prot_H-paniculata_contig292.7964.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig292.7964.1
Unique Nameprot_H-paniculata_contig292.7964.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
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BLAST of mRNA_H-paniculata_contig292.7964.1 vs. uniprot
Match: D7G015_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G015_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 6.690e-43
Identity = 84/159 (52.83%), Postives = 108/159 (67.92%), Query Frame = 0 
Query:   66 ALRICAGELEEDRSRARYTDVTVREAVEWTIGKDSEFSYVDVRSPEEHARPTTPRGCLSIPAFQPI---------GATNSLDDDEEKQEALDYEGLEWELLPDFVDKVKSQFSLDSKLLIGCKTSRSAIACQVLADAGFSEIYNVESQTFMKTRHP-VW 214
            A+R+  GE   +  +  YTDVTVREAVEWT+ +DSEFSY+D+RS EEH +  T RG L IPAF  +         G  +   DD     A ++E  ++ + PDFVD +K++F LD+KLLIGCKT RSA ACQ+L +AGF+EIYNVESQ FM+TR P VW
Sbjct:   55 AVRMLGGEDGGEEEKG-YTDVTVREAVEWTMSRDSEFSYIDIRSAEEHEKLATVRGALCIPAFDLVMPEAEEQGEGLDDQDGDDTGYAPAYNFEESDYTVKPDFVDTMKARFDLDAKLLIGCKTYRSAKACQLLVEAGFTEIYNVESQIFMRTRAPEVW 212
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BLAST of mRNA_H-paniculata_contig292.7964.1 vs. uniprot
Match: A0A836CME5_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.490e-20
Identity = 48/129 (37.21%), Postives = 75/129 (58.14%), Query Frame = 0 
Query:   83 YTDVTVREAVEWTIGKDSEFSYVDVRSPEEHARPTTPRGCLSIPAFQPIGATNSLDDDEEKQEALDYEGLEWELLPDFVDKVKSQFSLDSKLLIGCKT-SRSAIACQVLADAGFSEIYNVESQTFMKTR 210
            + D+TV +AV+W       F+Y+D+R  EEH     P+  +++PAF P G               + E +EW  +P F   V+++F  D+KLLIGC+  +RS +AC+ L  AGF  ++NVES ++M+TR
Sbjct:    9 FKDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAFTPDGD-------------FEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVESSSYMRTR 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig292.7964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G015_ECTSI6.690e-4352.83Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CME5_9STRA1.490e-2037.21Rhodanese domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 82..214
e-value: 2.2E-16
score: 61.9
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 82..202
NoneNo IPR availablePANTHERPTHR44542FAMILY NOT NAMEDcoord: 79..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..217
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.463
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 98..204
score: 8.552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig292contigH-paniculata_contig292:11596..16827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig292.7964.1mRNA_H-paniculata_contig292.7964.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig292 11534..18138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig292.7964.1 ID=prot_H-paniculata_contig292.7964.1|Name=mRNA_H-paniculata_contig292.7964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MHGSICRRALGVLFHVSVITEAYRIQIQPPSQVTILRFQHARLTSTRAHT
SARTRCKHDRTSKMGALRICAGELEEDRSRARYTDVTVREAVEWTIGKDS
EFSYVDVRSPEEHARPTTPRGCLSIPAFQPIGATNSLDDDEEKQEALDYE
GLEWELLPDFVDKVKSQFSLDSKLLIGCKTSRSAIACQVLADAGFSEIYN
VESQTFMKTRHPVWMDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036873Rhodanese-like_dom_sf
IPR001763Rhodanese-like_dom