prot_H-paniculata_contig2927.7983.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2927.7983.1
Unique Nameprot_H-paniculata_contig2927.7983.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length172
Homology
BLAST of mRNA_H-paniculata_contig2927.7983.1 vs. uniprot
Match: A0A6S9FQI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FQI8_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.280e-11
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 0
Query:   55 VVASRPARSSG-AMRMVDQDVLMAGGVALAGVICGAGLVAFTEAQGERTAQRGSISDTTKQKMSAQFMEDDEMPSNYDVDDVRSRMRAALXXXXXXXXXXXXXXXXXARE-VEEADDGW 171
            VVAS   RSS  ++ MVDQ+V+M   + + G   G GL+AFTEAQGERT +RG +S++   +++   +ED E+ S  D+  + S++ AAL                  ++ +++ADDGW
Sbjct:   39 VVASPTQRSSSTSLCMVDQNVIMGTAIGVGGFAFGIGLIAFTEAQGERTKERGGLSESMSTRIAGALLEDVEVDSVSDLGSLTSQLEAALKETGSKDLDNLEMTEEEKQKMIDDADDGW 157          
BLAST of mRNA_H-paniculata_contig2927.7983.1 vs. uniprot
Match: A0A7S1GJC5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC5_CYCTE)

HSP 1 Score: 68.2 bits (165), Expect = 3.880e-11
Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0
Query:   62 RSSGAMRMVDQDVLMAGGVALAGVICGAGLVAFTEAQGERTAQRGS-ISDTTKQKMSAQFMEDDEMPSNYDVDDVRSRMRAALXXXXXXXXXXXXXXXXXAREV-EEADDGW 171
            + S  ++MVDQ V+    +A+ G+  G GLVAFTEAQGER  +RGS IS+    +++ Q MED E+ S  D+  + S++ AAL                    + EEADDGW
Sbjct:   68 KQSSNLKMVDQSVIEGAAIAVGGLAVGIGLVAFTEAQGERARERGSGISEGMATRIAGQLMEDVEVSSVSDLGSLTSQLEAALKETGGASETELKMSEEDKERIAEEADDGW 179          
BLAST of mRNA_H-paniculata_contig2927.7983.1 vs. uniprot
Match: B8BR10_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR10_THAPS)

HSP 1 Score: 62.4 bits (150), Expect = 4.090e-9
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   67 MRMVDQDVLMAGGVALAGVICGAGLVAFTEAQGERTAQRGS-ISDTTKQKMSAQFMEDDEMPSNYDVDDVRSRMRAALXXXXXXXXXXXXXXXXXAREV-EEADDGW 171
            + M+D +V+M GG+A+AG++ G G+VAF E  GER  +RG  +S     K++   +ED E+ S  D+  +  ++ AAL                  + + EEADDGW
Sbjct:   54 LSMIDANVIMGGGIAVAGLLAGVGMVAFAENMGERAKERGGGLSSDMATKITGGLLEDVEVDSVSDLSSLTEKLEAALKETGGAKEEELKMSEEDMKRIAEEADDGW 160          
BLAST of mRNA_H-paniculata_contig2927.7983.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.390e-8
Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = 0
Query:   57 ASRPARSSGAMRMVDQDVLMAGGVALAGVICGAGLVAFTEAQGERTAQRGS--ISDTTKQKMSAQFMEDDEMPSNYDVDDVRSRMRAALXXXXXXXXXXXXXXXXXAREVEEADDGW 171
            A R   SS  ++M+D  V+  G  A+ G+  G G+  F+E Q E+  QRGS  +S+ T+ KMSA FMED+ +P    +DD  SRM AAL                 A  +   DDGW
Sbjct:   42 APRRQASSSQLQMLDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLPDTT-LDDTVSRMEAALAAAKGEAAVEEKVEEKPASSI---DDGW 154          
BLAST of mRNA_H-paniculata_contig2927.7983.1 vs. uniprot
Match: B7FYG2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG2_PHATC)

HSP 1 Score: 58.2 bits (139), Expect = 1.300e-7
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 0
Query:   61 ARSSGAMRM-VDQDVLMAGGVALAGVICGAGLVAFTEAQGERTAQRGS-ISDTTKQKMSAQFMEDDEMPSNYDVDDVRSRMRAALXXXXXXXXXXXXXXXXXAREVE-EADDGW 171
            AR S A+ + +DQ VL   G+ +AG+  G GLVAFTEAQGER  +RG  +S+    +++   +ED E+ S  D+  + S++  AL                  + ++ EADDGW
Sbjct:   36 ARPSLALNLELDQQVLQGIGIGVAGLAAGVGLVAFTEAQGERAKERGGGLSEGMSTRITGGLLEDVEVSSVEDLGSLTSQLEKALRESGGAKDEVFEMTEEEKKRIQDEADDGW 149          
BLAST of mRNA_H-paniculata_contig2927.7983.1 vs. uniprot
Match: A0A836CFV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.760e-7
Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 0
Query:   61 ARSSGAMRM-VDQDVLMAGGVALAGVICGAGLVAFTEAQGERTAQRGSISDTTKQKMSAQFMEDDEMPSNYDVDDVRSRMRAALXXXXXXXXXXXXXXXXXA-REVEEADDGW 171
            A SS A+ M +DQ+ ++     + G+  G GLVAFTE QG +TA+RG I +    K+ A+ +ED E+  N DV  V  RMRAAL                 A R  E  DDGW
Sbjct:   48 AGSSTAIAMEMDQNTIIGIAAGVGGLALGIGLVAFTEQQGVKTAERG-IDEGMANKLQAKLLEDFELEEN-DVTSVTDRMRAALKQDKTEEELAELAAKQLAARSKEREDDGW 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2927.7983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6S9FQI8_9STRA1.280e-1136.97Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1GJC5_CYCTE3.880e-1139.29Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8BR10_THAPS4.090e-934.58Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4ECZ2_9STRA1.390e-837.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B7FYG2_PHATC1.300e-735.96Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A836CFV7_9STRA5.760e-739.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.808
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2927contigH-paniculata_contig2927:8296..11165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2927.7983.1mRNA_H-paniculata_contig2927.7983.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2927 7320..13423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2927.7983.1 ID=prot_H-paniculata_contig2927.7983.1|Name=mRNA_H-paniculata_contig2927.7983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
MRSTAVVVVALSLFCSCLLPSGTRAFIPAGSPLANSARGEAPRRTAASGV
AAAPVVASRPARSSGAMRMVDQDVLMAGGVALAGVICGAGLVAFTEAQGE
RTAQRGSISDTTKQKMSAQFMEDDEMPSNYDVDDVRSRMRAALRADQTAE
ELAQMTAKATAREVEEADDGW*
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