mRNA_H-paniculata_contig2935.8000.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A0V0VEL0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0VEL0_9BILA) HSP 1 Score: 214 bits (545), Expect = 4.080e-59 Identity = 142/449 (31.63%), Postives = 229/449 (51.00%), Query Frame = 3
Query: 69 TQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDE---KNFVTA-ASVNPFSALSDADDDESNGDSKMKD-TEPAVEDAPSAGKSATASWGNTTKQSGTEAQRSRDRTVSMGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDD-LVIAGGREKVDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVEGKVKI---LAPGSADK 1388
T Y+ W G P ++HLR+FG AYV Q RRK + K +F+ Y + +R+++ V+ ++V+ +E K V + + +D D+D+ D D TE P K+ N K R ++ +P + EAL+G KW+ AM EE AL TW D LPA RK I+ KW+FK K+ +G VS+YK RLV +G+S+ D+ ET A V ++ T++++ A D +++ ++ A+ + +++ +F + PP F+ V +L+++LYGLKQ+ W + DFL+ + LQR+ D C+Y S G E +++G+YVDD L + E N+ F I + S +G+E+ DR TI I Q +YIR VL ++ + C+ V TP + +K+ +AP S D+
Sbjct: 115 TPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDEVTDVQFNESLQKRLVLIDGEEDSWMQTADKDEDDFLEDDTTDDKTEKRGPGRPPGSKNKIKVISNPLKMELRSKSTERTAMLAAADPLTEEEALEGANAEKWKEAMLEEISALHMNDTWILTD---LPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEIQQFDVKTAFLHGKIDELIFMEQPPCFNDG---SGRVCKLQRALYGLKQAPRAWIKRMNDFLLTLNLQRAEADPCIYVSAP-GAECRIILGLYVDDGLFCCSNLTVLKELVKNLDAEFEIT-VRDPSNFVGLEIYRDRSKRTIAIRQKNYIRRVLLKFNMESCKSVATPGDPSIKLSKDMAPSSDDE 555
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A5S6QBM2_TRIMR (Integrase catalytic domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QBM2_TRIMR) HSP 1 Score: 215 bits (548), Expect = 2.570e-58 Identity = 150/470 (31.91%), Postives = 237/470 (50.43%), Query Frame = 3
Query: 27 SILPKSRPNAAAQGTQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEKN-----FVTAASVNPFSA--------LSDADDDESNGDSKMKDT--EPAVEDAPSAGKSATASWGNTTKQSGTEAQRSRD-----------RTVSMGEPKSAAEALKGP--EVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDDLVIAGGREKVDE-FKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVE 1349
+ L PN +A+ T ++ W G+ P L H+R+FGS AY QKRRK +D+ G+ + YD+ + YR+ +P T + +S +VR EK+ F + P A + + + S G + E ++ PS + +S + + +QR TV EP S E P E KW AA +EE +L WE +LPAGRK I +KW+FK K K +G++ YK RLV +GFS+ GED+ ET A V T+ ++S+ A + ++ AY N + +EL+ + PP F S + + V RL++S+YGLKQS WN + L +G R+ D CLY R+ T ++ +YVDDL++AG E++ +++ F KDL +S LG++++ +G ++ Q S I ++LK+ G E + + TP+E
Sbjct: 154 AYLQNRLPNRSAEKTPFELWTGKRPNLSHIRIFGSKAYSFVPQQKRRKWDDRAMQGILVGYDNATKGYRLLDPVTNRIWISRSVRIIEKDEQYVDFAVQETYMPEGAKELELKKQIDKSIEPSSRGAEVNVENIFESPKQELPSQEEVEVSSNESLLSPAPRRSQRINKGMPPQKLSYKVHTVEACEPSSWEEVTSLPPCERDKWIAAAKEEMASLKNRDVWELV---KLPAGRKVISSKWVFKIKRKADGAIDTYKARLVARGFSQRYGEDYDETFAPVVKHETIRMLLSIAAMRSLHVRHFDVKCAYLNGEIHEELYMEQPPGFVQSGNE-NLVLRLKRSIYGLKQSARAWNKKATEVLTSLGFDRANADLCLYTRRESTGGTTYVL-LYVDDLLVAGETEEITRNIGAKLNKHFVTKDLGKVSSYLGMQIERQE-DGAFLLHQHSKIEQLLKKVGMSEAKPMGTPIE 617
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 213 bits (541), Expect = 8.560e-58 Identity = 140/456 (30.70%), Postives = 233/456 (51.10%), Query Frame = 3
Query: 33 LPKSRPNAAAQG-TQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEKN--FVTAASVNPFSALS-------DADDDESNGDSKMKDTEPAVEDAPSAGKSATASWGNTTKQSGTEAQRSRDRTVSMGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDDLVIAGGREK-VDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVEGKVKIL 1367
L P + +G T ++ W GE PK+DHLR+FG T Y +R+KL+ K + L Y ++ YR+Y+ + V S +V +E N F N A++ D+E + + K++ +E + G+ T + TT EPK+ + L P+ KW+ AME+E +L W + LP GRKA+ +KW+FK K+ +G+ R+K RLV QGFS+ G D+ ET + V ++ TII+ + L M++ A+ N +++E++ + P F ++ V +L +S+YGLKQS WN L + L MG ++T D C+Y + ++ VYVDD+++AG +K + E K +++ F IKD+ L+ LG+++ G I + Q +Y VLK++G + + V+TPV+ K++
Sbjct: 86 LRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNHAFEKEPVANEDGAVNRYVEFDCQEPDNEESPEQKVQRSERLRKPPDYYGEWVTVASNPTT------------------EPKTVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVE---LPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKE-HLVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAATGEM---FIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKLV 516
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 212 bits (540), Expect = 1.930e-56 Identity = 142/457 (31.07%), Postives = 230/457 (50.33%), Query Frame = 3
Query: 69 TQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEKNFVTAASVN---------PFSALS-DADDDESNGDSKMKDTEPAVEDA---PSAGKSATASWGNTTKQSGTEAQRSRDR-------------TVSMGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLY---FSRDDGRETDLLVGVYVDDLV-IAGGREKVDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVE 1349
T Y+ W + P + +L+VFGS ++ S RRKL+ + VF+ Y D+ Y++Y+ +K+ S +V E F V P LS D + D T P +ED P+ G+S S+ + T+ QR + T EP+S +EAL G KW+ A++EE+ +L+ TWE P P G I +KW+ K K +G+V R+K RLV QG+S+ G D+ E + VA ++ T+++L H+ ++ M++ A+ N +E +++ P F +V +L+KSLYGLKQS WN TL FL G ++S D+C+Y D+G + +++ VYVDD++ I+ ++ K + + F + D + +LG+ +K DR T+ ISQ Y+ VL R+G C+ ++TP+E
Sbjct: 586 TPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQ-EHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLE 1038
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A0A1WXQ3_ZEUCU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WXQ3_ZEUCU) HSP 1 Score: 212 bits (539), Expect = 2.620e-56 Identity = 145/442 (32.81%), Postives = 229/442 (51.81%), Query Frame = 3
Query: 84 WHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEKNFVTAASVNPFSALSDADDDESNG--------DSKMKDTEPAVEDAPSAGKSATASWGN-TTKQSGTEAQRSRDRTV-SM----GEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDD-LVIAGGREKVDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVEGKVKI 1364
