prot_H-paniculata_contig293.7988.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig293.7988.1
Unique Nameprot_H-paniculata_contig293.7988.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length548
Homology
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BLAST of mRNA_H-paniculata_contig293.7988.1 vs. uniprot
Match: A0A6H5KGW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW2_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 2.320e-46
Identity = 95/203 (46.80%), Postives = 134/203 (66.01%), Query Frame = 0 
Query:  121 PALKIALARFEEDCKPWMEAGRPEGDGAAAAVLDGLLKMDALVRQSVESTHVPPPYVERLSAVYGKSALEIKSMLLALRREESKREYTRLRDELESLKTDFLHKVAANVTAQKGADGQPQSPSFHWTDPLRGLLHDLMRAFEAWATKALSGLRTKQAVIASKELYDQLSQAWPAELPMSADDLKKMYLNEKRRIKTKANKEAA 323
            P L+ A  RFE+D K W+++GRP GDGA   VL+ +  +DALVR+S    H   PY+ RLSAVYG+    +K++L  L+  +  +E  RL  E  SL+ +F   V  +V  Q+ A+G P +P + W+DP+R  LHD++RA EAW  K   G  T++A+   K ++D+LSQ WPAEL ++AD +KKMY NEKRR+KTKA +EAA
Sbjct:  320 PELEAATVRFEQDSKAWVDSGRPAGDGAQV-VLEAMRTLDALVRRSSLDAHSKDPYLGRLSAVYGQPQAAVKTVLATLKDRDDTKEAARLHQEYRSLRANFETNVDQSVELQR-ANGSPLAPPYVWSDPVRLCLHDMLRACEAWIAKEHGGRLTRKAIEGMKNIFDELSQRWPAELEVTADQIKKMYTNEKRRMKTKAQREAA 520
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig293.7988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGW2_9PHAE2.320e-4646.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..547
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig293contigH-paniculata_contig293:19847..23971 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig293.7988.1mRNA_H-paniculata_contig293.7988.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig293 19500..24561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig293.7988.1 ID=prot_H-paniculata_contig293.7988.1|Name=mRNA_H-paniculata_contig293.7988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=548bp
MAAAGASAAGVQGQVTETNSGSSASSAPSAATTAAAIHHYKANGGTPGIP
MAMMVAGGVVTMERDAAGGVVVGMGSGDAATFGSDGGSGATVAAGSSAGK
GGGDVKTAATNSILMGQSLDPALKIALARFEEDCKPWMEAGRPEGDGAAA
AVLDGLLKMDALVRQSVESTHVPPPYVERLSAVYGKSALEIKSMLLALRR
EESKREYTRLRDELESLKTDFLHKVAANVTAQKGADGQPQSPSFHWTDPL
RGLLHDLMRAFEAWATKALSGLRTKQAVIASKELYDQLSQAWPAELPMSA
DDLKKMYLNEKRRIKTKANKEAALTAPAGGSPVDLARDPVSKEATHRVAM
VGAATTTTTAPSPAQKNAAGGAATAAGDTVVAAGVTVASPPRLSNFTGPP
SVGHTTAVSPLTATPGAATVATVAAPSTPAAMRPFSHTMSTVPTVAASPK
NAPVSAGAFTASVASSPHAPLPISAAVEACSSDAALTDTRLPSSLGFDFP
PRAVTFEAPPEFDESDFFDEVDDDEDGVEESYTVTSYRGYDSVTDGQ*
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