mRNA_H-paniculata_contig29375.8004.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 221 bits (563), Expect = 5.610e-66 Identity = 113/186 (60.75%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
DYHAAMTD+ FMEWLEHRL+P NA PEF GKKMI+VLDN SYH VEH F+VP+EPGSSFP R GGVSR EVA ATRE+ RL+YPERLEERV TFM++KGW LIWTPPYMPSFQ IELFWQ+GKQYVS NF+LKRKM EV QI
Sbjct: 397 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 582
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 213 bits (542), Expect = 8.620e-66 Identity = 109/184 (59.24%), Postives = 122/184 (66.30%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHRIVE-------------------------------------HRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
DYHAAMTD+ FMEWLEHRL P NA PEF+GK+MI+VLDN SYH + + F+VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KGW LIWTPPYMPSFQ IELFWQ+GKQYVS NF+LKRKM EV QI
Sbjct: 93 DYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 276
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5KUM1_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM1_9PHAE) HSP 1 Score: 212 bits (539), Expect = 9.170e-66 Identity = 109/184 (59.24%), Postives = 125/184 (67.93%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYH-------RIVE------------------------------HRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
DYHAAMTD+ FMEWLEHRL+P NA PEF+G++MI+VLDN SYH ++ E + F+VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KGW LIWTPPYMPSFQ IELFWQ+GKQYVS NF+LKRKM EV QI
Sbjct: 146 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGRQMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 329
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 218 bits (556), Expect = 3.310e-65 Identity = 111/186 (59.68%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
DYHAAMTD+ FMEWLEHRL+P NA PEF+GK+MI+VLDN SYH +VE+ F+VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KGW LIWTPPYMPSFQ IELFWQ+GKQYVS NF+LKRKM EV QI
Sbjct: 363 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 548
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 218 bits (556), Expect = 3.940e-65 Identity = 111/186 (59.68%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
DYHAAMTD+ FMEWLEHRL+P NA PEF+GK+MI+VLDN SYH +VE+ F+VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KGW LIWTPPYMPSFQ IELFWQ+GKQYVS NF+LKRKM EV QI
Sbjct: 373 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 558
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 214 bits (544), Expect = 7.580e-65 Identity = 109/186 (58.60%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
DYHAAMTD+ FMEWLEHRL+P NA PEF+GK+MI+VLDN SYH +VE+ +VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KGW LIWTPPYMPSFQ IELFWQ+GKQYVS F+LKRKM EV QI
Sbjct: 246 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQI 431
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE) HSP 1 Score: 214 bits (545), Expect = 1.950e-64 Identity = 109/186 (58.60%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
D+HAAMTD+ FMEWLEHRL+P NA PEF+GK+MI+VLDN SYH +VE+ +VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KGW LIWTPPYMPSFQ IELFWQ+GKQYVS NF+LKRKM EV QI
Sbjct: 262 DHHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 447
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 211 bits (536), Expect = 8.730e-64 Identity = 109/186 (58.60%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVSFNFQLKRKMHEVREQI 441
DYHAAMTD+ FMEWLEHRL+P NA PEF+GK+MI+VLDN SYH +VE F+VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KG LIWTPPYMPSFQ IELFWQ+GKQYVS NF+LKRK+ EV QI
Sbjct: 258 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQI 443
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5KEG4_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG4_9PHAE) HSP 1 Score: 191 bits (485), Expect = 1.560e-59 Identity = 96/167 (57.49%), Postives = 109/167 (65.27%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQ 384
DYHAAMTD+ FMEWLEHRL+P NA PEF+GK+MI+VLDN SYH +VE+ F+VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV T MR+KGW LIWTPPYMPSFQ IELFWQ+GKQ
Sbjct: 19 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTLMRKKGWALIWTPPYMPSFQPIELFWQHGKQ 185
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Match: A0A6H5KRM6_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM6_9PHAE) HSP 1 Score: 192 bits (487), Expect = 2.970e-56 Identity = 98/170 (57.65%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 1 DYHAAMTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHR---------------------------------------IVEHRFDVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPERLEERVQTFMRQKGWELIWTPPYMPSFQSIELFWQNGKQYVS 393
DYHAAMTD+ FMEWLEHRL+P NA EF+G +MI+VLDN SYH VE+ F+VPTEPGSSFP R GGVSR EVA ATRE+ L++PERLEERV TFMR+KGW LIWTPPYMPSFQ IELFWQ+GKQYVS
Sbjct: 305 DYHAAMTDSMFMEWLEHRLSPAYNAILEFKGNRMILVLDNASYHHGFDAEVKVPETNTKKQNVDLLRMFGAKPIRVRRKEGEQGSVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVS 474 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29375.8004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29375.8004.1 >prot_H-paniculata_contig29375.8004.1 ID=prot_H-paniculata_contig29375.8004.1|Name=mRNA_H-paniculata_contig29375.8004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp MTDTTFMEWLEHRLTPVCNANPEFRGKKMIIVLDNTSYHRIVEHRFDVPTback to top mRNA from alignment at H-paniculata_contig29375:735..1292- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig29375.8004.1 ID=mRNA_H-paniculata_contig29375.8004.1|Name=mRNA_H-paniculata_contig29375.8004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=558bp|location=Sequence derived from alignment at H-paniculata_contig29375:735..1292- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig29375:735..1292- >mRNA_H-paniculata_contig29375.8004.1 ID=mRNA_H-paniculata_contig29375.8004.1|Name=mRNA_H-paniculata_contig29375.8004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig29375:735..1292- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |