mRNA_H-paniculata_contig293.7988.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig293.7988.1 vs. uniprot
Match: A0A6H5KGW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW2_9PHAE) HSP 1 Score: 182 bits (462), Expect = 6.220e-45 Identity = 95/203 (46.80%), Postives = 134/203 (66.01%), Query Frame = 1
Query: 736 PALKIALARFEEDCKPWMEAGRPEGDGAAAAVLDGLLKMDALVRQSVESTHVPPPYVERLSAVYGKSALEIKSMLLALRREESKREYTRLRDELESLKTDFLHKVAANVTAQKGADGQPQSPSFHWTDPLRGLLHDLMRAFEAWATKALSGLRTKQAVIASKELYDQLSQAWPAELPMSADDLKKMYLNEKRRIKTKANKEAA 1344
P L+ A RFE+D K W+++GRP GDGA VL+ + +DALVR+S H PY+ RLSAVYG+ +K++L L+ + +E RL E SL+ +F V +V Q+ A+G P +P + W+DP+R LHD++RA EAW K G T++A+ K ++D+LSQ WPAEL ++AD +KKMY NEKRR+KTKA +EAA
Sbjct: 320 PELEAATVRFEQDSKAWVDSGRPAGDGAQV-VLEAMRTLDALVRRSSLDAHSKDPYLGRLSAVYGQPQAAVKTVLATLKDRDDTKEAARLHQEYRSLRANFETNVDQSVELQR-ANGSPLAPPYVWSDPVRLCLHDMLRACEAWIAKEHGGRLTRKAIEGMKNIFDELSQRWPAELEVTADQIKKMYTNEKRRMKTKAQREAA 520 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig293.7988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig293.7988.1 >prot_H-paniculata_contig293.7988.1 ID=prot_H-paniculata_contig293.7988.1|Name=mRNA_H-paniculata_contig293.7988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=548bp MAAAGASAAGVQGQVTETNSGSSASSAPSAATTAAAIHHYKANGGTPGIPback to top mRNA from alignment at H-paniculata_contig293:19500..24561- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig293.7988.1 ID=mRNA_H-paniculata_contig293.7988.1|Name=mRNA_H-paniculata_contig293.7988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5062bp|location=Sequence derived from alignment at H-paniculata_contig293:19500..24561- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig293:19500..24561- >mRNA_H-paniculata_contig293.7988.1 ID=mRNA_H-paniculata_contig293.7988.1|Name=mRNA_H-paniculata_contig293.7988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3288bp|location=Sequence derived from alignment at H-paniculata_contig293:19500..24561- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |