mRNA_H-paniculata_contig293.7991.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig293.7991.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI) HSP 1 Score: 1736 bits (4496), Expect = 0.000e+0 Identity = 1146/2009 (57.04%), Postives = 1284/2009 (63.91%), Query Frame = 1
Query: 106 QVLFFGEFTHYDQAPTDGGEVDEVKFREAVVVRMLQVVPHGEVPSGLSLPPTFRSVTQSEPFFLEVFCKDLNNPSNTYFEKLVPKTQVAGGAFFTLPQEVLTNHLILRGSFQAMSVVISGTVIPRPNLSPAALQALMSAGKPSAGAPSASALVPXXXXXXXRGPMSTVNPGMTDAVXXXXXXXXXQNRGPACAAGQPGVPAVGPSANAEGNAPGRPGAGK------------------------TSSPSPPLPTATAPKESLLPKSWEPLVLPPVSSVVKPVESTTVVSSGLGATSAGKTGGGGIAPGDLAPYGEAGLSVALSAPPERLRRRVAEANPFDERLLVPAEAARKLREAVTQLSSLANEVGPAGREAECKGLESTAESVEACFRHAAARGASVKTPANGGE-GEARGG--------------NETEGKATPIPSGEVFDEDVSWRLATAVIRSLRGFRFAGAGTEAAAVPGELG--------HTPEVRICPDGSVSVDDGPRRVALAGLRLAGAAATAPGPARALLESGVFHVLWRLPSDPAATPAGIALALGALCQGVRHAEILQVFSTKME---------IKQEGSSVHLGGYEACAAVLSGQVAHPAALARVRSIMQYVALVECLKLVRNLAAKVGAA-SMGMTQSVVSKSGAGKRPAT---------APGSVKGMEELAHALGALEALLSEGAGGTSASGMQPGIGKGDRKRRLQGFEVLLAKLDGEKDASNAASRNEGDDAGXXXXXXXXXXXXXXXGEAANNPGVAAAISAHRGREAARDKRPRGGLAPSLMSLLWEHQLPAALAAGVTAAARASEEAAEAATMGRRGEESTETGAGAGEGPTSAAA--------ALVFAAVRQVILRLLRGAGDPVSGALVFAGQPRSTAALAFALDPSSLATPVRPEGGPSMEILADGLDETLVSPGGLARLLIRSCQALSAADLALSLDDETAESGGGG------------NRXXXXXXXXXXXXLASSGAVSFLSGGAEGDMTAAIRMLHELGPSAAGRSAACEVICRHALPAVLSPPSGGXXXXATVTSSLLLWILEADQETCSEVLAERWKALMSRVATLAGEVGWADSLSHRLYLFHKAMDMVAADARSE------DIDSSDSGNGDLPRAGELMAGLKRQSQTLAVYLGLEDAPDL-----------------------PPDTSELSDTDLMGSGKASARLLPRTEEERRRAAAPV---------------------------------------IVALTLRLKMLALAAARGLGASYSAFAGGAAVPALAGVVEILAFGLAKAGANRALAHRVRLGRAGRAAVAARAEMTVTAARTRSSAPPRLKDPSKEPLLLVGDLFTAPGPGEAEEAELRWEQEPGALASEQRGLEAAEHEARLLACAVPALRLLRHCLGRLADAGAQPPVGPLDAVTALLDLEAALAMLPLDTS-SSTPPGAN---TASEAAAWDSEATPLVGLALRAEALVLSSCRLWCPPRRWSTLRGSGKGSSAADTEARGSGGSFLHRVSAHALACPANHASGVRLLTALLPPETPTPLHRLNPPEAMAAAAAAGVAATAVADAGGGEQVGVNGAPGSSWGGSSSLSGVGRLVGRVHTAAALERSEGLRRQAVAALERRVGEVRDRWDLCIAGDLFP--RAAGTHEEGDEDGEDNDPRATGKXXXXXXXX-----EEGWRPTLAANPILAVTAPGLVNVPAVVVSLCHSTSPVLQARVLELARNRAVDVGPMTTQALGAALVRTLISSIERYIGQSQPLGGRSEKDGDRSWQPVARVLGVILAVADTSRSAAGRVGLLLGGAVEALMPCLGLPKPEVIRSALEVLCSFVEGPRLSEVRRYSEPPCSFATLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSCAADALQALRPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYRHRLTLLKGGKSQEQKGLDLDRRVLRLLRAASWAIQV 5637
