mRNA_H-paniculata_contig2919.7962.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2919.7962.1 vs. uniprot
Match: D8LUA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA4_ECTSI) HSP 1 Score: 252 bits (643), Expect = 6.140e-72 Identity = 205/505 (40.59%), Postives = 261/505 (51.68%), Query Frame = 3
Query: 3 MARDEGENYGSEIKAEMMRAFQGLEELVKEGRAAMAEERSRQEEIQASNLRELEASLADLQKQYCREVDKRVRAEEAKADEEERLFAALEKRTCLERDYSQLLARQQGGLHQEGIAVQELSHHSPDFQKLRREVWANQKTGSGRQVEWMNVLRACRLYNRRLCEDFLASAGESSPTIRLYLCLRCAGSEAEEVCRVGLSSLARAAVVLWPDPKQATTQAQARTGTPPTGRGPAAXXXXXXXXXTRTTQARSTKKSVSADPMDAADNAGTFGGRGDGTVIMQLAVVLLEEEVDSVEIGGRTEGMSAAVVAGGATAGRRSRCRETDRVARGRDEEGLHLLLPRLVDRAGVSGRVLRVMMPLASPPQQELAPAPATPVERDDDGNGKSRSHCFVLPARCFVRALPEFHLLCASGSTGENRRALEDALAELSTDAGIGAAPGTDLLSQLELKMQAEVAAYLERMQQEVTVDEASKLRATDADIRRKAANLASVRGSVETERALQEALLR 1517
MAR G GSE KAEMMRA + LE LVKEGRAA++ E+SRQE+ EKRT LERDY+QL+A+QQ + Q G+A+QELS HSPDFQ+LR EV NQ+T SGR +E MNVLRACRLYNRRLCE FLAS G+SSPT+RLY+ V + + + AV+L PD Q T AQ R XXXXXXXXX R R + + G TV +L V+ VE GR + R+V +A G R P +S + A A A D G K S+ F+ P RCF ALPEFH+LCASG+ GE++R+L+ AL++L D +G AP DLL Q+E KM+ +V AYL+RMQ++VT EAS+L+AT ++R KAAN+AS+R + +RALQEA+LR
Sbjct: 213 MARHGGVERGSEAKAEMMRALKALEGLVKEGRAAISREQSRQEK---------------------------------------------EKRTRLERDYAQLVAQQQSRVVQ-GVAIQELSDHSPDFQRLRMEVLENQRTQSGR-MELMNVLRACRLYNRRLCEGFLASGGKSSPTVRLYI-------------SVSGAVILQLAVILPPDQAQIDTNAQERPXX-------XXXXXXXXXXXARGPNRRIGVQKGXXXXXXXXXXXASLARVGGATVPAEL--------VERVEASGR---------------------------------------VTRVVGQAPAGGGAGRESSPTSSSTPERNAFADAGGEAEDSGGAAKGASY-FIFPERCFPLALPEFHVLCASGAVGEDKRSLDGALSKLGADNLLGPAPAADLLLQVENKMEEQVKAYLKRMQEDVTPAEASRLQATHGNLRWKAANVASLRADADEQRALQEAILR 602
BLAST of mRNA_H-paniculata_contig2919.7962.1 vs. uniprot
Match: A0A7S1XP50_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP50_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 6.030e-13 Identity = 138/543 (25.41%), Postives = 213/543 (39.23%), Query Frame = 3
Query: 24 NYGSEIKAEMMRAFQGLEELVKEGRAAMAEERSRQEEIQASNLRELEASLADLQKQYCREVDKRVRAEEAKADEEERLFAALEKRTCLERDYSQLLA------RQQGGLHQEGIAVQELSHHSPDFQKLRREVWANQKTGSGRQVEW---MN-----------------VLRACRLYNRRLCEDFLAS---AGESSPTIRLYLCLRCAGS-------EAEEVCRVGLSSLARAAVVLWPDPKQATTQAQARTGTPPTGRGPAAXXXXXXXXXTRTTQARSTKKS----------VSADPMDAADNAGTFGGRGDGTVIMQLAVVLLEEEVDSVEIGGRTEGMSAAVVAGGATAGRRSRCRETDRVARGRDEEGLHLLLPRLVDRAGVSGRVLRVMMPLASPPQQELAPAPATPVERDDDGNGKSRSHCFVLPARCFVRALPEFHLLCASGSTGENRRALEDALAELSTDAGIGAAPGTDLLSQLELKMQAEVAAYLERMQQEVTVDEASKLRATDADIRRKAANLASVRGSVETERALQEALL 1514
N+ + EM + F L++LV EGRAA+A E RQ ++ NL+ LEA L LQK Y +E+DKRV AE A EEE+L A G G+ Q L H+P++Q + R + K G + +N VLR R+++ L F AS AG S+ + L L G EA + +G + V+L DP+ A +A XXXXXXXXX ++ +P A +A G + + +M + +EV ++ G A + GG +EE D A +G G K S+ +++ R + LPE+H+L S G ++R LE AL S A G DL+++LE + ++ Y+ER+ +E A +LR D ++R + +A++RG +++ER+ QE +L
Sbjct: 268 NHADAFREEMFQTFAQLQQLVLEGRAAVASEHERQARVREENLKHLEAELLGLQKVYNKEIDKRVEAEARAAAEEEKLLKAAXXXXXXXXXXXXXXXXXXXXXEAAGDADGGGVIAQHLGEHTPEYQHVVRHFRSAGKAGEAARASLSLVLNPNADSGARPVSAAAKAAVLRCYRVHSNALVHGFEASNGGAGNSAERVYLAADLGTTGKILSRGIGEALQDPSLGYGT---GRVMLHADPELALLLYEAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAMLVCRLNPNPEALAFSASAPGSQEEAAQLMAQ----VPQEVPFAKVKFAAAGDGGAWLDGG-------------------EEE----------DEAAENG----------------------------GKGVDKGGSYAWMVGGRGYAAVLPEYHVLVGRSSFGGDKRKLEAALESFSLPVA-WEADGGDLVARLEAEAGEKIRGYMERVWEETNPATADRLREVDENMRGRVDAVAALRGQIQSERSAQEDVL 745 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2919.7962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2919.7962.1 >prot_H-paniculata_contig2919.7962.1 ID=prot_H-paniculata_contig2919.7962.1|Name=mRNA_H-paniculata_contig2919.7962.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=511bp MARDEGENYGSEIKAEMMRAFQGLEELVKEGRAAMAEERSRQEEIQASNLback to top mRNA from alignment at H-paniculata_contig2919:521..18830+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2919.7962.1 ID=mRNA_H-paniculata_contig2919.7962.1|Name=mRNA_H-paniculata_contig2919.7962.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18310bp|location=Sequence derived from alignment at H-paniculata_contig2919:521..18830+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2919:521..18830+ >mRNA_H-paniculata_contig2919.7962.1 ID=mRNA_H-paniculata_contig2919.7962.1|Name=mRNA_H-paniculata_contig2919.7962.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3066bp|location=Sequence derived from alignment at H-paniculata_contig2919:521..18830+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |