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Homology
BLAST of mRNA_H-paniculata_contig2927.7982.1 vs. uniprot
Match: A0A078A6X1_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A6X1_STYLE) HSP 1 Score: 87.8 bits (216), Expect = 2.150e-14 Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 3
Query: 84 ARIVEFSSECQGCGASNVLEPNPSKVWLTDPASTLPQYVVVQLK--REPGVMLRTLGWFCWHAYSTNPARINLKLSRDGLLWTRWHSIEVECRAGIQLHKIRPFFPNETPFVKVEIVRSFGACQCYLNRLYLHEE 482
A+IV+ SS GC SN+ + + +W+++ + +PQ VV+ + + + G++C HAYS+NP+ INL +S+DG+ + W S+ + G QL I P P+ +++V I +FGA + Y+N+LYL E+
Sbjct: 49 AKIVQTSSFVNGCHPSNLFVSDQNTLWMSE--NGMPQTVVIDISNLKTKAKFYQCFGFYCSHAYSSNPSLINLFVSKDGIQFKHWTSLNPVFKEGRQLFAIDPIGPSYK-YLEVVIQETFGANRTYMNQLYLLEK 180
BLAST of mRNA_H-paniculata_contig2927.7982.1 vs. uniprot
Match: G0R697_ICHMG (Ferrochelatase n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R697_ICHMG) HSP 1 Score: 85.1 bits (209), Expect = 1.060e-13 Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 3
Query: 39 RTVDRTINVASYAHGARIVEFSSECQGCGASNVLEPNPSKVWLTDPASTLPQYVVVQLK--REPGVMLRTLGWFCWHAYSTNPARINLKLSRDGLLWTRWHSIEVECRAGIQLHKIRPFFPNETPFVKVEIVRSFGACQCYLNRLYL 473
R D +N + +G +I+ +S Q C N+L + + +WL++ LPQ ++ LK ++ +++G++CWH YSTNPA I + +S +G + W I E +AGIQL I P ++K + +FG N Y+
Sbjct: 345 RCPDYNLNFCTEQNGVQILNCTSFSQQCIPQNLLNQHKNSIWLSEEG--LPQSFILDLKNIQQRPRFFKSIGFYCWHDYSTNPAVIEISVSLEGTKFITWVIIRAELKAGIQLFSIDPLGKRYN-YIKFTVKETFGGTSAQCNGRYI 488
BLAST of mRNA_H-paniculata_contig2927.7982.1 vs. uniprot
Match: J9I3A9_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I3A9_9SPIT) HSP 1 Score: 65.5 bits (158), Expect = 2.270e-7 Identity = 35/102 (34.31%), Postives = 62/102 (60.78%), Query Frame = 3
Query: 186 LPQYVVVQL---KREPGVMLRTLGWFCWHAYSTNPARINLKLSRDGLLWTRWHSIEVECRAGIQLHKIRPFFPNETPFVKVEIVRSFGACQCYLNRLYLHEE 482
+PQ +V+ L K++P + G+ C H YS+NP+ I+L +S+DG+ + W ++ + G QL I P P+ F++V I ++GA + Y+N++YL E+
Sbjct: 6 IPQSIVLDLSNLKKKPK-FFQCFGFHCTHTYSSNPSLIDLFVSKDGIQFKHWTTLNPYFKEGRQLFSIDPIGPSYK-FLEVIIKETYGANRTYMNQIYLMEK 105
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 91.7 |
| Seed ortholog evalue | 1.3e-15 |
| Seed eggNOG ortholog | 5888.CAK76819 |
| Hectar predicted targeting category | other localisation |
| EggNOG OGs | 28S19@1,2QYQM@2759,3ZEM3@5878 |
| Best tax level | Ciliophora |
| Best eggNOG OG | NA|NA|NA |
| Exons | 3 |
| Model size | 1843 |
| Cds size | 1758 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2927.7982.1 >prot_H-paniculata_contig2927.7982.1 ID=prot_H-paniculata_contig2927.7982.1|Name=mRNA_H-paniculata_contig2927.7982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=586bp
MAATRTVDRTINVASYAHGARIVEFSSECQGCGASNVLEPNPSKVWLTDP ASTLPQYVVVQLKREPGVMLRTLGWFCWHAYSTNPARINLKLSRDGLLWT RWHSIEVECRAGIQLHKIRPFFPNETPFVKVEIVRSFGACQCYLNRLYLH EEEAADLKRFLGCPGCRGNNNKGKYQRASAGNKRSAGYPLGAGTARVSFG LPDLDVDAHQATSFSLSARRRRASTRNRGYQNLDLIGESLPTASLYSSRR SNGGRIVTSSNLGEGMQSNSGSAYQQSTAKKRDFTAELKALDPLIQSPIV GCLSKRSQRSRIAPRISKFQVPREEENMDACNIFGDCDESDRTGDRGGAL SAVDLRTSYESSDTTAEEAKEGDRADSNEGSGDSQLTRSSADRRKLASWA AGGTVGIGGGPGDIERIQCQNVAKSAVTAESSPPSHSDVGSLNVYVDLVS GSMNKSSSATASPIPANQEAEVEGNKIPSEQRNEYTPGSAAWLSERKSGQ LAAGSRGRTPIGGDNCAAGCSPGKSVDGNRGKEVAAQIDHFSAGALRQAI AHLHGKVRERHVLAARFELQQQIRLEAPDGEHQLM* back to topmRNA from alignment at H-paniculata_contig2927:2667..7054+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2927.7982.1 ID=mRNA_H-paniculata_contig2927.7982.1|Name=mRNA_H-paniculata_contig2927.7982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4388bp|location=Sequence derived from alignment at H-paniculata_contig2927:2667..7054+ (Halopteris paniculata Hal_grac_a_UBK monoicous) GAATATTGTATTGACTGTTGGGACTGATGGCAGCGACTAGGACCGTAGAT
AGGACCATCAACGTAGCAAGCTACGCTCACGGTGCTCGTATCGTGGAATT
TTCGTCAGAGTGCCAAGGATGCGGTGCATCCAATGTGCTAGAGCCTAACC
CGAGCAAGGTAAGTAAGAAGACAGCGACGCGCAACGCCAGTTAAATGTTA
CAACCACATGCAACATATACTACATCACTTGGCCCAATATACTTGCACTG
GGTGGAATCTGGTGTTCCTTCTTATTTTCTTGCCTGTAGGTTAGCAATGA
GCACGCGGCGACGAGTCGCCCATACGTCGTAAGAGTCGGGAAAATGGAGT
AATTAGCTAATTCGCTTTTTTACCAGCTGTGATCTTTCGAAATCTATGGA
AGTCAGTAGTGTAGAGCAAACATCCAATTCAATTGCCAAGCTGTCTCCAC
AATTCAAGTGCTTTTTGAAGAATCCAAAAAGCACACACGCAATGCAGGAT
GGTCCCAGGAAAAACAGGAAGAGTTCGTCCCGGCACTTTTTTTACATTAG
TTTGACGAATTAGAGGCTGAACTTTTGCACCGATGTTTAAATGGCAACAC
GAAACTAACTGATGTTTTCCCCTTTTGAAATAGGAGTTAGATCATGGAAA
ATTCGGCAAAATCGGATTTTAGGCTCTAATAGTTCACCCCCCAGTGCCCC
TCTTTGCCGGATTCCTCGAGATTCACGACCAATATCAAGAAGGGAAAAAG
CAGGACTCTTTATATTGCTTGTAACAATACCTGTGCCAATTTTTAGCCTC
CACTTCACAAACGTGAAGTGAAAAAAATCGAAAAACCCATATCCGGTTCT
GAAGAATGACACACCGAATGTACACAGACCATTTTTCGCGAATTTCTCGA
TAAGTAAGATCGATGTTGAAAAGGGGAAATAATCAGGTTCTTTATATTAG
CATTCACCATATTTGTGCAAAATGTCAGCTTCTATCTCATTAAATTTCAG
GTCAAACTTGGTATGATATCCACTTACGCGCTTTTATTTGTAGGCTGGAA
ACCGGAAAACCTTGAACATCGCGGTTTTTCGCTGAACTCTACGAGTTAGG
CGCTGAAATGTTGCAAAGATGTTGCGAGTGCCAATGCAGAGAAATAAGTT
AGTTCACCCTTTCGATATCGGTGGTACATCTCGAGAAATCCGGTAAAAAC
GGGTTTTGACCCGAATATATTATACTCTAATGCTCGTTTTCTTCGAAATT
CTCAAGAACTACGATTGATGTTGAAAATGGGAAAATTTAACCTTTTTTAT
ATTGTCACGTATAATATCCGTGCTGAATTTCAGCGCCCTAGTAAATTAAT
TTCAGCTTTAAAATCCTGAAAAACTGAAAACCGGATTTTGGAGTACGATC
AGGAATGATAAAAAAAAAAAAATTCTCGATTTTCTCGAGAACTATTACTG
ATGTCTTGAAGGGGAAAGTGTTCATTTTCTTGTATCGCTATTTACGACAT
TTTCGCAATCTGCCAGCTTCTAATTCGTAAAATTTAGCAAAATATGAGTC
GAAAACTGCACCCCTCTTCAGGTGCGCAATATATACATGGCATATTAGCA
TACATATGCGGCTATCTCTAGGTTGCTCAGGAAGCACGGCTCGTAGCATC
AAATGCACCATGTTGAGTTCAATTCGATATATGTTTTGTAGTACTGCCAT
TTCGTATATCGACGGAAAACCTCGAAAAACAAATCTTACGGTTCCTGAGA
CCAGCCAGTATAGTAACCAACGACGACTTCGTATACAATCTGTACACAAG
CCTAACATAACTCGCGCGTCACAGCGGCCATGAGTGGGCGGTTGGAGCTC
CCTCAATCGCTGTTGAGTCTGTAAACCATGCGGATATAGAACGCATGCTG
GAATATGACACAAATGGTGTCCACTCATTGCTTTACATGTTTTTATCCCT
GTGCTGCGAGGTTGCCCTGCTTAAGGTTTTATCGACATGGGCATAAGGTT
CGACGGCTTACAGCATTTATGTTGGCGAATCCATTACATCGGGTACGGAT
AACTATTTCAACCTTTTTTTAATACATATTTTTCCTTGTTTGACAAAGGT
TTGGTTGACGGATCCAGCTTCAACGCTGCCTCAGTATGTGGTCGTTCAGC
TAAAACGGGAGCCTGGTGTGATGCTTCGGACATTGGGATGGTTCTGCTGG
CACGCCTACTCCACTAATCCAGGCGCGTTCGATGTGCCGTTCATGACGAC
AAAAATAGTTTTCAAGGCGAGCAGTAAGTGGGCGTGTGTGTAGCGCATAT
TACCGTTTTCGACAGCTTGATTTTCAGTAAAACCTGTTGTTGTGTAACGG
TTACAGTTCAACCTCAACGTAGAATCGGATATATCTACCCACCGGCCGCA
CGTGGATTCCATACATACAGCAATATTTTCAGAAGTGAGTCACATACGGA
ACGTGAGAAACGCGTAGATCTGGTGATCGACTCTGGCGATGTCCTCGGTC
GGTTGCGTTTTCATGACGAGTGGTGCCTCCCTTATTGATTCTTCTTGGAA
CTTTTCAAAGGCTCAACCGTATTCCCACAGCGGCCCGAACGATCCCCTTG
ACCTGTATGGTGAATAGCTGATGCACAGTAGACAAGTGAGCAAGGTGAGC
ATCATCTTGTCCAAAGAAAAATATGGTACACTAAGCTATGTTGTCCTTCA
ACCTTCGTGCCAATTCCACAACGTCATAATCCTACAAGTCACATTAACCC
AGATTGACAGTACCCGGAATAACTACAACAAACGTACCTCGCCACCCATC
CGTCCCACCGCGAAAACCACACTGCAGCCCGAATAAACCTCAAGCTATCT
CGAGATGGGTTGCTCTGGACGCGCTGGCACTCCATAGAAGTCGAGTGCAG
GGCGGGGATCCAGCTGCACAAGATCCGACCGTTTTTTCCTAATGAAACCC
CTTTCGTCAAGGTGGAAATTGTGCGGAGCTTTGGCGCCTGCCAATGCTAC
CTGAATCGCCTTTACCTACACGAGGAGGAGGCCGCAGATCTGAAACGTTT
CCTGGGCTGCCCTGGTTGCCGCGGAAACAACAATAAGGGAAAATACCAAA
GAGCTTCAGCGGGTAACAAGAGAAGCGCCGGTTATCCTTTAGGTGCTGGC
ACTGCAAGGGTCAGTTTCGGTCTCCCCGATTTGGATGTAGACGCCCATCA
AGCTACGTCTTTTTCGTTGTCAGCGCGCCGAAGACGGGCGTCCACCAGGA
ATCGAGGCTATCAAAATTTGGATCTTATAGGCGAGTCGCTGCCTACTGCT
AGCCTTTACTCTAGCAGACGAAGCAACGGAGGCCGAATAGTCACCAGCTC
GAATCTAGGCGAGGGCATGCAAAGCAACAGTGGGTCAGCGTACCAACAAT
CGACAGCAAAAAAACGCGATTTTACTGCCGAACTCAAGGCGCTGGATCCG
CTTATCCAATCTCCGATCGTGGGATGCCTTTCCAAGAGGTCGCAACGATC
CAGGATCGCCCCACGAATCTCGAAATTCCAGGTACCACGCGAGGAAGAGA
ATATGGACGCCTGCAACATATTCGGGGACTGCGATGAAAGCGACAGAACA
GGCGATAGGGGGGGTGCGTTGAGCGCTGTTGATTTGAGGACGTCGTACGA
ATCATCGGACACGACTGCAGAAGAAGCGAAAGAGGGCGACCGCGCAGACA
GTAATGAGGGCAGCGGGGATAGTCAGCTGACCAGATCATCTGCCGACCGA
CGAAAACTTGCTTCTTGGGCTGCAGGTGGTACCGTAGGAATAGGCGGTGG
CCCCGGCGATATCGAGCGTATACAATGCCAGAATGTAGCCAAGTCCGCGG
TCACTGCTGAGAGCAGCCCTCCAAGTCACTCTGATGTAGGCTCCCTAAAC
GTTTATGTGGATCTGGTGTCGGGCAGTATGAACAAGTCGTCTTCCGCAAC
GGCTTCGCCGATACCGGCAAATCAAGAAGCAGAGGTGGAAGGAAACAAAA
TACCGTCGGAGCAACGTAATGAATATACCCCGGGTTCCGCAGCGTGGTTG
TCGGAAAGAAAAAGCGGGCAGCTCGCTGCAGGTAGCAGGGGCAGGACACC
CATTGGTGGCGATAATTGCGCTGCGGGGTGTTCACCAGGCAAGAGTGTTG
ATGGAAATAGAGGCAAAGAAGTCGCAGCGCAAATCGACCATTTTTCGGCC
GGTGCTCTCAGACAGGCCATTGCTCATTTACATGGGAAGGTCAGGGAGAG
GCATGTACTCGCCGCACGGTTTGAACTTCAGCAGCAGATTAGGCTTGAAG
CTCCTGATGGTGAACATCAATTAATGTAAACGGAAAGAAGAATGATTAAG
GATTTATTTTGTTCGCACAACGTATTGTAAATCAAGAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig2927:2667..7054+ >mRNA_H-paniculata_contig2927.7982.1 ID=mRNA_H-paniculata_contig2927.7982.1|Name=mRNA_H-paniculata_contig2927.7982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3516bp|location=Sequence derived from alignment at H-paniculata_contig2927:2667..7054+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGCAGCGACTAGGACCGTAGATAGGACCATCAACGTAGCAAGCTACGC TCACGGTGCTCGTATCGTGGAATTTTCGTCAGAGTGCCAAGGATGCGGTG CATCCAATGTGCTAGAGCCTAACCCGAGCAAGATGGCAGCGACTAGGACC GTAGATAGGACCATCAACGTAGCAAGCTACGCTCACGGTGCTCGTATCGT GGAATTTTCGTCAGAGTGCCAAGGATGCGGTGCATCCAATGTGCTAGAGC CTAACCCGAGCAAGGTTTGGTTGACGGATCCAGCTTCAACGCTGCCTCAG TATGTGGTCGTTCAGCTAAAACGGGAGCCTGGTGTGATGCTTCGGACATT GGGATGGTTCTGCTGGCACGCCTACTCCACTAATCCAGGTTTGGTTGACG GATCCAGCTTCAACGCTGCCTCAGTATGTGGTCGTTCAGCTAAAACGGGA GCCTGGTGTGATGCTTCGGACATTGGGATGGTTCTGCTGGCACGCCTACT CCACTAATCCAGCCCGAATAAACCTCAAGCTATCTCGAGATGGGTTGCTC TGGACGCGCTGGCACTCCATAGAAGTCGAGTGCAGGGCGGGGATCCAGCT GCACAAGATCCGACCGTTTTTTCCTAATGAAACCCCTTTCGTCAAGGTGG AAATTGTGCGGAGCTTTGGCGCCTGCCAATGCTACCTGAATCGCCTTTAC CTACACGAGGAGGAGGCCGCAGATCTGAAACGTTTCCTGGGCTGCCCTGG TTGCCGCGGAAACAACAATAAGGGAAAATACCAAAGAGCTTCAGCGGGTA ACAAGAGAAGCGCCGGTTATCCTTTAGGTGCTGGCACTGCAAGGGTCAGT TTCGGTCTCCCCGATTTGGATGTAGACGCCCATCAAGCTACGTCTTTTTC GTTGTCAGCGCGCCGAAGACGGGCGTCCACCAGGAATCGAGGCTATCAAA ATTTGGATCTTATAGGCGAGTCGCTGCCTACTGCTAGCCTTTACTCTAGC AGACGAAGCAACGGAGGCCGAATAGTCACCAGCTCGAATCTAGGCGAGGG CATGCAAAGCAACAGTGGGTCAGCGTACCAACAATCGACAGCAAAAAAAC GCGATTTTACTGCCGAACTCAAGGCGCTGGATCCGCTTATCCAATCTCCG ATCGTGGGATGCCTTTCCAAGAGGTCGCAACGATCCAGGATCGCCCCACG AATCTCGAAATTCCAGGTACCACGCGAGGAAGAGAATATGGACGCCTGCA ACATATTCGGGGACTGCGATGAAAGCGACAGAACAGGCGATAGGGGGGGT GCGTTGAGCGCTGTTGATTTGAGGACGTCGTACGAATCATCGGACACGAC TGCAGAAGAAGCGAAAGAGGGCGACCGCGCAGACAGTAATGAGGGCAGCG GGGATAGTCAGCTGACCAGATCATCTGCCGACCGACGAAAACTTGCTTCT TGGGCTGCAGGTGGTACCGTAGGAATAGGCGGTGGCCCCGGCGATATCGA GCGTATACAATGCCAGAATGTAGCCAAGTCCGCGGTCACTGCTGAGAGCA GCCCTCCAAGTCACTCTGATGTAGGCTCCCTAAACGTTTATGTGGATCTG GTGTCGGGCAGTATGAACAAGTCGTCTTCCGCAACGGCTTCGCCGATACC GGCAAATCAAGAAGCAGAGGTGGAAGGAAACAAAATACCGTCGGAGCAAC GTAATGAATATACCCCGGGTTCCGCAGCGTGGTTGTCGGAAAGAAAAAGC GGGCAGCTCGCTGCAGGTAGCAGGGGCAGGACACCCATTGGTGGCGATAA TTGCGCTGCGGGGTGTTCACCAGGCAAGAGTGTTGATGGAAATAGAGGCA AAGAAGTCGCAGCGCAAATCGACCATTTTTCGGCCGGTGCTCTCAGACAG GCCATTGCTCATTTACATGGGAAGGTCAGGGAGAGGCATGTACTCGCCGC ACGGTTTGAACTTCAGCAGCAGATTAGGCTTGAAGCTCCTGATGGTGAAC ATCAATTAATGTAACCCGAATAAACCTCAAGCTATCTCGAGATGGGTTGC TCTGGACGCGCTGGCACTCCATAGAAGTCGAGTGCAGGGCGGGGATCCAG CTGCACAAGATCCGACCGTTTTTTCCTAATGAAACCCCTTTCGTCAAGGT GGAAATTGTGCGGAGCTTTGGCGCCTGCCAATGCTACCTGAATCGCCTTT ACCTACACGAGGAGGAGGCCGCAGATCTGAAACGTTTCCTGGGCTGCCCT GGTTGCCGCGGAAACAACAATAAGGGAAAATACCAAAGAGCTTCAGCGGG TAACAAGAGAAGCGCCGGTTATCCTTTAGGTGCTGGCACTGCAAGGGTCA GTTTCGGTCTCCCCGATTTGGATGTAGACGCCCATCAAGCTACGTCTTTT TCGTTGTCAGCGCGCCGAAGACGGGCGTCCACCAGGAATCGAGGCTATCA AAATTTGGATCTTATAGGCGAGTCGCTGCCTACTGCTAGCCTTTACTCTA GCAGACGAAGCAACGGAGGCCGAATAGTCACCAGCTCGAATCTAGGCGAG GGCATGCAAAGCAACAGTGGGTCAGCGTACCAACAATCGACAGCAAAAAA ACGCGATTTTACTGCCGAACTCAAGGCGCTGGATCCGCTTATCCAATCTC CGATCGTGGGATGCCTTTCCAAGAGGTCGCAACGATCCAGGATCGCCCCA CGAATCTCGAAATTCCAGGTACCACGCGAGGAAGAGAATATGGACGCCTG CAACATATTCGGGGACTGCGATGAAAGCGACAGAACAGGCGATAGGGGGG GTGCGTTGAGCGCTGTTGATTTGAGGACGTCGTACGAATCATCGGACACG ACTGCAGAAGAAGCGAAAGAGGGCGACCGCGCAGACAGTAATGAGGGCAG CGGGGATAGTCAGCTGACCAGATCATCTGCCGACCGACGAAAACTTGCTT CTTGGGCTGCAGGTGGTACCGTAGGAATAGGCGGTGGCCCCGGCGATATC GAGCGTATACAATGCCAGAATGTAGCCAAGTCCGCGGTCACTGCTGAGAG CAGCCCTCCAAGTCACTCTGATGTAGGCTCCCTAAACGTTTATGTGGATC TGGTGTCGGGCAGTATGAACAAGTCGTCTTCCGCAACGGCTTCGCCGATA CCGGCAAATCAAGAAGCAGAGGTGGAAGGAAACAAAATACCGTCGGAGCA ACGTAATGAATATACCCCGGGTTCCGCAGCGTGGTTGTCGGAAAGAAAAA GCGGGCAGCTCGCTGCAGGTAGCAGGGGCAGGACACCCATTGGTGGCGAT AATTGCGCTGCGGGGTGTTCACCAGGCAAGAGTGTTGATGGAAATAGAGG CAAAGAAGTCGCAGCGCAAATCGACCATTTTTCGGCCGGTGCTCTCAGAC AGGCCATTGCTCATTTACATGGGAAGGTCAGGGAGAGGCATGTACTCGCC GCACGGTTTGAACTTCAGCAGCAGATTAGGCTTGAAGCTCCTGATGGTGA ACATCAATTAATGTAA back to top
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