QVLFFGEF P + GE+DEVKFREAVV R++ VVP GE P+ ++LPPTFR +TQ EPF LEVFCK+LNN + YF++L+P V GGA +T+PQ+++TNHL++RGSFQAMSVVI GTV+PR LSP A+QAL + KP G PS XXXXXXX XXXXXXXXX +SPS P P+ + S LPK+W PL LP ++ T + G G T+ G G++P DLAPYGEA LS AL+ PPERL+R AEANPFD+R LVPA+AAR ++EAV +L SLA+E GPAGR EC+ L++ A+ VEACFR +TPA GE G +GG T AT +PS E F++DVS LATAVIRSLR FR A AGTEA ++P G HTP V + DGSV+VDDG RRVALAGLRLAGA ATAP PA ALL +G FHVLWRLP DPAATP G+ALALGALCQG+RHA++L+VF T+ E + EG S LGGYEACA+VLS QVAHPAAL+R RSIMQYVALVECL+LVR LA K G + K G P +VKGME+LAHALGALEAL+SEGAG TSASG+QPGI KGDRKRRLQGFEVLLAK AARDKRPRGGLAPSL++LLWEHQLPAALAAGV ALVFA VRQV LRLLRGAGDP+SGALVFAGQPRSTAALA+ LDPS+LATPV PE P++E LADGLD+TLV+PGGLARLL+RSCQALSAADLALS D++ ++G GG X XXXXXXXX + LSGGAE DMTAA+R LHELGPS AGRS+ CEV CR ALPAVL+PP GG TVT+SLLLW+LE DQE+CS+VLAERW +L SRV LA EVGW+DSLSHRLYLFH AM MVA DA+ S G+GDLPRAGE+MAGL RQS TLAVYLGLED PD P + S T G G L IVALTLRLK+LALAA+RGLGASY AFAGGAAVPALAG+VEILAFGLAKAGANRALAHR + ++ PPRLKDPSKEPLLLVGDLFTAPGPGEAEE ELRWEQEPG + SEQRGLEAAEHEARLL CA+PALRLLRHCLGRL+DAGA+PPVGPLDAV ALLD EAALAMLPLD SS PPG++ + S +WD ATP V LALRAEALVLSSCRLWCPPR WS LR +G SFLHRVSAHALACPANH SG RLLTALLPPE+P LHRL P A A S GGS VGRLVGRVHTAAALE+SEG RRQAVAALERRV E+ RWD+C+AGDLFP AA D DG TG WRP+L NP+LAVTAPG+VNVPAVV+SLCHS SPVL RVLELAR RAV +GPMT +AL A+LVR+LI IERY+GQSQPL GRS+KD + SW+ V RVL VILAV+D S AGRVGLLLGG +EALMPCLGLPKPEVIRSALEVLCSFVEG R+SEVRRYSEP CSF TLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPS AADALQAL+PRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRY+HRL+LLKGG+ EQKGLDLDRRVLRL+RAA WAIQV
Sbjct: 7 QVLFFGEFR-----PKETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSKYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQALTVSDKPPLGGPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASPSGPGPSKDS---SSLPKAWAPLALPAAAA--------TAAAVGQGGTT-----GDGVSPADLAPYGEAELSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLADESGPAGRNLECEALDAAADCVEACFRR--------QTPAKKGEEGGQQGGLVPSPVAVEQGSTVATTGTTATVVPSSEAFNDDVSGPLATAVIRSLRFFRAAAAGTEAGSIPAGEGEEERGGGRHTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPAGALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEGVDDGAGGAEAEGLS-RLGGYEACASVLSRQVAHPAALSRGRSIMQYVALVECLQLVRKLATKAGTTVAAAKAAEATGKDGXXXXXXXXXXXXXXXXGPAAVKGMEDLAHALGALEALMSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAK-------------------------------------------------------AARDKRPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGAGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPESSPTIEALADGLDQTLVTPGGLARLLVRSCQALSAADLALSTADKSPQAGRGGMVIDGXXXXXXXXXXKTGXXXXXXXXXXAGATTGILSGGAEADMTAALRKLHELGPSLAGRSSVCEVACRFALPAVLNPPPGGGRASVTVTTSLLLWLLEGDQESCSDVLAERWGSLRSRVDALADEVGWSDSLSHRLYLFHTAMGMVAMDAKKPAAAXXXXXXSKGGGSGDLPRAGEMMAGLARQSHTLAVYLGLEDVPDASGSLLTPRCPRYHRRGKVHHTHTPFSSLTFSVTIRRGGGHEQPFPLNTNXXXXXXXXXXXXXXXXTAADGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVALTLRLKVLALAASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANRALAHRQQ---PQPLXXXXXXXXXXXXXXXXAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEQEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDVKPSPSRGESWDLGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNGXXXXXXX--------SFLHRVSAHALACPANHMSGARLLTALLPPESPAALHRLVLPVATAXXXXXXXXXXXXXX------------XXXSDGGS-----VGRLVGRVHTAAALEQSEGFRRQAVAALERRVREMLKRWDVCVAGDLFPLKEAAAAEAGPDVDGGGAGEEGTGDKSGNGAFDGXXXXXXXWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELAR-RAVGIGPMTARALCASLVRSLIGCIERYMGQSQPLDGRSDKDREVSWESVCRVLTVILAVSDNPHSGAGRVGLLLGGVIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQV 1901
BLAST of mRNA_H-paniculata_contig293.7991.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE) HSP 1 Score: 1718 bits (4449), Expect = 0.000e+0 Identity = 1171/2082 (56.24%), Postives = 1311/2082 (62.97%), Query Frame = 1
Query: 160 GEVDEVKFREAVVVRMLQVVPHGEVPSGLSLPPTFRSVTQSEPFFLEVFCKDLNNPSNTYFEKLVPKTQVAGGAFFTLPQEVLTNHLILRGSFQAMSVVISGTVIPRPNLSPAALQALMSAGKPSAGAPSA--SALVPXXXXXXXRGPMSTVNPGMTDAVXXXXXXXXXQNRGPACAAGQPGVPAVGPSANAE-----------------------GNAPGRPGAGKTSSPSPPLPTATAPKESLLPKSWEPLVLPPVSSVVKPVESTTVVSSGLGATSAGKTGGGGIAPGDLAPYGEAGLSVALSAPPERLRRRVAEANPFDERLLVPAEAARKLREAVTQLSSLANEVGPAGREAECKGLESTAESVEACFRHAAARGASVKTPANGGEGEARGGNE------TEGK-ATPIPSGEVFDEDVSWRLATAVIRSLRGFRFAGAGTEAAAVPGELG--------HTPEVRICPDGSVSVDDGPRRVALAGLRLAGAAATAPGPARALLESGVFHVLWRLPSDPAATPAGIALALGALCQGVRHAEILQVFSTKME---------IKQEGSSVHLGGYEACAAVLSGQVAHPAALARVRSIMQYVALVECLKLVRNLAAKVGAASMGMTQSVVSKSGAG------------------------------KRPATAPGSVKGMEELAHALGALEALLSEGAGGTSASGMQPGIGKGDRKRRLQGFEVLLAKLDGEK-DASNAA-----SRNEGDDAGXXXXXXXXXXXXXXXGEAANNPGVAAAISAHRGREAARDKRPRGGLAPSLMSLLWEHQLPAALAAGVTAAARASEEAAEAATMGRRGEESTETGAGAGEGPTSAAA--------ALVFAAVRQVILRLLRGAGDPVSGALVFAGQPRSTAALAFALDPSSLATPVRPEGGPSMEILADGLDETLVSPGGLARLLIRSCQALSAADLALSLDDETAESG------GGGNRXXXXXXXXXXXXLASSGAVSFLSGGAEGDMTAAIRMLHELGPSAAGR-------SAACEVICRHALPAVLSPPSGGXXXXATVTSSLLLWILEADQETCSEVLAERWKALMSRVATLAGEVGWADSLSHRLYLFHKAMDMVAADARSEDIDSSDS------GNGDLPRAGELMAGLKRQSQTLAVYLGLEDAPDL------PPDTS-ELSDTDLMGSG----------------------------------------KASARLLPRTEEERRRAAAPVIVALTLRLKMLALAAARGLGASYSAFAGGAAVPALAGVVEILAFGLAKAGANRALAHRVRLGRAGRAAVAARAEMTVTAARTRSSA-------------------------------------------------------------------------------------PPRLKDPSKEPLLLVGDLFTAPGPGEAEEAELRWEQEPGALASEQRGLEAAEHEARLLACAVPALRLLRHCLGRLADAGAQPPVGPLDAVTALLDLEAALAMLPLDTS-SSTPPGAN---TASEAAAWDSEATPLVGLALRAEALVLSSCRLWCPPRRWSTLR-GSGKGSSAADTEARGSGGSFLHRVSAHALACPANHASGVRLLTALLPPETPTPLHRLNPPEAMAAAAAAGVAATAVADAGGGEQVGVNGAPGSSWGGSSSLSGVGRLVGRVHTAAALERSEGLRRQAVAALERRVGEVRDRWDLCIAGDLFPRAAGTHEEGDEDGEDNDPRATGKXXXXXXXXEE-------GWRPTLAANPILAVTAPGLVNVPAVVVSLCHSTSPVLQARVLELARNRAVDVGPMTTQALGAALVRTLISSIERYIGQSQPLGGRSEKDGDRSWQPVARVLGVILAVADTSRSAAGRVGLLLGGAVEALMPCLGLPKPEVIRSALEVLCSFVEGPRLSEVRRYSEPPCSFATLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSCAADALQALRPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYRHRLTLLKGGKSQEQKGLDLDRRVLRLLRAASWAIQV 5637
G VKFREAVV R++ VVP GE P+ ++LPPTFR +TQ EPF LEVFCK+LNN + YF++L+P V GGA +T+PQ+++TNHL++RGSFQAMSVVI GTV+PR LSP A+QAL + KPS G PS SALVPXXXXXXX XXXXXXXXX G +P PG K S S LPK+W PL LP ++ + V G G T+ G G++P DLAPYGEA LS AL+ PPERL+R AEANPFD+R LVPA+AAR ++EAV +L SL +E GPAGR EC+ L++ A+ +EACFR A + GG G + E T G A +PS E F++DVS LATAVIRSLR FR A AGTEA ++P G HTP V + DGSV+VDDG RRVALAGLRLAGA ATAP PARALL +G FHVLWRLP DPAATP G+ALALGALCQG+RHA++L+VF T+ E + EG S LGGYEACA+VLS QVAHPAAL+R RSIM G G Q + G G A P +VKGME+LAHALGALEAL+SEGAG TSASG+QPGI KGDRKRRLQGFEVLLAK D + DAS+ A S N+ DD P VAAAISAH GREAARDK+PRGGLAPSL++LLWEHQLPAALAAGV ALVFA VRQV LRLLRG+GDP+SGALVFAGQPRSTAALA+ LDPS+LATPV PEG P++E LADGLD QALSAADLALS D++ E+G GG XXXXXXXXXXXX + LSGGAE DMTAA+R LHELGPS AGR S+ CEVICR ALPAVL P GG TVT+SLLLW+LE DQE+CS+VLAERW L SRV LA EVGW+DSLSHRLYLFH AM MVA DA+ + S G+GDLPRAGE+MAGL RQS TLAVYLGLED P+ PP +S S T G G K L PR PVIVALTLRLK+LALAA+RGLGASY AFAGGAAVPALAG+VEILAFGLAKAGANRALAHRVRL RAGRAAVAARAE+T +AR R +A PPRLKDPSKEPLLLVGDLFTAPGPGEAEE ELRWE+EPG + SEQRGLEAAEHEARLL CA+PALRLLRHCLGRL+DAGA+PPVGPLDAV ALLD EAALAMLPLD SS PPG++ + S +WD ATP V LALRAEALVLSSCRLWCPPR WS LR SG G S+ SFLHRVSAHALACPANH SG RLLTALLPPE+P PLHRL P A AA +S GGS VGRLVGRVHTAAALE+SEGLRRQAVAALERRV E+ + WD+C+AGDLFP E DG+ XXXXXXXX GWRP+L NP+LAVTAPG+VNVPAVV+SLCHS SPVL RVLELAR RAV +GPMT +AL AALVR+LI IERY+GQS+PL GRS+KD + SW+ V RVL VILAV+D RS AGRVGLL+GGA+EALMPCLGLPKPEVIRSALEVLCSFVEG R+SEVRRYSEP CSF TLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPS AADALQAL+PRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRY+HRL+LLKGG+ EQKGLDLDRRVLRL+RAA WAIQV
Sbjct: 16 GTPTAVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPGAIQALTVSDKPSLGGPSPLPSALVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASPSGPGPSKDS--------------SSLPKAWAPLALPAAAATAEVV--------GQGGTT-----GDGVSPADLAPYGEADLSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLVDESGPAGRNLECEALDAAADRMEACFRRQTAAKKGEEGGKQGGLGPSPVAVEQGSTLATAGTTAAVVPSSEAFNDDVSGPLATAVIRSLRFFRTAAAGTEAGSIPAGEGEEERGGGRHTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPARALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEGVDDGAGGAEAEGLS-RLGGYEACASVLSRQVAHPAALSRGRSIMHR-----------------GEGGGGDGQGRECRWGRGGCRRGGGGXXXXXXXXXXXXXXXXXXXXAAAAAAAGPAAVKGMEDLAHALGALEALVSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAKADAKTGDASSTAAPDSNSNNKSDD-----------------------PNVAAAISAHLGREAARDKQPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGSGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPEGSPTIEALADGLD-----------------QALSAADLALSTADKSPEAGRGGAVIDGGXXXXXXXXXXXXXXXVAGATTGILSGGAEADMTAALRKLHELGPSLAGRCDVVVKRSSVCEVICRFALPAVLKPLPGGGRASVTVTTSLLLWLLEGDQESCSDVLAERWGLLRSRVDALADEVGWSDSLSHRLYLFHTAMGMVALDAKKPAAAAGGSKRSKGGGSGDLPRAGEMMAGLARQSHTLAVYLGLEDVPEASAHHTHPPFSSLTFSVTIRRGGGHEQPSPFNTXXXXXXXXXXXXXXXXXXXXXXDGDAASIIRKPPPALQPRXXXXXXXXXXPVIVALTLRLKVLALAASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANRALAHRVRLARAGRAAVAARAELTSESARARLAARKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDGKPSPSREESWDFGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNSGGGGSS----------SFLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXX------------XXTSDGGS-----VGRLVGRVHTAAALEKSEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEADAAEAGPDGDGGGXXXXXXXXXXXXXXXXXXXXXXXGWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELAR-RAVSIGPMTARALCAALVRSLIGCIERYVGQSKPLDGRSDKDREVSWESVCRVLAVILAVSDNPRSGAGRVGLLIGGAIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQV 1984
BLAST of mRNA_H-paniculata_contig293.7991.1 vs. uniprot
Match: A0A835ZHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG1_9STRA) HSP 1 Score: 323 bits (829), Expect = 1.720e-85 Identity = 493/1599 (30.83%), Postives = 648/1599 (40.53%), Query Frame = 1