W G P L HLR+FG TA V QKR KL+ K VF+ Y S +YR+Y +S +V+ E ++ + P + ++ ESN +S++ D + ++ ++A ++S A +S+ + SM +P S AL PE G W+ AM+EE + TW +LP G++AI +KW+FK K EG+ RYK RLV +G S+ +G D+ ET + V +L + ++ A HD + ++ A+ N +++E+F K P + + V RL KSLYGLKQ+ WN+ L + L+ +GL RS D C+Y+ + + + V +YVDD LV + +E K+ +S +F +KD+ S+S VLG+ V+ D I + Q YI VLKR+G ++C V TP++ K+
Sbjct: 615 WSGVRPNLKHLRIFGCTAMVYIPKQKRLKLDAKSDECVFVGYCVASKAYRLYRKSDNKFIVSRDVKFLEDSYNKSKRAEPNLIVDIINEKESNDINNSGEVIESELSDVSNSSDNEYDENEAADQHNNKCVVRRSERIANKSKGSLLLSMMSDGDDPVSLEAALNSPEAGDWKRAMKEEIDSHKSNKTWVLT---KLPKGKRAINSKWVFKTKRNAEGAFVRYKARLVVKGCSQKQGIDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYDDN---SGRVCRLLKSLYGLKQASKVWNDKLNEALISLGLNRSEVDQCIYYCVS--KHSMVYVAIYVDDVLVFSNDKEATQRIKNVLSSKFKMKDMGSVSSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMNDCNAVATPLDLSQKL 1048
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A8J5Z630_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z630_9ROSI) HSP 1 Score: 207 bits (528), Expect = 4.740e-56 Identity = 132/450 (29.33%), Postives = 244/450 (54.22%), Query Frame = 3
Query: 51 NAAAQGTQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEKNFVTAASVNPFSALSDADDDESNGDSKMKDTEPA---VEDAPSAGKSATASWGNTTKQSGTEAQRSRDRTVSMGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDDLVIAGGREKV-DEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVEGKVKILAPGSADK 1388
+A T ++ WHG P + HL++FG YV +++R KL + +F+ Y D YR+Y+P T+++ +S ++R DE+ N ++D + G+ ++ ++EP+ V+D P G + A QR V++ EP + EA K W+ AME E + + TW D + P +K I +W+F+ K +GS++++K RLV +G+S+ G DF ET A VA + T+ ++SL A + + +++ A+ N +++E++ + P F + V RL+K++YGLKQ+ W + + +L +G ++S ++ L+ + ET L+V +YVDDL++ G ++ + DEFK + + F + DL +++ +LG+EV ++ + I ISQ ++ ++L ++G C+ V+TP+ K+ + G +K
Sbjct: 7 HAVKDKTPFEAWHGLKPTVSHLKIFGCVCYVFVPAERRTKLEKRSVPCIFVGYSSDKKGYRVYDPSTRNILVSRDIRFDEERTWNWDGSNACQL----EEDSAEGNLELAESEPSSGNVDDLPVRGTRSIADV----------YQRC---NVAIVEPSNYKEAAKDM---YWKRAMEAELDMIQKNQTW---DLVKRPEKKKVIGVRWVFRAKFNADGSLNKHKARLVVKGYSQQYGIDFEETFAPVARLDTIKLLLSLAAQKQWRIHHLDVKSAFLNGYLKEEIYVEQPDGFQIQGHEDK-VYRLKKAMYGLKQAPRAWYDRIDTYLSRLGFEKSLSEPTLFVKKSK-EETLLIVSIYVDDLLVTGSKDVIIDEFKAQMQEAFDMTDLGTMTYLLGMEV--NQSDRGIFISQQAFALKILDKFGMQNCKPVSTPMAQSEKLSSIGDYEK 429
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 207 bits (526), Expect = 1.050e-55 Identity = 140/445 (31.46%), Postives = 222/445 (49.89%), Query Frame = 3
Query: 84 WHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEKNFVTAASVNP---FSALSDADDDESNGDSKMKDTEPAVEDAPSAGKSATASWGNTTKQSGTEAQRSRDRTVS--------------MGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDD-LVIAGGREKVDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVEGKVKI 1364
W G P L LR+FG TA V QKR KL+ K +F+ Y +S ++R+Y +S +V+ E T P +++ + ++ N ++ ++E S + T Q G + R ++ + +P + EAL PE W+ AM+EE + TW +LP G++AI TKW+FK K EG++ RYK RLV +G S+ +G D+ ET + V +L + ++ A HD + ++ A+ N +++E+F K P +S + V RL KSLYGLKQ+ WN+ L + L+ +GL RS D C+YF + + + V +YVDD LV + ++ K+ +S + +KD+ S S VLG+ V+ D I + Q YI VLKR+G D+C V TP++ K+
Sbjct: 74 WSGVKPNLKQLRIFGCTAMVHIPKQKRLKLDAKSEECIFVGYCIESKAFRLYRKSDYKFIVSRDVKFLENTSNTFKRAEPNLIVDIINENEANDINNSGELNESELWDVGISSESEYDTPDDSEVADQCGEKYSVRRSERIANKAKRKLLLSVVSDVNDPVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDN---SGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKL 510
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT) HSP 1 Score: 208 bits (529), Expect = 1.590e-55 Identity = 140/457 (30.63%), Postives = 231/457 (50.55%), Query Frame = 3
Query: 69 TQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEKNFVTAASVN---------PFSALS-DADDDESNGDSKMKDTEPAVEDA---PSAGKSATASWGNTTKQSGTEAQRSRDR-------------TVSMGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLY---FSRDDGRETDLLVGVYVDDLV-IAGGREKVDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVE 1349
T Y+ W + P + +L+VFGS ++ S RRKL+ + VF+ Y ++ Y++Y+ +K+ S +V E F V P LS D + D T P +ED P+ G+S S+ + T+ QR + T EP+S +EAL G KW+ A++EE+ +L+ TWE P P G I +KW+ K K +G+V R+K RLV QG+S+ G ++ E + VA ++ T+++L H+ ++ M++ A+ N +E +++ P F +V +L+KSLYGLKQS WN TL FL G ++S D+C+Y + D+G + +++ VYVDD++ I+ ++ K + + F + D + +LG+ +K DR T+ ISQ Y+ VL R+G C+ ++TP+E
Sbjct: 189 TPYEVWFSKKPDVSNLKVFGSVCFIHTPSNLRRKLDPRSRKAVFIGYPLNTKGYKLYDIESKNFVRSKDVGFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQ-EHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSITNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLE 641
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A0V1KQY5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1KQY5_9BILA) HSP 1 Score: 208 bits (529), Expect = 3.360e-55 Identity = 146/450 (32.44%), Postives = 227/450 (50.44%), Query Frame = 3
Query: 69 TQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDE--KNFVTAASVNPFSALSDADDDESNG---DSKMKDTEPAVEDAPSAGKSATASWGNTTKQSGTEAQRSRDRTVSMGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISF-VRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDD-LVIAGGREKVDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPVEGKVKI---LAPGSADK 1388
T Y+ W G P ++HLR+FG AYV Q RRK + K +F+ Y + +R+++ V+ ++V+ +E + + S + AD DE + D TE P K+ N K R ++ +P + EAL+G KW+ +M EE AL TW D LPA RK I+ KW+FK K+ +G VS+YK RLV +G+S+ D+ ET A V ++ T++++ A D ++ ++ A+ + ++ EL FK P P F D S V +L+++LYGLKQ+ WN L DFL+ + LQR+ D C+Y S G E ++ G+YVDD L+ + E + F I + S +G+E+ DR TI I Q +YIR VL ++ + C+ V TP + +K+ +AP S D+
Sbjct: 434 TPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDKVTDVQFNESLQKRLVLIDGEEDSWMQTADKDEDDFLEYDITDDKTEKRGPGRPPGSKNKIKVISNPLKMELRSKSTERTAMLAAADPLTEEEALEGANAEKWKESMLEEISALHMNDTWILTD---LPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFLHGKID-ELIFKEQP---PCFNDRSGRVCKLQRALYGLKQAPRAWNKRLNDFLLTLNLQRAEADPCIYVSAP-GAECRIIFGLYVDDGLLCCSNLTVLKELVKKLDDEFEII-VGDPSTFVGLEIYLDRSKRTIAIGQKNYIRRVLLKFNMESCKSVATPGDPSIKLSKDMAPSSDDE 874
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 208 bits (530), Expect = 3.990e-55 Identity = 139/439 (31.66%), Postives = 230/439 (52.39%), Query Frame = 3
Query: 48 PNAAAQG-TQYKRWHGETPKLDHLRVFGSTAYVIFQSQKRRKLNDKGWAGVFLEYDDDSHSYRIYEPRTKSVEMSSNVRSDEK---NFVTAASVNPFSALSDADD-DESNGDSKMKDTEPAVEDAPSAGKSATASWGNTTKQSGTEAQRSRDRTVSMGEPKSAAEALKGPEVGKWRAAMEEEWGALVEYGTWESEDPGRLPAGRKAIRTKWIFKRKLKEEGSVSRYKDRLVDQGFSRVEGEDFLETSASVACMPTLYTIISLPAAHDFDLEGMNIDVAYSNVPVEQELFFKLPPQFSPSFRDISFVRRLRKSLYGLKQSDGNWNNTLGDFLVGMGLQRSTTDSCLYFSRDDGRETDLLVGVYVDDLVIAGGR-EKVDEFKHNISQRFWIKDLSSLSRVLGIEVKHDRPNGTIIISQGSYIREVLKRYGFDECRGVTTPV 1346
P A +G T ++ WHG TP ++HL+VFG Y + KR KL+ K G+FL Y S YRIY P TK + +S NV+ DE N+ + + + D+ E N +S+ ++ + +D P G A V+ EPK AEA E+ WR AM+EE + + TW+ D P +K I KW+++ KL +GSV++ K RLV +G+ + G DFL+T A VA T+ +++L A + + ++ A+ N +E++++ P F + V +L K+LYGLKQ+ W + ++L+ G +RS ++ LY R E L++ +YVDD+++ G + + +FKH++ F + DL ++ LG+E+ + + I ISQ Y+ E+LK++ ++C+ V TP+
Sbjct: 599 PTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVDNLQEQNSESEEQNLDD--DDFPVRGTRDLAEIYERC-------------NVAALEPKEYAEAA---ELEGWRVAMQEEMNMIEKNNTWQLVD---RPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENK-VYKLHKALYGLKQAPRAWYTRIDNYLLQKGFERSENEATLYVKRSQN-EVKLIISLYVDDMLVIGSDFDSLRQFKHDMENEFEMSDLGQMNYFLGMEIY--QCDAGIFISQRKYVLEILKKFHMEKCKPVDTPL 1012 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2935.8000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2935.8000.1 >prot_H-paniculata_contig2935.8000.1 ID=prot_H-paniculata_contig2935.8000.1|Name=mRNA_H-paniculata_contig2935.8000.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=462bp MGGSGALDSILPKSRPNAAAQGTQYKRWHGETPKLDHLRVFGSTAYVIFQback to top mRNA from alignment at H-paniculata_contig2935:14747..16416- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2935.8000.1 ID=mRNA_H-paniculata_contig2935.8000.1|Name=mRNA_H-paniculata_contig2935.8000.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1670bp|location=Sequence derived from alignment at H-paniculata_contig2935:14747..16416- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2935:14747..16416- >mRNA_H-paniculata_contig2935.8000.1 ID=mRNA_H-paniculata_contig2935.8000.1|Name=mRNA_H-paniculata_contig2935.8000.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2772bp|location=Sequence derived from alignment at H-paniculata_contig2935:14747..16416- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |