaxID=38832 RepID=C1EDX6_MICCC)

HSP 1 Score: 54.3 bits (129), Expect = 1.330e-6
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 3

Query:   18 MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLPSESSTSIQSGGRHVNME 191
            MY GDEV+AIV D+G+ T K GY GE++PK VF ST G+L  +  ++ +  G  V M+
Sbjct:    1 MYGGDEVSAIVVDLGSSTVKAGYAGEDTPKAVFPSTVGWLAKDQESAGKKDGGDVEMK 58

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A0P1AS26_PLAHL (Actin-related protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AS26_PLAHL)

HSP 1 Score: 54.3 bits (129), Expect = 1.340e-6
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 3

Query:    3 LYR-AAMYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLP 140
            +YR +AMYCGD+V AIVGD+G+   KFG  GE++P+ VF S  G  P
Sbjct:   21 VYRNSAMYCGDDVEAIVGDVGSALSKFGMAGEDTPQRVFPSVVGLYP 67

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BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Match: A0A5B7CEI7_DAVIN (Putative Actin-related protein 4 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7CEI7_DAVIN)

HSP 1 Score: 52.4 bits (124), Expect = 1.470e-6
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 3

Query:   18 MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYL 137
            MY GDEV+AIV D+G+ TCK GY GE+SPK VF S  G +
Sbjct:    1 MYGGDEVSAIVIDLGSHTCKAGYAGEDSPKAVFPSVVGLI 40

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2940.8010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KIR9_9PHAE	1.100e-18	80.39	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D8LII8_ECTSI	2.230e-13	78.72	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YRK8_9STRA	4.450e-11	68.29	Actin family n=1 Tax=Tribonema minus TaxID=303371 ...	[more]
A0A7N0T7I3_KALFE	2.790e-7	65.00	Uncharacterized protein n=1 Tax=Kalanchoe fedtsche...	[more]
A0A1Y1ILU8_KLENI	7.150e-7	60.47	Actin-related protein 4-ARP4 n=1 Tax=Klebsormidium...	[more]
A0A6A5MWM5_LUPAL	8.230e-7	60.00	Uncharacterized protein n=1 Tax=Lupinus albus TaxI...	[more]
A0A7S1TUK5_9STRA	8.280e-7	53.66	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
C1EDX6_MICCC	1.330e-6	48.28	Actin superfamily n=2 Tax=Micromonas TaxID=38832 R...	[more]
A0A0P1AS26_PLAHL	1.340e-6	55.32	Actin-related protein n=1 Tax=Plasmopara halstedii...	[more]
A0A5B7CEI7_DAVIN	1.470e-6	62.50	Putative Actin-related protein 4 (Fragment) n=1 Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2940	contig	H-paniculata_contig2940:12449..16605 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	74.3
Seed ortholog evalue	2.8e-11
Seed eggNOG ortholog	2880.D8LII8
Preferred name	ACTL6A
KEGG ko	ko:K05692,ko:K11340,ko:K11400,ko:K11652,ko:K11767
KEGG Pathway	ko04015,ko04145,ko04210,ko04390,ko04391,ko04510,ko04520,ko04530,ko04611,ko04670,ko04714,ko04745,ko04810,ko04919,ko04921,ko05100,ko05110,ko05130,ko05131,ko05132,ko05164,ko05205,ko05225,ko05410,ko05412,ko05414,ko05416,ko05418,map04015,map04145,map04210,map04390,map04391,map04510,map04520,map04530,map04611,map04670,map04714,map04745,map04810,map04919,map04921,map05100,map05110,map05130,map05131,map05132,map05164,map05205,map05225,map05410,map05412,map05414,map05416,map05418
Hectar predicted targeting category	other localisation
GOs	GO:0000123,GO:0000228,GO:0000278,GO:0000281,GO:0000785,GO:0000790,GO:0000812,GO:0000902,GO:0000904,GO:0000910,GO:0001654,GO:0003407,GO:0003674,GO:0003682,GO:0003712,GO:0003713,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006333,GO:0006337,GO:0006338,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006464,GO:0006473,GO:0006475,GO:0006508,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007049,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0007423,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016043,GO:0016070,GO:0016358,GO:0016514,GO:0016569,GO:0016570,GO:0016573,GO:0016579,GO:0016586,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0021510,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023052,GO:0030030,GO:0030154,GO:0030182,GO:0031011,GO:0031175,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031491,GO:0031493,GO:0031498,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032984,GO:0032986,GO:0032989,GO:0032990,GO:0032991,GO:0033202,GO:0033554,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035060,GO:0035267,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0042393,GO:0042766,GO:0043010,GO:0043044,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043933,GO:0043967,GO:0043968,GO:0043981,GO:0043982,GO:0043983,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051301,GO:0051382,GO:0051383,GO:0051716,GO:0060041,GO:0060147,GO:0060148,GO:0060255,GO:0060303,GO:0060964,GO:0060966,GO:0060968,GO:0061640,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070603,GO:0070646,GO:0070647,GO:0070925,GO:0070983,GO:0071564,GO:0071565,GO:0071704,GO:0071824,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097346,GO:0097458,GO:0097485,GO:0097659,GO:0120036,GO:0120039,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902493,GO:1902494,GO:1902562,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:1904949,GO:1990234,GO:2000112,GO:2000637,GO:2001141
EggNOG free text desc.	cytoskeleton organization
EggNOG OGs	COG5277@1,KOG0679@2759
Ec32 ortholog description	Actin family
Ec32 ortholog	Ec-10_002080.1
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03019,ko03021,ko03029,ko03036,ko04147,ko04812
Exons	3
Model size	258
Cds size	240
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2940.8010.1	prot_H-paniculata_contig2940.8010.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig2940 12466..16605 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929899.8588247-UTR-H-paniculata_contig2940:12448..12465	1622929899.8588247-UTR-H-paniculata_contig2940:12448..12465	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2940 12449..12465 +
1691481061.0681548-UTR-H-paniculata_contig2940:12448..12465	1691481061.0681548-UTR-H-paniculata_contig2940:12448..12465	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2940 12449..12465 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929899.8994327-CDS-H-paniculata_contig2940:12465..12478	1622929899.8994327-CDS-H-paniculata_contig2940:12465..12478	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2940 12466..12478 +
1691481061.080923-CDS-H-paniculata_contig2940:12465..12478	1691481061.080923-CDS-H-paniculata_contig2940:12465..12478	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2940 12466..12478 +
1622929899.9145575-CDS-H-paniculata_contig2940:14995..15129	1622929899.9145575-CDS-H-paniculata_contig2940:14995..15129	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2940 14996..15129 +
1691481061.0899868-CDS-H-paniculata_contig2940:14995..15129	1691481061.0899868-CDS-H-paniculata_contig2940:14995..15129	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2940 14996..15129 +
1622929899.9278736-CDS-H-paniculata_contig2940:16512..16605	1622929899.9278736-CDS-H-paniculata_contig2940:16512..16605	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2940 16513..16605 +
1691481061.0989065-CDS-H-paniculata_contig2940:16512..16605	1691481061.0989065-CDS-H-paniculata_contig2940:16512..16605	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2940 16513..16605 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig2940:12449..16605+
coding sequence from alignment at H-paniculata_contig2940:12449..16605+

protein sequence of mRNA_H-paniculata_contig2940.8010.1

>prot_H-paniculata_contig2940.8010.1 ID=prot_H-paniculata_contig2940.8010.1|Name=mRNA_H-paniculata_contig2940.8010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MYCGDEVAAIVGDIGAETCKFGYGGEESPKHVFSSTAGYLPSESSTSIQS
GGRHVNMEVEGSAPVGSTGVGLGVGGTGNA

mRNA from alignment at H-paniculata_contig2940:12449..16605+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig2940.8010.1 ID=mRNA_H-paniculata_contig2940.8010.1|Name=mRNA_H-paniculata_contig2940.8010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4157bp|location=Sequence derived from alignment at H-paniculata_contig2940:12449..16605+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCTCTACAGGGCAGCCATGTATTGCGGTGGTGAGTGTGGGAACTATTAT
TTTATGGAGATGATTATCAATGCTGCTGCTGCGTTGTGTAGATAGTCTGC
GTCGTGAGAGATAGAAGTTGTGAGATGATGGGTCCAAACAGTACCTGTCT
ACTCTAAATCTCCAATGTCCACTTTTGTGTTTGAAATACACAGTAAAATA
GACAATAGTACAAATAAACAGTACCCGTACCTGCAGTTCTACTGGATTCC
TCTCGTGAATTGTTGAGTGCGGATAGGATACTAAACATCAGATCTCAGAT
GCAATCGATAACGGGGCAAGCAGCAGACAACGAACGGGAGATATTACTAC
GGCCTATGATCGCTTCCTCCACGGTATCGGATGTCGGCATACCACTTTGG
CACAGAGCTGATGGAATTGCAGTCAGTATATCACAGAACCCACACATGTT
CAAAATCAAAACTGCTTTTGTATTGACGAGACCACTAGCGTACATTTGCG
GTAACTGAAAGAATAGTCGAGTGCAGAGCAAGTACAGGTAGCAGCATCAT
TCAAGTGAAGCCAGCAACTCCCGTTTGCCATTAAACAGTAACGGCGCAAA
TAGGTAAGTAGCAGATAGGTCACACCCCAGCATCTGTGGTCGGGTATATA
TACCACAATATATGAAAGCGCGGTGTGGTGAGAAGTCACAAAGGCAAGTG
CGGCTCCCTGTAGGCGATACCAGCAGTACTTGTTACAGGAACCGGTGGGT
TGTTGTCGAGGTGTATTCCGAGCGCCTTTTTATAAGGCTTGGCCTTTGCC
TTCCTTAGGTTACGTATCAACGCGTTCCAAGCTGCAAGGACACTGTATTC
TAGCTAAGGCACACATCAAGGTGTATTCTGCTTGACTGTCACTATCCACA
TTCGTGTATTCAGGTCAACAGTGTGGGGTTTCTCGACCCGCCATTGAGCA
TACCGGCGGTCGTTTAACCACTTTTGTTCGTCGCGGGCCAATCCGTCTAT
CGGAAGCTCCAGTCCGAAGCTGGGAGCGTAATGTCTTGGTTCTTGCCTTG
TATTATCACGCGGTGGGGGCAGCAATCCTGCCCACTCGTCAATGTTGGAG
TTGACCCCGTTGTACTCTCAAGAGTCACTTGTGCGACAGATCGTCTGACC
GCGGGTCTGCGTGATCAGGATAACGTATTGACTAATAACACTACTATATA
TAGGTATATAGGTACAACAACTCAACAACTAATATGTCGTCCGTGAGGAA
CAAATTATAAAAACACAGCGGCGATCACCAAAAGCACAAAAGCACCAATG
ATGCTGCTGTCAATCAAAAGATTTGAGATCTTTTTTTCTTTTTTTTGTTG
GTGCCTGCGTCGCTCGCTTCCTCTTTGGTGTGTGTGTTTGTGTGCTTTTT
CTTTTTTTTTCGGTGCCCCTCGCCCCTCGCCCCCCGCCCCCCGCCCCCCT
CCCCCCTCCCCCCCGCTTCCCTCCGGCCACGATTTGTGTTGCTTTCTCTT
TGTACCTGCGTGCGTGCGTGTCTCGCTCTTCGTGTTGTTTTTTGCAGAGC
CCTCGTCCCCGCCACCGCGCGCGGGCGTCGAATCGAGATCAAATCGAGAG
GTTTTGCCCGCGAGTCGTGCAGCACTGTCTGCTCGTTGTAATGGTTCATG
AGTGAGAGTTGTCGACCTACCACTATACGCCTCCTCCACACACGCACGCT
CCCCCCCCACATATCCACCCCCTCCCTGGCATTTGTTGGTCCCCACCACC
TTTCGTAGGATACGTGGTACGTGGGACGGACGGCGGGGGTGTTGAAACAA
TTTCACGTTTATGGTCGAATTTGGGGTCCTCTTTCGCCTCTCATGTCACA
AATACCTCCCCCCCCCCCCCCATATAGAAATCAATGCCGGCTGGATGTGC
AACGTTTCGTTGTCCGGGATTTGTAGTAAATCCCGAGCAAGCTCAGTGTG
GCATACTAACGCAAGGGTATCCCCATTGTTAAACGCAGATAATGTTGGCG
AAGACGGAATATATCGCACCGTCCCAGCGTTGTTGGTATGGGGTTAGGGT
CAACGGTCTTTTGTTATTTGCGTCCGTTAGCATGCGTACGCTGCCCCTTC
CTCCCCTGGCATATCTGAGAGAAAGCGTATTTGTTCCACCGAGAGAGAGA
GAGAGACGTAGTGTATCATGGAGAGGGGGAAGAATTTATTATTCCATCGT
ACAAGTGAATAAATGAGGGGGCATGGATTCTCTAGTGATTTTAGTCTTTT
TCCAGAGTTGGTTTTCACGTACAGCTTTCCTGGCAAATTGTCCCGCCCTC
TACAACCTCTCTGGTGGTGGTAGTATTTGATTATTCGAACCCTCGATTTG
ATCGAGATGTGTCGATATTTGTAGGCAACTGAGATTTGAGGTTGCCTAGC
ATAACCTCAAAAAGAGTATGATGGAGTCTCCTCTCCCATCCCCGCCGCCG
CCTCCTTCCTTCATTCTCTCGTCCTCTTTCTTCTGAATCTGTATTAATCC
GGTTCCATTCCATTCCATTTTGCCTCTTTTTTTCTTTCGGTCGGCAGACG
AGGTAGCGGCAATCGTGGGCGACATCGGCGCCGAAACGTGCAAGTTCGGA
TACGGCGGCGAGGAATCACCCAAGCATGTCTTCTCGTCGACGGCGGGATA
CCTTCCGTCGGAATCGTCGACTAGCATCCAGGTACAAGACAGCTGCGGCC
GGGTGATGGAGAAAGACTAGTGAAGAAAAACCTGAGGCTTCATTTTTTTT
TTTTTCAAGATCGAAAGGTTTCACCCCCCTGATAAATACGAATACAAGAC
ACGAATAAGAAGAAAAATCTGGAATGAATACTGTATCTGTTTGAGTTGGG
GAATATGTCCAATTGAGGCTAATAATAAGATGCAGTACACTCGACATACC
ATGGAGCATCGAAAATGTCGGGCAGAGAGAGAGTATTCAATCTGTACAGT
ACCATCCGGAAAATAAACAGGACCTGCATATGTGACGATCGGCCGGATAT
ACGACCACCTGGTGACCATCTGTAGAGTGACCTTTCACATACTTGTAATC
GAAAAAAAAAATTATCCCAAGACAAATAATGAGAGTTCGAGACCGTTGCG
AATGCTCCATTCGTATTTGTCCGGAGAGTGACAGGGTTCACCCCCCGGAC
ATATACGAATACTTTGCGTATCGTCATGAAAATTAACAAGTATTCGCCTG
AATTTCAGATCGAGCTCGTGAATTCTATGTGCCCCGGACCATCGACGACT
GCTAATAATACTCGTAAATCGAATGGACAGCGGTGGGTACTTTGTTTTAT
GTGTCTCCTCATTCTGAAACTCGGGCGAATATATATATTTTTTTCGTGTC
GAATACGCCAAGTAGTCGTGTTTGTCCAGGGGGTGAAAGGTTCCCCGTAT
GAGAAAGCTGTGATCAACGGGTGACCCCATATTAATTCATACATGTTAAG
TTCCGAAAACTCATGTTTTAGAGACGCTGTATGATGAGATTTCAGCGTTC
GCTTCAGCGAGAGTTTCTTATTGTTATAGCGGGCCGCACTTGTGTTTCCG
TCTTCTCAGTGCACGAAGCTAACGTACATATGTACCAAGTACAGTATCGA
TGCGCCTCTCGATATCTGATGCCACAGTACAGTACGCTGTTCTAGAGTAC
GTAAAGACCCCGTAACTAGACCATTTTTTATATTTAGGGTTAGAGATTAT
TATTTTTATGTGTACGCACCACGAGTAGTGTGAGATTTTCATCCACACAG
TTTTTGCTGAGATTTTCGTCTCGAGTGGGTGCGATAAGGTTTCGTGTTTG
GTTTTAATCTATGTAAAAATTACTACTACTCGTGGGTGGTCCTATGCCAG
GCGCCTCAGTATATTTGGAGGTTACCAAAAGTATCAAATTGAGCTCGTCC
GTGCGCGTATGTATAGAAGTCTCAACCTCCAAAAGCATACAGGGACAGCG
TCGCCGTCATTGGCATAGCCACTGAATAGTTGTTACCAAAGGGCATTCTA
CATAAAATCCCTCACTGTTCAATTATAATTATTTTTCATGCTATACACTG
TTTTTATACCTCAGAGTGGAGGAAGACACGTAAATATGGAGGTAGAAGGA
TCCGCCCCTGTGGGGAGCACAGGGGTAGGGTTGGGGGTTGGTGGGACCGG
CAACGCA

Coding sequence (CDS) from alignment at H-paniculata_contig2940:12449..16605+

>mRNA_H-paniculata_contig2940.8010.1 ID=mRNA_H-paniculata_contig2940.8010.1|Name=mRNA_H-paniculata_contig2940.8010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at H-paniculata_contig2940:12449..16605+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATTGCGGTGATGTATTGCGGTGACGAGGTAGCGGCAATCGTGGGCG
ACATCGGCGCCGAAACGTGCAAGTTCGGATACGGCGGCGAGGAATCACCC
AAGCATGTCTTCTCGTCGACGGCGGGATACCTTCCGTCGGAATCGTCGAC
TAGCATCCAGACGAGGTAGCGGCAATCGTGGGCGACATCGGCGCCGAAAC
GTGCAAGTTCGGATACGGCGGCGAGGAATCACCCAAGCATGTCTTCTCGT
CGACGGCGGGATACCTTCCGTCGGAATCGTCGACTAGCATCCAGAGTGGA
GGAAGACACGTAAATATGGAGGTAGAAGGATCCGCCCCTGTGGGGAGCAC
AGGGGTAGGGTTGGGGGTTGGTGGGACCGGCAACGCAAGTGGAGGAAGAC
ACGTAAATATGGAGGTAGAAGGATCCGCCCCTGTGGGGAGCACAGGGGTA
GGGTTGGGGGTTGGTGGGACCGGCAACGCA