mRNA_H-paniculata_contig292.7963.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: D7G013_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G013_ECTSI) HSP 1 Score: 160 bits (404), Expect = 8.390e-41 Identity = 82/143 (57.34%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 1264 MSGSGEAVRVLLEKE-AGLEATDDEGCTATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRACQALRVDSVKLLLQFGADEDARDGDGRTPAAVASKLLQTQEPGVYRNRLDEILNMLAKAPADRVWRRRGWLVMMR 1689
MSGSG AVR LL+++ + LEA D +G TA H+A+GHRLGS TL A + + N+EA T GETPLH+AC+ALRV +V+ LL+FGA++ A D +GRTPAA+ ++LL +Q PG++R+ L IL +L AP DRVWRRRGWL+M+R
Sbjct: 1 MSGSGAAVRFLLDRDISSLEARDHDGRTALHLASGHRLGSDETLRALVESNGNIEARTFLGETPLHKACKALRVSAVEQLLRFGANDAAVDAEGRTPAAMTARLLLSQRPGMFRDMLQNILTLLEAAPGDRVWRRRGWLLMLR 143
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: D7G014_ECTSI (Ankyrin domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G014_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.710e-30 Identity = 153/330 (46.36%), Postives = 179/330 (54.24%), Query Frame = 1
Query: 328 TARSSLLRGMGERLLALVFESAPRDQLSNWLRVPLEHAAARGDFGCVE-------------KLVSAGADVCVRRRTMVVTDRSPLVAACQGGSEEVVSILLRNGAGPNGEFRQRQQHHQQCNTDGCXXXXXXXXXXXXXRSSTSSWESRTTGSGHDWGVRGGSSGGSVYDDSCSDDDSSTRWSPLHCAASGGHVAAVKALVSAGGELDAVDDENCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMVRALLRA-------CPPGVINGNGGVHLLLSPLHRAALGGHSDVMRELLAHGASAATLSCGGRSILHA 1257
++ S+ LRG+GE LL +V+ESA +QL +WLRVPLEHAAA E KL+ AGAD VRR V DRSPL+AA Q G+ VVS LL NG+ P+GE + C WES S G V D S S T PLH AASGGHV+ V+AL+ AG +LD D + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MV+A+LR CP HL + PLHRAALGGH +VM ELL G+S TL+ R+ LHA
Sbjct: 10 SSSSNPLRGLGEELLTIVWESASSEQLGSWLRVPLEHAAAXXXXXXPEHRCNDDSSPALCLKLLEAGADAFVRRGP--VLDRSPLLAAAQAGNAAVVSALLDNGSAPDGE-------EEDC------------------------WESSIFSSSSSAITVG------VVDASSSYGGQRT---PLHFAASGGHVSMVRALIGAGADLDTADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVKAILRGSRESNLPCPTD--------HLEMPPLHRAALGGHCEVMSELLRQGSSLHTLAGNARTALHA 289
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 111 bits (278), Expect = 3.260e-22 Identity = 82/191 (42.93%), Postives = 106/191 (55.50%), Query Frame = 1
Query: 1144 SPLHRAALGGHSDVMRELLAHGASAA-TLSCGGRSILHACA-----MSGSGEAVRVLLEKEA--GLEATDDEGCTATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRACQALRVDSVKLLLQFGADEDARDGDGRTPAAVASKLLQTQEPGVYRNRLDE-ILNMLAKAPADRVWRRRGWLVMMR 1689
SPL AA GH+DV++ LL +S T + G + LH A + G+AVRVLL A ++ T+D T H+A + S T+ A L GAN+ A T +TPLH AC LR V+LLL++GADE + DG TPA V L Q R ++ I MLA+APADR WRRRGWLV+ R
Sbjct: 247 SPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSR 437
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 103 bits (256), Expect = 1.120e-20 Identity = 79/192 (41.15%), Postives = 103/192 (53.65%), Query Frame = 1
Query: 1144 SPLHRAALGGHSDVMRELLAHGASAATLSCG-GRSILHACAM-----SGSGEAVRVLLEKEAGL-EATDDEGC-TATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRACQALRVDSVKLLLQFGADEDARDGDGRTPAAVASKLLQTQEPGVYRNRLDE--ILNMLAKAPADRVWRRRGWLVMMR 1689
SPL AA GGH+DV++ LL +S + G G + LH A+ +G+AVRVLL A + E +++ C T HIA R S T+ A L G+N+ A +TPLH AC+ V V+LLL++GADE + G+TPA V Q D I ML APADR WRRRGWLV+ R
Sbjct: 85 SPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSR 276
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 8.260e-18 Identity = 143/470 (30.43%), Postives = 190/470 (40.43%), Query Frame = 1
Query: 307 MDRSRNPTARSSLLRGMGERLLALVFESAPRDQLSNWLRVPLEHAAARGDFGCVEKLVSAGADVCVRRRTMVVTDRSPLVAACQGGSEEVVSILLRNGAGPNGEFRQRQQHHQQCNTDGCXXXXXXXXXXXXXRSSTSSWESRTTGSGHDWGVRGGSSGGSVYDDSCSDDDSSTRWSPLHCAASGGHVAAVKALVSAGGELDAVDDENCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMVRALLRACPPGVINGNGGVHLLLSPLHRAALGGHSDVMRELLAHGASAATLSCGG--RSILHACAMSG----SGEAVRVLLEKEAGLEA--TDDEGCTATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRACQALRVDSVKLLLQFGADEDARDGDGRTPAAVASKLLQTQ-EPGVYRNRLDEILNMLAKAPADRVWRRRGWLVMMR 1689
M S+ S L G + LV A +Q WLR P EHAAA G+ +L+ AGA+ R R+ L AA G SE++V L GA TD + GG + D + + + SPLH AA GH V L+ L+ TA XXXXXXXXXXXX V+ LL A + NG SPL AA G +DV++ LL + + GG ++ +A ++ G +G+AVRVLL A + A T D T+ ++A R+ S T+ A L GAN+ A +TPLH AC V+LLL++GAD+ G+TPA V L Q + I MLA+ PA R WRRRGWLV+ R
Sbjct: 1 MPGSKREEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGC--NGRTLLGAAAFGRSEKMVRTTLTAGA-----------------TDDVNV------------------------------LFGGEREALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLL-----LNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHL--------------EAVQELLAAGANYSLRTNGS----RSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSR 398
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 9.110e-18 Identity = 139/529 (26.28%), Postives = 208/529 (39.32%), Query Frame = 1
Query: 334 RSSLLRGMGERLLALVFESAPRDQLSNWLRVPLEHAAARGDFGCVEKLVSAGADVCVRRRTMVVTDRSPLVAACQGGSEEVVSILLRNGAGPNGEFRQRQQHHQQCNTDGCXXXXXXXXXXXXXRSSTSSWESRTTGSGHDWGVRGGSSGGSVYD-----DSCSDDDSSTRWSPLHCAASGGHVAAVKALV-SAGGELDAVDDENCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMVRALLRACPPGVINGNGGVHLLLSPLHRAALGGHSDVMRELLAHGASAATLSCGGRSILHACAMSGSGEAVRVLLEKEAGLEATDDEGCTATHIAAGHRLGSVATLD-------AFLLAGANMEATTNNGETPLHRACQALR--VDS-VKLLLQFGADEDARDGDGRTPAAVASKLLQ-------------TQEPGVYRNRLDEILN-------MLAKAPADRVWRRRGWLVMMRVQHQRRESCFAAIASASAAPPDGRRKQRRHAPKGVLVNLPR 1812
+ +LL G + L++ A +Q + WLR PLEHAAARG+ G VE+L++AGA+ R R+ L AA GG+ +VV+ LL +G + + + + + V G G + D +C + + + +PLH AA+ G+ V L+ +A ++DA+D + + V ALLRA + GG HL ++ + A GH V+ ++ +G + G + LH +AV VLL+ A + A + C A H G SV +D A L G N+ T G + LH C +L +D V LLL++GA E A + +G TP+ + T+ G R D + +LA+APADR WRRR WLVM+R + +R AP G R A G NLPR
Sbjct: 6 KRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGC--RGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRH--GDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHC---------------------------------STVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHAR---GAQAVDVLLDAGADVNA---KACPALH---GFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAER----------GRGAPSSGSGSDRTEAATGR--NLPR 476
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.580e-17 Identity = 69/175 (39.43%), Postives = 86/175 (49.14%), Query Frame = 1
Query: 1234 GGRSILHACAMS------GSGEAVRVLLEKEAGLEA--TDDEGC-TATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRACQALRVDSVKLLLQFGADEDARDGDGRTPAAVASKLLQ------TQEPGVYRNRLDE--------ILNMLAKAPADRVWRRRGWLVMMR 1689
GG + LH C +G+ VRVLLE A ++A T D C T H A R+ + + A L GAN+ A +TPLH AC V+ V+ LL +GADE D DG TPA + T PG R + DE I MLA+APADR W RR WLV+ R
Sbjct: 18 GGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGK-DEAIEADQHRIRQMLARAPADRSWHRRRWLVLSR 191
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 2.750e-17 Identity = 126/469 (26.87%), Postives = 168/469 (35.82%), Query Frame = 1
Query: 334 RSSLLRGMGERLLALVFESAPRDQLSNWLRVPLEHAAARGDFGCVEKLVSAGADVCVRRRTMVVTDRSPLVAACQGGSEEVVSILLRNGAGPNGEFRQRQQHHQQCNTDGCXXXXXXXXXXXXXRSSTSSWESRTTGSGHDWGVRGGSSGGSVYDDSCSDDDSSTRWSPLHCAASGGHVAAVKALVSAGGELDAVDD-ENCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMVRALLRACPPGVINGNGGVHLLLSPLHRAALGGHSDVMRELLAHGASAATLSC--GGRSILHACAMSGSGEAVRVLLEKEAGLEATDDEGCTATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRAC----QALRVDSVKLLLQFGADEDARDGDGRTP--------AAVASKLLQTQEPGVYRNRLDEILNMLAKAPADRVWRRRGWLVMMRVQ 1695
+ +LL G + L+ A +Q ++WLR PLEHAAARG+ G VE+L+ AGAD R R+ L AA +G P+ SV S++ S LH A GH AA + L+ AG + VD + C +V LL + + +H SPL A+ GH + LL GA TL C GG S + A M+G GE V V G H +A H G T+ A L N + N G + LH AC +V LLL++GA E A D G TP AAVAS + + + + L +LA+APADR WRRR WLVM+R +
Sbjct: 6 KRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADG--RAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVV------------------------------------------------------SV----------SSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLH---SPLMLASANGHRSTVEALLRAGADT-TLRCYSGGVSDMAALEMAG-GEVVDVXXXXXXXXXXXXAGGSIPLHASAVH--GHDETMVALLKREGNFDEQDNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVASSNVTPRNSEKMQREMQRALVLLARAPADRAWRRRCWLVMLRAR 401
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 1.270e-16 Identity = 67/184 (36.41%), Postives = 94/184 (51.09%), Query Frame = 1
Query: 1171 GHSDVMRELLAHGASAATLSC--GGRSILHACAMSGSGEAVRVLLEK--EAGLEATDDEGCTATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRACQALR---VDSVKLLLQFGADEDARDGDGRTPAAVASKLLQTQEPGVYRNRLDEILNMLAKAPADRVWRRRGWLVMMRVQHQ 1701
GH V++ L HG A++ +C G + LH A+ EAV VLLE +A +E+ C T + A S L L GA+ +NG PLH A ++ V LLL++GA E A + G TPA V +L P R ++ +LA+APADR WRRRGW+VM+R + +
Sbjct: 178 GHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLA-IHRPDATEERAGALV-LLARAPADRAWRRRGWVVMLRARSE 359
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 1.150e-15 Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 1
Query: 1276 GEAVRVLLEK--EAGLEATDDEGCTATHIAAGHRLGSVATLDAFLLAGANMEATTNNGETPLHRACQALRVDSVKLLLQFGADEDARDGDGRTPAAVASKL----LQTQEPGVYRNRLDEILNMLAKAPADRVWRRRGWLVMMR 1689
G+AVRVLL + + T D T H+A R+ S T+ A LL GA++++ + +TPLH AC+ V V+LLL++GADE + G PA V L +E R I ML +APADR WRRRGWLV+ R
Sbjct: 60 GDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRA-LLEGADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQR---ICRMLTRAPADRSWRRRGWLVLSR 199 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig292.7963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig292.7963.1 >prot_H-paniculata_contig292.7963.1 ID=prot_H-paniculata_contig292.7963.1|Name=mRNA_H-paniculata_contig292.7963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=568bp MDRSRNPTARSSLLRGMGERLLALVFESAPRDQLSNWLRVPLEHAAARGDback to top mRNA from alignment at H-paniculata_contig292:7546..10707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig292.7963.1 ID=mRNA_H-paniculata_contig292.7963.1|Name=mRNA_H-paniculata_contig292.7963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3162bp|location=Sequence derived from alignment at H-paniculata_contig292:7546..10707- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig292:7546..10707- >mRNA_H-paniculata_contig292.7963.1 ID=mRNA_H-paniculata_contig292.7963.1|Name=mRNA_H-paniculata_contig292.7963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3408bp|location=Sequence derived from alignment at H-paniculata_contig292:7546..10707- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |