mRNA_H-paniculata_contig2931.7996.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5KJF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF8_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.480e-39 Identity = 79/155 (50.97%), Postives = 97/155 (62.58%), Query Frame = 2
Query: 521 VDDEQTMSFGPNDPPPFYACDAPKEDEMGVKARDNCKRERSQEAAGGESAAGEEMGVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
V QT +F PPPF+ DAP++D+ K G V+E Y GK KG RQ LW+RG ++DGMS V+DDMH++KVL ALPDF NE+ A+QH +ESRGHILL S K HPEV VGIEYSWG SKQKFRR++N+
Sbjct: 197 VGQTQTSTFAVGAPPPFFEWDAPRKDKKNAK------------------------GKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKIND 327
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5JCU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU7_9PHAE) HSP 1 Score: 146 bits (368), Expect = 5.720e-39 Identity = 76/151 (50.33%), Postives = 94/151 (62.25%), Query Frame = 2
Query: 533 QTMSFGPNDPPPFYACDAPKEDEMGVKARDNCKRERSQEAAGGESAAGEEMGVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
QT +F PPPF+ DAP++D+ K G V+E Y GK KG RQ LW+RG ++DGMS V DDMH++KVL ALPDF NE+ A+QH +ESRGHILL S K HPEV VGIEYSWG SK KFRR++++
Sbjct: 5 QTSTFAVGAPPPFFEWDAPRKDKKNAK------------------------GKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVRDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKPKFRRKIDD 131
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 147 bits (372), Expect = 9.690e-38 Identity = 78/155 (50.32%), Postives = 96/155 (61.94%), Query Frame = 2
Query: 521 VDDEQTMSFGPNDPPPFYACDAPKEDEMGVKARDNCKRERSQEAAGGESAAGEEMGVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
V QT +F PPPF+ AP++D+ K G V+E Y GK KG RQ LW+RG ++DGMS V+DDMH++KVL ALPDF NE+ A+QH +ESRGHILL S K HPEV VGIEYSWG SKQKFRR++N+
Sbjct: 171 VGQTQTSTFAVCAPPPFFEWHAPRKDKKNAK------------------------GKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKIND 301
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 151 bits (382), Expect = 3.930e-37 Identity = 79/155 (50.97%), Postives = 97/155 (62.58%), Query Frame = 2
Query: 521 VDDEQTMSFGPNDPPPFYACDAPKEDEMGVKARDNCKRERSQEAAGGESAAGEEMGVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
V QT +F PPPF+ DAP++D+ K G V+E Y GK KG RQ LW+RG ++DGMS V+DDMH++KVL ALPDF NE+ A+QH +ESRGHILL S K HPEV VGIEYSWG SKQKFRR++N+
Sbjct: 780 VGQTQTSTFAVGAPPPFFEWDAPRKDKKNAK------------------------GKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKIND 910
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5K769_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K769_9PHAE) HSP 1 Score: 141 bits (355), Expect = 3.040e-35 Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 2
Query: 455 RWRVEHAVHRRGYDEDGGLEAQVDDEQTMSFGPNDPPPFYACDAPKED-EMGVKARDNCKRERSQEA--AGGESAAGEEMGVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
+W E YD ++ +V D QT +F PPPFY DAP++D ++ KA+ + A + ++E Y GK KG +Q LW+RG +++GM+ S +AD+ +++KVL AL DF +E+ A+Q+ +ESRGHILLLS K HPEV VGIEYSWG SKQ+FRR+ N+
Sbjct: 130 KWSTEFTEGAEVYD----MKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKXXXXXXXXXXXXDVAADGAGTKPRDKIKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYND 305
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 141 bits (355), Expect = 4.380e-34 Identity = 86/191 (45.03%), Postives = 107/191 (56.02%), Query Frame = 2
Query: 521 VDDEQTMSFGPNDPPPFYACDAPKEDEMGVKAR------DNCKR------ERSQEAAGGESAAG--EEM----------------------GVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
V QT +F PPPF+ DAP++D+ K + K ER G + AG ++M G V+E Y GK KG RQ LW+RG ++DGMS V+DDMH++KVL ALPDF NE+ A+QH +ESRGHILL S K HPEV VGIEYSWG SKQKFRR +N+
Sbjct: 306 VGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVNPFFEWDTPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRRIND 496
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5KLA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA1_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.620e-32 Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 2
Query: 686 GVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
G V++ Y GK KG RQ LW+RG ++DGMS V+DDMH+DKVL ALPDF E+ A+QH +ESRGHILL S K HPEV VGIEYSWG SKQKFR++ N+
Sbjct: 193 GKVKKGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVDKVLQALPDFKTERKALQHLVESRGHILLSSPKSHPEVAGVGIEYSWGFSKQKFRQKNND 292
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 125 bits (315), Expect = 2.820e-28 Identity = 75/184 (40.76%), Postives = 105/184 (57.07%), Query Frame = 2
Query: 455 RWRVEHAVHRRGYDEDGGLEAQVDDEQTMSFGPNDPPPFYACDAPKEDEMGVKARDNCKRERSQ-------EAAGGESAAGEEMGVVREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
+W E YD + +V D QT +F PPP + DAP++D VK KR + + A + ++E + GK KG +Q LW+RG + +GM+ S +AD+ +I+KVL AL +F +E+ +Q +ESRGHILLLS K HPEV VGIEYSWG SKQ+FRR+ N+
Sbjct: 781 KWSTEFTEGAEVYD----TKLKVGDTQTSTFAAGSPPPLW--DAPRKD---VKVARKAKRXXXXXXXXXXXDEGAADGAGTKPRDKIKEGHEGKAKGSKQYLWERGWWIEGMNASVGIADEKNIEKVLQALTNFESERTELQCLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYND 955
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 122 bits (306), Expect = 4.220e-27 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 2
Query: 692 VREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
++E Y GK KG +Q LW+RG +++GM+ S +AD+ +++KVL AL DF +E+ A+Q+ +ESRGHILLLS K HPEV VGIEYSWG SKQ+FRR+ N+
Sbjct: 804 IKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYND 901
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.090e-26 Identity = 55/98 (56.12%), Postives = 77/98 (78.57%), Query Frame = 2
Query: 692 VREEYVGKPKGKRQVLWKRGLFEDGMSISKSVADDMHIDKVLSALPDFTNEKPAVQHFLESRGHILLLSLKFHPEVVRVGIEYSWGMSKQKFRRELNN 985
++E Y GK K +Q LW+RGL+++GM+ S ++D+ +++KVL AL DF +E+ A+Q+ +ESRGHILLLS K HPEV VGIEYSWG SKQ+FRR+ N+
Sbjct: 521 IKEGYEGKAKDSKQYLWERGLWKEGMNASVGISDEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYND 618 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2931.7996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2931.7996.1 >prot_H-paniculata_contig2931.7996.1 ID=prot_H-paniculata_contig2931.7996.1|Name=mRNA_H-paniculata_contig2931.7996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp MEFLPHVARRRTEKESADQIRGQAEGSADYRHDGGVLGLGGGEDVPQRWRback to top mRNA from alignment at H-paniculata_contig2931:15356..16621+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2931.7996.1 ID=mRNA_H-paniculata_contig2931.7996.1|Name=mRNA_H-paniculata_contig2931.7996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig2931:15356..16621+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2931:15356..16621+ >mRNA_H-paniculata_contig2931.7996.1 ID=mRNA_H-paniculata_contig2931.7996.1|Name=mRNA_H-paniculata_contig2931.7996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig2931:15356..16621+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |