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Homology
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A6H5KSN1_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSN1_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.640e-83 Identity = 159/206 (77.18%), Postives = 167/206 (81.07%), Query Frame = 2
Query: 197 MADEVDFEGDYEEEQAMDDADEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXXSNGKVAKSGRKSGTKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVRG-KGTGQPGRRR 811
MADEVDFE +YEEEQ MDDAD G XXXXXXXXXXXXXXXXXX GK GRK G KGRGHQ SM+VEDRYEGRGGVFESVD G +GGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEK+EEA+ AI EMDGSQLL+QDISV+WAFV+G KG GQP RRR
Sbjct: 1 MADEVDFEPEYEEEQPMDDADNGQAGGREGQAXXXXXXXXXXXXXXXXXX----------KGGK----GRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGSAGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLDQDISVSWAFVKGGKGAGQPRRRR 192
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A7S2G621_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G621_9STRA) HSP 1 Score: 177 bits (450), Expect = 7.530e-52 Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 2
Query: 401 GRKSGTKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFV---RGKGTGQPGRRR 811
G+ G K +G + E+RY+GRGGVFESVD G GGP +SVEGWILFVRNVHEEAQEDDI+DKFSE G V+N+HVNLDRRTGFVKGY LVEFE REEAE AI ++G +LL Q ISV WAF+ GK G+ G RR
Sbjct: 35 GKGGGGKQKGRGFKGGNDEERYDGRGGVFESVDAGGEGGPLQSVEGWILFVRNVHEEAQEDDILDKFSESGDVRNIHVNLDRRTGFVKGYALVEFESREEAENAIETLNGEELLGQTISVDWAFLDAGSGKKKGRKGGRR 174
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A7S2DBP5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBP5_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.050e-51 Identity = 87/132 (65.91%), Postives = 99/132 (75.00%), Query Frame = 2
Query: 416 TKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVRGKGTGQPGRRR 811
TKGRGH +MD EDRY+GRGG+FESV+T GP SVEGWILF+R VHEEAQEDDI+DKF E G V+N+HVNLDRRTGFVKGY LVE+E EEA AI +G +LL Q ISV WAF+ G P RRR
Sbjct: 30 TKGRGHTGTAMDTEDRYDGRGGIFESVETADGVGPAESVEGWILFIRGVHEEAQEDDILDKFLECGEVRNIHVNLDRRTGFVKGYALVEYESFEEATSAIETFNGQELLGQTISVDWAFLSDSGK-HPRRRR 160
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A7S3GV69_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV69_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.090e-47 Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 2
Query: 386 KVAKSGRKSGT---KGRGHQA-LSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVR 778
K SGRK T KGRGH + D DRY GRGGVFE++ G GP +S+EGWI+FV NVH+EAQEDDI+DKFSEYG VKN+HVNLDRRTGFVKGY LVEFE+ ++A+ AI +DG +LL+Q I V WAF +
Sbjct: 25 KAGSSGRKVTTVMTKGRGHNSGHDGDDGDRYNGRGGVFENIQRGSGAGPLQSIEGWIVFVTNVHQEAQEDDILDKFSEYGTVKNIHVNLDRRTGFVKGYALVEFEELKDAQAAIQGLDGKKLLDQVIQVDWAFKK 159
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A7S2S198_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S198_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.050e-44 Identity = 78/128 (60.94%), Postives = 100/128 (78.12%), Query Frame = 2
Query: 392 AKSGRKSGTKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFV 775
A +G+ KGRGH A +MD E+RYEGRGGVF+S+ G GP +SVEGWILFVR VHEEAQEDDI+DKF+++G V+N+ VNLDRRTGFVKGY L+E+ + +EA A+ M+G ++L Q ISV WAF+
Sbjct: 30 ASTGKSVKRKGRGHVA-AMDAEERYEGRGGVFDSI-AGDGPGPAKSVEGWILFVRGVHEEAQEDDILDKFADFGEVRNIAVNLDRRTGFVKGYALIEYAEHDEAAKALEAMNGDEILGQTISVDWAFL 155
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A6U2CUA9_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A6U2CUA9_HEMAN) HSP 1 Score: 156 bits (394), Expect = 2.310e-43 Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 2
Query: 386 KVAKSGRKSGTKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVRGKGTGQPGRRR 811
KV +GRK +G A M+ E+RY GR G FESVD GP +SVEGWI FV ++EEA E+D+ DKFS++G +KNL + LDRRTGFVKGY LVE+E R+EA+ AI EM+G++ +EQ ++V WAF +G G+ RR
Sbjct: 38 KVDSAGRKVKGRGAKDAAAQMEAEERYSGRAGQFESVDNEGGKGPAKSVEGWICFVTGINEEANEEDVYDKFSDFGEIKNLQLPLDRRTGFVKGYALVEYELRKEAQAAIEEMNGAEFMEQTLTVDWAFTKGPFKGRQSTRR 179
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A7S0E2Z3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2Z3_9CRYP) HSP 1 Score: 154 bits (389), Expect = 6.390e-43 Identity = 79/143 (55.24%), Postives = 102/143 (71.33%), Query Frame = 2
Query: 386 KVAKSGRKSGTKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVRGKGTGQPGRRRR 814
KV +GR+ KGRG S EDRY G+ G FESVDT GP +SVEGWI+FV +HEEA E+DI DKFSEYG +K + + LDRRTGFVKGY LVE+EK+ EA+ AI +M+G++L+EQ ++V WAF +G G+ RR+
Sbjct: 17 KVDNAGRR--VKGRGTGDGSTR-EDRYAGKSGQFESVDTEGGPGPSKSVEGWIVFVMGIHEEANEEDIYDKFSEYGEIKQMQLPLDRRTGFVKGYALVEYEKKSEAQKAIEQMNGAELMEQTLTVDWAFSKGPIRGRASTRRK 156
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A0G4H5U6_9ALVE (RRM domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H5U6_9ALVE) HSP 1 Score: 153 bits (386), Expect = 1.450e-42 Identity = 76/134 (56.72%), Postives = 95/134 (70.90%), Query Frame = 2
Query: 377 SNGKVAKSGRKSGTKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVR 778
+ G +A+ R G GRG M +RYEG+GGVFES+ SG +SVEGWI+ VR +HEEAQEDDI D FS YG +KNLH+NLDRRTGFVKGY L+E+E+ +EA+ AI M+G +LL Q + V WAFVR
Sbjct: 12 NGGGIAEERRIKGRGGRGGGDADMTDVERYEGQGGVFESLSHDASGTAAKSVEGWIVIVRGLHEEAQEDDIHDSFSGYGEIKNLHLNLDRRTGFVKGYALIEYEQFDEAQAAIHAMNGKELLSQPVHVDWAFVR 145
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A7S3JPB2_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPB2_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.850e-42 Identity = 80/135 (59.26%), Postives = 96/135 (71.11%), Query Frame = 2
Query: 419 KGRGHQALSMDV--EDRYEGRGG-VFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVRGKGTGQPGRRRR 814
KGRGH+ + E+ EGRGG FES+D S GP +SVEGWILFV NVHEEAQEDDI+D F E+G VKN+HVNLDRRTGFVKGY L+EF ++ +AE AI E++G + Q I V WAF + T Q RRRR
Sbjct: 23 KGRGHRPRRRESFDEECLEGRGGGYFESIDDS-SYGPVKSVEGWILFVSNVHEEAQEDDILDTFGEFGQVKNIHVNLDRRTGFVKGYALIEFAEQAQAEAAITELNGKDMFGQSILVDWAFCKENSTSQYSRRRR 156
BLAST of mRNA_H-paniculata_contig2929.7986.1 vs. uniprot
Match: A0A834LVG0_RHOSS (RRM domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LVG0_RHOSS) HSP 1 Score: 151 bits (381), Expect = 8.400e-41 Identity = 74/132 (56.06%), Postives = 96/132 (72.73%), Query Frame = 2
Query: 416 TKGRGHQALSMDVEDRYEGRGGVFESVDTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVRGKGTGQPGRRR 811
TKGRG + D DR G F+S+D+ GP+RS+EGWI+ V VHEEAQEDD+ + F E+G +KNLH+NLDRRTGFVKGY L+E+E R+EA+ AI+EMDG++LL Q+I+V WAF RG + RRR
Sbjct: 49 TKGRGFRQ-ETDAADRNTRLAGRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYENRDEAQKAISEMDGTELLTQNITVDWAFSRGPFKRRNMRRR 179
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 260.4 |
| Seed ortholog evalue | 7.2e-67 |
| Seed eggNOG ortholog | 2880.D7FPG0 |
| Preferred name | RBM8A |
| KEGG ko | ko:K03037,ko:K12876 |
| KEGG Pathway | ko03013,ko03015,ko03040,ko03050,ko05169,map03013,map03015,map03040,map03050,map05169 |
| KEGG Module | M00341,M00430 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000018,GO:0000184,GO:0000226,GO:0000335,GO:0000337,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0000578,GO:0000956,GO:0001709,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007017,GO:0007028,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007173,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007294,GO:0007308,GO:0007309,GO:0007310,GO:0007314,GO:0007315,GO:0007316,GO:0007317,GO:0007350,GO:0007351,GO:0007389,GO:0008104,GO:0008150,GO:0008152,GO:0008298,GO:0008358,GO:0008380,GO:0008595,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009892,GO:0009893,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010528,GO:0010529,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019094,GO:0019219,GO:0019222,GO:0019439,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030425,GO:0030706,GO:0030716,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031503,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0034655,GO:0035145,GO:0035282,GO:0036477,GO:0038127,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043900,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044463,GO:0044464,GO:0044703,GO:0045165,GO:0045184,GO:0045292,GO:0045451,GO:0045595,GO:0045910,GO:0045934,GO:0045995,GO:0046483,GO:0046595,GO:0046700,GO:0046907,GO:0048024,GO:0048468,GO:0048469,GO:0048477,GO:0048518,GO:0048519,GO:0048523,GO:0048599,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050684,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051052,GO:0051053,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051252,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051663,GO:0051704,GO:0051716,GO:0060255,GO:0060281,GO:0060284,GO:0060341,GO:0060810,GO:0060811,GO:0065007,GO:0070013,GO:0070727,GO:0071013,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0120025,GO:0120038,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1902875,GO:1903311,GO:1903429,GO:1904580,GO:1905879,GO:1990904,GO:2000026,GO:2000241 |
| EggNOG free text desc. | establishment of pole plasm mRNA localization |
| EggNOG OGs | KOG0130@1,KOG0130@2759 |
| Ec32 ortholog description | RNA recognition motif domain |
| Ec32 ortholog | Ec-14_004800.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03041,ko03051 |
| Exons | 5 |
| Model size | 950 |
| Cds size | 621 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2929.7986.1 >prot_H-paniculata_contig2929.7986.1 ID=prot_H-paniculata_contig2929.7986.1|Name=mRNA_H-paniculata_contig2929.7986.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
MADEVDFEGDYEEEQAMDDADEGAEEQEEQEGQEEEDDENAEAGGGREGG
GQGAAAANGGSNGKVAKSGRKSGTKGRGHQALSMDVEDRYEGRGGVFESV
DTGPSGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDR
RTGFVKGYCLVEFEKREEAELAIAEMDGSQLLEQDISVTWAFVRGKGTGQ
PGRRRR* back to topmRNA from alignment at H-paniculata_contig2929:5397..13032+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2929.7986.1 ID=mRNA_H-paniculata_contig2929.7986.1|Name=mRNA_H-paniculata_contig2929.7986.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7636bp|location=Sequence derived from alignment at H-paniculata_contig2929:5397..13032+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAACAACGTAGATTAGCCACCAAAAAACAGGCGTTCCTAGTCGGGGGACA
GTTCCGTGCTTGCTCGACCATCTTGTCCCGGCCTGGGGTGCTCGTTCTTC
GGTGTTGTTGTTACAAGAGGACACAGCAGACCAGCAAGATCAGGTGCACG
GTACATGTTGGTGTCTGTCTCGTACTCATCGCGGTGGACAGAGGATTCGG
CGTTGGCCCTTTCGTCCTTTCGTTGTTGATAATTCAAAAGACAGGGACAG
TTGTGGTGCTGATGTGCCACCACCATCCCACACAACGCCCAGCAGACAGG
GGCATGGTGGAACGTGTTTGGTGTTTGAACAAAAATGACCTTAGAAATGC
GTAGGGCGCTGTGTACTTGAGGAATTGTTGTGACTCTGGGGGAAGTGGAG
GAGGCTTTGTTGTTGAGAGCTTCCAGATCTGCTGTTCGCTGTTGGTGATC
ACCATTTGTGTCCATTTGTGTTTCTAAGAGAAACAAATTGAGGACAGCTG
GGGGAAGTGGCGAATTATGAAAAATGACTCCGAGTTTCGAGCAGCAGCGC
CAAAACCTAGCAGTGCTGCTTTGTTCTTTGCGCCCATCTAAGAGATTACA
ACTATAAATAATTGGGATACACACGGTGTGTGGCCGCCTTTGCGCCGTGG
TGCTGCAGAGCATTGAATCGCACGCCTTCGCCACTTGTCTTTGTTGGAGA
AGCCTTAGTCTGAAGAACTAGCACACCCTCAGTTCGTTTCGATCCTGGGG
TTCAAATGGCGCGTAGTGCAAACGAGGGTAGTTTCGTCCCAAAAACACGA
TGGGGGGACGCAAAATCCAATGTTGCATAGCTTTCATGTGCAGCTGACGG
TGGCACGCTTGGCCATAACGCTATAGCGACACCGACAGCAGTCGGCGAGC
CTTGCGAGAGGAATTGCATGTGTCGCCGATCATCAAAACACCACATTTGT
GTTCAAAAATATAAGAATATGGTAAATAAGACAGTAAGCTACAAAGAAGT
CAGAGGGATACCCAGTCTCAAAAGTAGCATCAGCTACAAGTAGCCACTTT
TTTTTTTTACATTCTTCCCAAAATGATTCGCAGCACGGCGTGATGAATGA
GTCCTGGCAAAGGAGACAAAGTGTATAGTCAGTTACTCATACACAGTGAT
CGTCAACCTCTATGAATACATTTCCCCTAAAGTTAGACCCAGTCACTTTC
TCCCATTTATCGCTTTTAGCGTTTACAAGCAGCTCGTGTGCTTCGAAGCC
CTCATCTCTTATAACGCCCGATCGTTAGGTACGCCCTGGGGAATATTAAG
TACCGCAGTACCCTTTGTTAGCGCCCCCGGTGCAAAGCGAAATTATAAAC
TTGGTCATGACGGAATCGCACCGTGCGATAACAACGTCGGGGATGCGATG
ATGGGAAAACTCCTTCGCCGAAGGAACGGGCGATGGCGCACCATGCGAAA
GTAAAGAACTCGTGCTCGGTGCTGGGGGTTGAGAAGAGGTTCAATCGTCA
TTGGTGTGGTTCGGACAGAGAGTTCCTTAATTGGTGCGTTTAGAGGTTAC
CTCAGTAGTGCAGATAGTACCAGCACAACGCAGAAAATACTGTCGAGCAA
TGTCGTCCACGCCAGAAACTCAACTCGAAGCGGATTCTCATCATGACCCG
CATCTGTAATCTCGCTGGCACCCCCTTTTGTTCTCGTACCGGGTGCGATA
ACCACGTGGGGGATGCTAAACACAAAAAATTCGCTTGTGACAGTCCGCAC
GATGTGATATCAAAGGGGGGCGGGCGATAATAAAGAGTATTACGGTGTCA
AATGAGCCCCCGGAAATCGTTCGCCCCGGGGCGGTGCTACCCGTCATACT
CCTTGTCATATTGGGGATATTAAAGTAACAGCCCGTCCCAAAAAACGCCC
GAGGGGTGTCAACAGCATGGCGTTCGTGAGAACACCCCGGGGCGATTGGC
TTTTTGCGCAGAAGTACTGGTTGTTGTTAACAGGCGAATACCACAGTCTC
TGAAATTATCTTGTTCTTGGCCTCTTGCTCGTCGACGCTCTTGAGATCAG
ACATCGTCCGTCGGCCCCTCTGCGTGCCCATCCGGTTGCTGGATCCCGTT
TTAGGGGCTGCCCAGCGTGAGTTGTGGCCATCTGAGAACTGTTTTCACTA
CGTGATGCTGCGATACCCTCCAAATGACATAACGTTTTCGAATCACGCTC
CGTGGGCGGACATGATGCCCCATGTAATAAAAGATTGAAAAAGAAAAAGA
CACTCGCCCCCCGGTCGTTATGAGAGCCCTTTACTGTTATATATAGAGTA
CATAGTATGGCGAGAGACTTGGAGAAAGTAAGAATGTGCAGACGCCGATC
AAAAGGTACAAATCACTAATCATGAAGCCACCGACCAACCTCTCGTCTCT
TGTCCAGAAAACGACGGCCGCGAGTATTTCGCGTCATAGTACAGTTCGCC
GGTGCGCATGCATGATACCACCTGCACATTCGGTGGCACGCGTTGTCTAA
AATCAAAGCACAGCTGCATCGAGTTAAAGGTCTAATAGGATCAAAATTGA
CATATTAGGACCTGTTTGCACGGAAGATTAGACGCCTACGAAACAACAGG
AGCAGGAAGACGTTTTGGAAGAAATGCTCATCGGCTTCCCAGGTCAACCA
TTAATTAGCTCGTACGTAGCACAGAGCACTTGGAATTTTTATACTTAACC
TCCTTATGTGCAGAGATGTCGTGAACTAAAAATTGCCGTATATAAGGCTA
CGAAACGAAAACGACGGGCAAAACTGTACCTTACGCAATAGAGGGGGGGA
GAGAATGATGGCTACGCCGCGTCTATCTGCAGCTAGCAAAGTTCAAGCTC
TCACGGCCCCGTACACTCGCTGATTATTCCTGATGATTTTTGACCAGAAA
TCATCACAGTACTAGTATCCACCTCGTTGTGTGTTGTGCGTTTGTTCAAT
ACTGCTGGTCTTCTGCTCGACAGCCACGAGTTTTGTAATTGCAGGTAGTA
GTACGGCATCCAGTCGAAAAAATAGAACTGGAGCAGCCGTTTCTTGCCTC
TTTTTTTCTTATCTCGCTTGACTGGTTCAGTTTGTTTGTACCGTAGCGCC
GGCGCGGTAGTCTCGCAATACCGTTGATACCGGTTCGCTAGGGGGAGCAG
TGGGATGTATGCAGAGAGCCCAAAATACCTCGTAATGGTTTTGGCGTAGT
TTTTTCTGACCAGCCTCAAAACAGGGCCAATCAAAACGTTCAACTTTTTC
ACGAATGGCGTTTTGACCAGTCCCTGGTACGGTAGGTAGGTTGGTACTAT
ACCATTTCATGCCTTCCTCCCCTTCTCCCTCCCCTCCCTACGCCCTCCCC
CACTTTACCAAACCACGGTACTCAAGACGACACCAGCAACACTCAACCCG
AAACGCGACTAGCAGCACCAGCAGTAGTCATGGCGGACGAGGTAGACTTC
GAGGGCGATTACGAAGAGGAGCAGGCTATGGACGATGCCGATGAAGGAGC
AGAAGAGCAGGAGGAGCAGGAGGGGCAAGAGGAAGAGGACGATGAGAATG
CAGAAGCAGGGGGGGGGCGGGAGGGGGGGGGGCAAGGCGCGGCAGCTGCC
AATGGCGGCTCCAACGGCAAGGTTGCCAAGAGTGGTAGGAAATCGGGCAC
CAAGGGAAGGGGGCACCAAGCCTTATCTATGGATGTTGAAGACCGGTGAG
AAAGATGACAACTGAACCAAATCTTGCGAGGGACGCGTAGGGGAGTCTTG
GGGGTAGTCATGTTTTGCGTGCCGTTGTTGTCAGACCGTGAAACACGCCT
CCTCGGGAGGACGGAGCCTTCCTATCAGAGTGATTTCTGATGGTCAATCG
CTCTTTCCTACGTTCCCAAGACGTGGCTCAGAATGTATCACTTACCCTAT
CTACCTTAACCCTCGCGTGTTCAGGTCAATTTCTATTATCCTAGAATTGC
TATCGCTGCAGGGGTGAGGGGGAGGGAGCATCTGCGATGGAGTGTAGTTA
TAGTTGTAGTTTCTAAAACATGTGTACTTGGTGTGCAGATGTAAGTTTAC
TCGCGGTTCGCTCCGTTCGTTTTTGTTTTTACAGTAAGGGCCTTGTAAAA
ATACGTCAAAATATGAATCTAAAGTTTTTGAAATAGTAATATTAATATTT
AAAAAAAAAATCGCAAGAAATTGTGCTGAAATTACGGCCCCGTGATAATT
CCTTTACATGACAAATAATAGTAAATTAGAGCTCCATGCTAGCCGGCGTT
TTGCTCCATGTGCTACTTTCACCGACTGCGCTTATATTAACAGCCTACTC
ACGTTGTGGAACTGGGGGGCAAACTAACGCGCGGTTACGTTTTCCCGGTG
TTGCTGATCAGGGCTTTTGATCTTTTTCACGATAAGTTGTCGGTTTGAGC
AGTAGTCGTGGCTCTGCTGACCTCTCCTTATTATTATTATTTTTCAGATA
ATGTTGAAAGCTAGTTTCCCTTATTTGATATAATTTTGCTTATAAGTTCA
CATTCTGATATTTTAGATTTTAGATTTGAGGTCAGCTACATAACCTTGAA
ATGGGTACGATGGACTGATTATTTGAACGTTATAAATTTACCGCCCCCCC
AGTCCCCCTAGTTTTGGTCATTTTGTGGATATAGTAAGTAACCCATCAAC
TTGAAGATGCTGTCATACGTCCATTTAACCCCCGCCCGCCCGCCAAACAA
TGGATAAGGTACGAGGGTCGTGGGGGAGTGTTCGAGTCCGTGGACACAGG
GCCATCTGGAGGCCCCCAGCGGAGTGTGGAGGGGTGGATTCTGTTCGTCC
GCAACGTGCATGAGGAAGCCCAGGAGGATGACATCATGGACAAGTTTTCA
GAGTATGGTGCCGTGAAGAATCTCCACGTCAACCTTGACAGGCGCACAGG
CTTCGTCAAGGTACTTGTGATATGACGTTACTTTTTTTTTTTTTTTTCTG
TGTAATATCGTTGCTGTGGATGTGTATGGAAATGGTCTGTAATATGTACT
GTGGGTGTACGTGATACAATGCATCTTTTGAGTTATGATATGATCTGATT
TGATAGGAGATTCTACTGGTTCGCGCTTGTTCTTTGCGCTTTTTTTAATT
ATTTTTAATTTTTTATCTTTCAGCTCGAGAGGGGTCGAATGAATTTCTCT
GGGGTGACACCTCACATCTGTGCACGCCCCCGCCAGCTTTTCGAGGTGTT
TTTCAGCGCCAATCAGATTCGCGAACAGTATTCGCTGACCTGCCGACAAA
AAACTGAGAAGCATGCTTAGGCTGCGCTTCTTGTTTCACCGAAGCGAGTA
AGTACTCATTCTGATATATATATATACACATGCTATGTATGGGTTATTAT
GAGGCTACCATTAGAGCGCTGAATTTGTTGAGCTGAATTTGAAGGATTTT
AGTGTACAAGCTGGGCCGACCAAGACACAGTTAAAACGGCAGAATCGGGC
AGCTCAGCTCGATTTATTAAATCTTGTCCTGAAATTTTGACACGTGATTT
TGCGACACACTCGTAGAGACATAATCTGGTAAGGTCATTTTTTTTTTTTT
TTTTTTCACGTTACGGCCAAACGAAACACCCACATGAATCGAAAGTCGGT
CATAACTTGACGGGAAAAAAAATGACCTTCGCCTAATGTCTCGACGAGTG
TGTTGCAAAATCACGTGTCAAAATTTCAGGACAACATTCGATAAATTGAG
CTGTGCTGCCCGATTTTTGTACAGTGCCTTTTGCGGTGTACACAGCAGTT
GTATGCATATTGTACAAGAATGCGATGAGGAAAATTGCGCTGACGCTCGC
ATCGAGATTCAGGCCGGTGGATGAGATATGTTCGGCGGAGGTGTGACGTT
GGCAGGATGCAATGTACATTAGCCCCTTCGAAATGAAATGGATGCCTTTG
TTATATCATGTGGAATTAATATTTTAATTATACAATCCACGGCTATCGTC
TTATCCTTACGGATACCAACTTGTACACAATACTAGGACAAGAAATGCAC
GCGTGGCTAGAGGGTACGTTGTAAGTACCTTTTTGCGGATATTACAAACG
TCCGAACATTGCGATGAGGTTGACATGGTACCAACAATATGCATAAAACG
TATGAGGAGGTTGTATGTAAATTGTCAACCTCACCACAGCGTGGACGTTG
CAATATGCGCAACAAGGTACCCCTCTGGTTACGTGTGTGCGCAACTTGTC
CACCCCCCCCCCGACAAATACGAATAATTGCAAATGGTTTCCACAAAAAA
CTCGAAGTATTCGCCTGGGTTTCGGGACGGTACATTATGTACTGCAAATG
GGCGCGCGCCAGGATCCGACAACACGCTCGGCACCAGACAGTAAACAGCG
TATGTCCCAACTAGTATACGTACTGTTTGAATGTAGTGTGCTCTAGCTAT
GTGTGCACGTGAATTGATGTACGTGTGCGCAATGCTTTATGTATGCATAA
ATTTGGTAAAACGGCGGAAGGAAATACGCACGTATGCAATGGTATGTGGG
TCTACATCTGCATATCCTGCATACTTCAGCTCGGCTTGCCACTGAAACCT
TGGATACGAAGGGGCGATCTAAATGAAGGGTGCTAGAATCTGTCGGCAGG
TCGATCGATTAGCAAGGGGCGGTCTAATGATTGTGCTAACAAGCTTGCAT
GTACCTTGAGCGAATTCTTGATTTTGTCATTACATATATATATATACCTG
CCTTGAGACCTTCATGGAATTCTCGGTTTTTCGTGATTAGCTGACATGCA
GACTTTCATTGCAGTGACGATGAAGGTTGATGAAGGTATCGGGACCACTC
CTTCATCCAAGATGTGAATTGTTTTCGATCACCCGCTCGTGTGTTTCTTA
TTGATTTTGCTTTAAGGGTTATTGTCTCGTCGAGTTTGAGAAGAGGGAGG
AGGCAGAGTTGGCGATTGCGGAGATGGACGGTTCTCAGCTTTTGGAGCAA
GACATCTCCGTCACATGGGCCTTCGTTAGGGGTAAGGCCAGGCCGTATCT
TGAACAACACTGTCAAAAAAAGAAGAAGCGGATTTCGTTTTCGTTTCCGT
TTTCGTTTCCGTTTTCGTTTTACTTGTTATGTCCTACGTCGAAGCAGAAA
TGCGGCGTGAAAAAATGAGCCAGCAGCGACCAAGCCTGCACCGTTTTTGG
AAATAAATGCATACAAGACATGCTCTCTCGATGTACAGAACAACTTTCAT
CCAAAGCACCCCATGTTCTGGTGGATTGCGGCTATGTGCTAAGTGTTGGG
CATCTTGTGAGGGTGTTTGACCTTCATCACGTACAGCGACTCTATCATTT
TCCCATTGCTCTTCTGGAGTTTGCTGATTTACCTTTGCCCCCTGCCCTCC
TTCCCTTCCCTCGTCACGTCTCTACCTCCTTCCTGCCTTTCCTCCTTTGT
TTGCTCTTTCGTTCTGTGATTTTTTACATGTCTCTATGTTGCGCTTTGTT
CATATTTGGGTGCAGGCAAGGGCACCGGTCAGCCGGGCAGAAGGCGTCGA
TAGACATAACTCTCTCTCTCTCGCCATTGCGGCGGCTGCTGCTGACCTCG
CAGTGTGGCGAGTGCTTACTATTCCCTCGCTGGTGTGTTGTGTGTATTTG
TTCTCAAACACTGGAAGCGCGGCGCAGGGTGCATTT back to topCoding sequence (CDS) from alignment at H-paniculata_contig2929:5397..13032+ >mRNA_H-paniculata_contig2929.7986.1 ID=mRNA_H-paniculata_contig2929.7986.1|Name=mRNA_H-paniculata_contig2929.7986.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig2929:5397..13032+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGACGAGGTAGACTTCGAGGGCGATTACGAAGAGGAGCAGGCTAT
GGACGATGCCGATGAAGGAGCAGAAGAGCAGGAGGAGCAGGAGGGGCAAG
AGGAAGAGGACGATGAGAATGCAGAAGCAGGGGGGGGGCGGGAGGGGGGG
GGGCAAGGCGCGGCAGCTGCCAATGGCGGCTCCAACGGCAAGGTTGCCAA
GAGTGGTAGGAAATCGGGCACCAAGGGAAGGGGGCACCAAGCCTTATCTA
TGGATGTTGAAGACCGATGGCGGACGAGGTAGACTTCGAGGGCGATTACG
AAGAGGAGCAGGCTATGGACGATGCCGATGAAGGAGCAGAAGAGCAGGAG
GAGCAGGAGGGGCAAGAGGAAGAGGACGATGAGAATGCAGAAGCAGGGGG
GGGGCGGGAGGGGGGGGGGCAAGGCGCGGCAGCTGCCAATGGCGGCTCCA
ACGGCAAGGTTGCCAAGAGTGGTAGGAAATCGGGCACCAAGGGAAGGGGG
CACCAAGCCTTATCTATGGATGTTGAAGACCGGTACGAGGGTCGTGGGGG
AGTGTTCGAGTCCGTGGACACAGGGCCATCTGGAGGCCCCCAGCGGAGTG
TGGAGGGGTGGATTCTGTTCGTCCGCAACGTGCATGAGGAAGCCCAGGAG
GATGACATCATGGACAAGTTTTCAGAGTATGGTGCCGTGAAGAATCTCCA
CGTCAACCTTGACAGGCGCACAGGCTTCGTCAAGGTACGAGGGTCGTGGG
GGAGTGTTCGAGTCCGTGGACACAGGGCCATCTGGAGGCCCCCAGCGGAG
TGTGGAGGGGTGGATTCTGTTCGTCCGCAACGTGCATGAGGAAGCCCAGG
AGGATGACATCATGGACAAGTTTTCAGAGTATGGTGCCGTGAAGAATCTC
CACGTCAACCTTGACAGGCGCACAGGCTTCGTCAAGGGTTATTGTCTCGT
CGAGTTTGAGAAGAGGGAGGAGGCAGAGTTGGCGATTGCGGAGATGGACG
GTTCTCAGCTTTTGGAGCAAGACATCTCCGTCACATGGGCCTTCGTTAGG
GGGTTATTGTCTCGTCGAGTTTGAGAAGAGGGAGGAGGCAGAGTTGGCGA
TTGCGGAGATGGACGGTTCTCAGCTTTTGGAGCAAGACATCTCCGTCACA
TGGGCCTTCGTTAGGGGCAAGGGCACCGGTCAGCCGGGCAGAAGGCGTCG
ATAGGCAAGGGCACCGGTCAGCCGGGCAGAAGGCGTCGATAG back to top
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