Query: 1288 GKATPIPSGEVFDEDVSWRLATAVIRSLRGFR---FAGAGTEAAAVPGELGHTPEVRICPDGSVSVDDGPRRVALAGLRLAGAAATAPGPARALLESGVFHVLWRLPSDPAATPAGI-ALALGALCQGVRHAEILQVFSTKMEIKQEGSSVHLGGYEAC-AAVLSGQVAHPAALARVRSIMQYVALVECLKLVRNLAAKVGAASMGMTQSVVSKSGAGKRPATAPGSVKGMEELAHALGALEALLSEGAGGTSASGMQ----------PGIGKG---DRKRRLQGFEVLLAK----LDGEKDASNAASRNEGDDAGXXXXXXXXXXXXXXXGEAANNPGVAAAISAHRGREAARDKRPRGGLAPSLMSLLWEHQLPAALAAGVTAAARASEEAAEAATMGRRGEESTETGAGAGEGPTSAAAALVFAAVRQVILRLLRGAGDPVSGALVFAGQPRSTAALAFALDPSSLATPVRPEGGPSMEILADGLDETLVSPGGLARLLIRSCQALSAADLALSLDDETAESGGGGNRXXXXXXXXXXXXLASSGAVSFLSGGAEGDMTAAIRMLHELGPSAAGRSAACEVICRHALPAVLSPPSGGXXXXATVTSSLLLW--ILEADQETCSEVLAERWKALMSRVATLAGE----VGWADS-LSHRLYLFHKAMDMVAADARSEDIDSSDSGNGDLPRAGELMAGLKRQSQTLA-VYLGLEDAPDLPP-----DTSELSDTDLMGSGKASARL--------LPRTEEERRRAAAPVIVALTLRLKMLALAAARGLGASYSAFAGGAAVPALAGVVEILAFGLAKAGANRALAHRVRLGRAGRAAVAAR----------------------------AEMTVTAARTRSSAPPRLKDPSKEPLLLV-------GDLFTA----PGPGE-AEEAELRWEQEPGA---LASEQRGLEAAEHEARLLACAVPALRLLRHCLGRLADAGAQPPVGPLDAV-TALLDLEAALAMLPLDTSSST---PPGANTASEAAAWDSEATPLVGLALRAEALVLSSCRLWCPPR----------------------------RWSTLRGSGKGSSAADTEARG--------SGGSFLHRVSAHALACPANHASGVRLLTALLPPETPTPLHRLNPPEAMAAAAAAGVAATAVADAGGGEQVGVNGAPGSSWGGSSSLSGVGRLVGRVHTAAALERSEGLRRQAVAALERRVGEVRDRWDLCIAGDLFPRAAGTHEEGDEDGEDNDPRATGKXXXXXXXXEEGWRPTLAANPILAVTAPGLVNVPAVVVSLCHSTSPVLQARVLELARNRAVDVGPMTTQALGAALVRTLISSIERYIGQSQPLGGRSEKDGDRS-----WQPVARVLGVILAVADTSRSAAGRVGLLLGGAVEALMPCLGLPKPEVIRSALEVLCSFVEGP-RLSEVRRYSEPPCSFATLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSCAADALQALRPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYRHRLTLLK-------------------GGKSQEQKGLDLDRRVLRLLRAASWAI 5631
G+ + S E F V+ LA AV+ +L F AG + A G + +G V R A A L+L A AP A A +G L R PAG+ ALA+GAL Q +H +L S + E + YEA AA + H A A +M VA ++C++ ++ A + G A++G SG +R A ++ G + L A +A EGA + ++ P G + + L EVLLA+ + G +A R AAN H G AA G +P+L+ LL H + A LA A RA A R G G + AA+R + LRLL G G+ G+LVFA P +T L ALD S+L R G +E LADG + V+P LA LL R+ QA + XXXXXXXX + G E R+ S AGR AAC + +P +L + G T++LL+ I D L + W AL VA LA W L+ RL ++A G + AG L+A L+ + L ++ D + D + SD G GK +A L TE ER + AA ++ L L +ML A A+YS A GA + AL L + LA+ N LA R+R RA +A A A M V + T + D + + + GD A PGP E A E E W GA L+ +R AA H ++L V LRLLR L R+ G DAV A+LD +AA+A LPL T+++ P G ATP LALRAE+L++ CRLW PP S + G+ AA +A G + S + + HALA PA+H +RLL ALLPP P PLHRL +SL L RV AAA+ER +GLR A+ +ER + WDL L P AA A G XXXXXXXX G + I A+TA ++CHS+SP ++A ++A RA G T + + AAL+ L ++ Y+ W PV R L + A+AD AA RV LLL GA+ AL+PCLGLP+PE IR+AL L F G R +E RR+ PP SF +ATAARNV+ KWHRVDL VHA GA+LLA LAA PSCAA L ALRPRGAEAAG EGKTTMLLPRLY+GL KGLED +YR R L + ++G D+D RVL + RAA WA+
Sbjct: 314 GEGRRVSSAEAFSGAVAEDLAEAVVAALAWCTDEGFGPAGGDGAFCDGR-------KTGLEGEAGV-----RAARAALQLLEAMLVAPSLAYAFAAAGGLLCL-RTALLSHRVPAGLKALAMGALAQACQHESLLHAVSAAPDDGGESA------YEAAVAAAMRYGARHGALRACAELVMAAVAALDCVRAAQDCAMEAGLAAVGEPPGA---SGGERRLAALSRALLGKDPLPPVSDAAQAAEPEGADAAAPPPLKRLPQWKPALAPSFGAKPLLELAQALFAMEVLLARPCLPMAGVALLDGSAIRGA------------THANFNINLHAANTAPAELLQEGHSGATAAHR-----GFSPALLRLLRRHGIVATLAVAAAAVGRA------AVADCRHG----------GXXXXXXXXXELLAAIRALALRLLGGGGEAFIGSLVFAAAPEATEVLVAALDGSALRRGAR-GGVLPLEALADGAPQAAVTPSALAHLLARAAQAAA-------------------------XXXXXXXXXXXXXXXXXEAKGEERVPLTLRRLAQVAAASEAGRGAACAALDHALMPLLLGAKAAGA---GAATTALLVSTAIAGVDSVQSGRALLQHWGALSDLVAYLARAPQPIADWGTGELAARLLDLRAPFASISA--------------GGVTAAG-LLASLRGTATELGDLFASATDGAGVDTSGKDIDGDKASDGGEGGDGKGAAAAADGRARMPLLCTELERMQRAAAPLLTLALAARMLHALADASRSAAYSLQAEGA-IAALLRAAGTLTYALARK-TNAPLARRLRAQRAVASATDAADGPKPMSVDSSESTGAEAAXXXXXXXXXAAMDVEDSATEQNGKHNAGDDGSDEVPVPPPHDSWSGDAAVADLVWPGPSETAAEEEALWGDGKGAAPALSPAERQAVAARHTRQVLGALVACLRLLRLLL-RVLPRGGDDDAQLRDAVMAAILDGQAAIACLPLATAAADTTLPEGCT-----------ATPTTVLALRAESLIVGVCRLWLPPHCCDASDXXXXXXXXXXXXXXXEAHHQDGSASPMAVDGEHIEAAVADADGDEAESSAVTAASTMQLIYKHALAAPAHHLGALRLLHALLPPAVPPPLHRLP----------------------------------------ASLPERDELAARVRLAAAVERKDGLREAALDEVERHMAWHLHCWDLA----LTPAAAAASVAAAS--------ADGXXXXXXXXXXXGAPRASSDGSIGALTA-----------AMCHSSSPQVRALAADVAA-RAAGAGAATARGVTAALLADLQRCVDTYLAGPAAXXXXXXXXXXXXXXAAPWLPVCRALQAVHALADADGGAA-RVALLLQGALAALLPCLGLPRPEPIRAALCALRPFCSGSGRAAEARRHGAPPTSFGVVATAARNVMGKWHRVDLRVHADGAQLLAALAAVPSCAAHVLGALRPRGAEAAGAAVGEGKTTMLLPRLYSGLVKGLEDAQFKYRARAALAXXXXXXXXXXXXXXXXXXXXSAGTDARRGDDIDARVLLVARAACWAV 1734
BLAST of mRNA_H-paniculata_contig293.7991.1 vs. uniprot
Match: A0A7S4DEG1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEG1_HETAK) HSP 1 Score: 127 bits (320), Expect = 4.760e-29 Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 109 VLFFGEFTHYDQAPTDGGEVDEVKFREAVVVRMLQVVPHGEVPSGLSLPPTFRSVTQSEPFFLEVFCKDLNNPSNTYFEKLVPKTQVAGGAFFTLPQEVLTNHLILRGSFQAMSVVISGTVIPRPNLSPAALQALMSAGKPS 534
+LF G+F H D ++DE+ FREAVVV+ Q+VP G P +L P F+SVTQSE F LEVF KDL++P T F++L P+ + GG F E +TNHLILRGS+ A+S+ + G VIPRP LSP L A + G PS
Sbjct: 7 ILFVGDFQHKDLEI----DIDEITFREAVVVKGFQIVPAGTNPHPETL-PNFKSVTQSEKFNLEVFAKDLSSPGKTSFDRLTPRFEGQGGVTFNTQDEQITNHLILRGSYTALSICLYGNVIPRPQLSPEVL-ATLEKGVPS 142
BLAST of mRNA_H-paniculata_contig293.7991.1 vs. uniprot
Match: A0A1Y1IHP4_KLENI (VIR_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHP4_KLENI) HSP 1 Score: 64.7 bits (156), Expect = 2.420e-6 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 106 QVLFFGEFTHYDQAPTDGGEVDEVKFREAVVVRMLQVVPHGEVPSGLSLPPTFRSVTQSEPFFLEVFCKDLNNPSNTYFEKLVPKTQ-VAGGAFFTL-PQEVLTNHLILRGSFQAMSVVISGTVIP 477
+VL+ F H +A D VDEV F++ V+V +VP P L F S+T PF L+VF + + + ++F+KL P+ VA G ++ PQ V+T HL+ RG++Q +S++I G IP
Sbjct: 2 EVLYCDSFLH--EAAAD--HVDEVLFKKPVIVSACHIVPKDGNPEPELL--EFFSLTSPPPFNLQVFYHN-GDQNASHFQKLGPQISWVADGGKESIDPQPVVTRHLVFRGNYQNLSLIIYGATIP 120
BLAST of mRNA_H-paniculata_contig293.7991.1 vs. uniprot
Match: A0A388KCM5_CHABU (VIR_N domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KCM5_CHABU) HSP 1 Score: 61.6 bits (148), Expect = 2.190e-5 Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 109 VLFFGEFTHYDQAPTDGGEVDEVKFREAVVVRMLQVVPHGEVPSGLSLPPTFRSVTQSEPFFLEVFCKDLNNPSNTYFEKLVPKTQVAGGAFFTLPQEV-LTNHLILRGSFQAMSVVISGT 468
VL F H + TD +DEV+F V++ +V E P L F+ +T F L++F ++L PS+ FE+L + A G TL EV +T+HL+LRG++Q++S++I G+
Sbjct: 47 VLLCESFIH--ERATDN--IDEVRFDHPVIISACSIVDQNENPHP-DLLQDFKGITTPPTFTLDIFVRNLIKPSDR-FERLSQRLVYAHGTQETLGVEVTITDHLVLRGTYQSVSLIIYGS 161 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig293.7991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig293.7991.1 >prot_H-paniculata_contig293.7991.1 ID=prot_H-paniculata_contig293.7991.1|Name=mRNA_H-paniculata_contig293.7991.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1880bp MHGRDPRGNGMGSPGGDLNFHPHPPPPPPPQVLFFGEFTHYDQAPTDGGEback to top mRNA from alignment at H-paniculata_contig293:26955..42113+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig293.7991.1 ID=mRNA_H-paniculata_contig293.7991.1|Name=mRNA_H-paniculata_contig293.7991.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15159bp|location=Sequence derived from alignment at H-paniculata_contig293:26955..42113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig293:26955..42113+ >mRNA_H-paniculata_contig293.7991.1 ID=mRNA_H-paniculata_contig293.7991.1|Name=mRNA_H-paniculata_contig293.7991.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=11280bp|location=Sequence derived from alignment at H-paniculata_contig293:26955..42113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |