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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 885 |
| Cds size | 816 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2918.7959.1 >prot_H-paniculata_contig2918.7959.1 ID=prot_H-paniculata_contig2918.7959.1|Name=mRNA_H-paniculata_contig2918.7959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp
MGPLSPFGHLPPDMSFGPLNPGSPPGLAYHLPQFPPTPAGPPQQQQQQQQ
QQPQPPPPPPPPQQQQQKPATTAAVAEGTSGASDPSSNVGNCGGGASAGQ
TPSPKGAAVGMDTSGAEGAFGFEGAARREGAAGAVATAGGENSGSEAGGR
VLDGMEVVGHQGIGDGASSMPGSTIPQTPSFTSLGFPIMGMNNSSSSNGG
ALSESTAGMEHHSQAKSQGAVLNGIMQISGVPSSMYAHHSAGATTPAAAG
VGSISAAEISSMPNAGASGQQ* back to topmRNA from alignment at H-paniculata_contig2918:14194..18314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2918.7959.1 ID=mRNA_H-paniculata_contig2918.7959.1|Name=mRNA_H-paniculata_contig2918.7959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4121bp|location=Sequence derived from alignment at H-paniculata_contig2918:14194..18314+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCCCGCAGCCCGGACGGCAATTCATGGGACCCCTGTCACCGTTCGGAC
ATTTGCCGCCAGATATGTCGTTCGGCCCACTTAACCCCGGGTCGCCGCCG
GGACTCGCATACCATTTGCCGCAGTTTCCACCTACACCCGCCGGGCCGCC
GCAGCAACAGCAACAGCAACAACAACAACAGCCACAGCCACCGCCGCCGC
CGCCGCCGCCGCAGCAGCAGCAGCAGAAGCCGGCGACGACAGCGGCGGTA
GCAGAAGGGACCAGTGGCGCTTCCGATCCGAGCTCGAACGTTGGGAATTG
TGGTGGTGGTGCGAGTGCTGGACAAACACCATCCCCGAAGGGTGCTGCGG
TTGGTATGGATACGTCAGGCGCTGAAGGGGCATTTGGGTTTGAAGGGGCA
GCGCGGAGGGAGGGAGCGGCGGGTGCGGTGGCAACGGCGGGTGGGGAAAA
TAGTGGTTCCGAAGCCGGGGGACGGGTCTTGGATGGCATGGAAGTGGTGG
GCCACCAGGTGTGTGTGTGTTACGCTAGGCCGTCAACCGTTAGCGTTCGA
AGACTAAGGTTTGGTCGATCAGCCGTATCAGACAGAGATGGTTAATTATT
TTTGGTGCAGATCTTCCTTGAATAGCATCCAATTTCGTCCAAGCAAGTAT
ATATTATAGTGGTGGTGATGGTGGCAGTCTTCCTCGTTGTGGTGTATATA
GTATATAGTACATGGTAAGGAGTGAGCTGATTTTTGCTTAAGCGAGGGCA
TAGTTGATGTGCGTCCACGCACCAGTATGAGCTTTCCCATTGAAGCATCT
CCTTTGTTTTGCTATTGGGAATTTTGGGAAGACAGACCTCCACGCATTCT
ATGTTTTGCGCCCGACCCCGGAGCAATGGCTCACTGCGCTCGCATTAATA
TTCGTTCTTCATAAATGACTTGACTACAGAATTGAATGTCCACGACTATC
TACCTCACTAATGTCTACAGTGAGGATGTTATTTATTATGATTTTTTTCT
TGATTTGGCTCACGTTGCCCACAACGACGGCCATGATGGATGATAACAGC
TGGACCCGGGGCAGCGTAAGATGCTTATGGATGACGGAAAGGGGAAGCTG
TCCGGGCAAGAGCTCGTAACGCTTCCTGCACCGGTACGTTTCATAATATA
CTTCATTTTAATTTTGCAGTTTTTTTGTCAGCTGTGCGTTAAATTTACTT
TCATTAATAATAATAATAATAATAATAATAACTCTCCTTCTTCTGAGTAG
TAGTAATATGGTTTCTATTTGTGTGTTGTCATTACTACTTTTTTCTTACT
TGCGTTTATTATTTTCTAGTATATATACATATATACACATATTGTTCGGT
TTTGAGTCGGTCAAGAAATTTAAAGCCAGCATAAATTGGCTAGACGGACG
GGGACAGATAAAGCAGAAGCTACAACCAACGACATCGAAAGGTAAAAATA
TAGCGACCTTTTGTCTGTCTCTGTCTCTGTCTCTGTCTTTCTCACATACA
CACACACATACACACACACACACACACATACACACACACACACACACACA
CAGCATGTCATTTCTGCCATCCTTCGAAGTTCTCAACATCTAATATAACA
CCTGTACATTGCCGTCCTGGCGTGCGGGATAGGGGATAGAAACACAACTT
CCCTCCGAAGAAACACCAATGCTTCTATTATGTAACGGGACACCGACGTG
AATAAAGAATATCTTCGTCGGATCAGATTCGTCCGCCGCTGCCGCTGCCG
CCGCCGCCGCCGCTGCAGGGAATTGGAGATGGAGCGTCGTCAATGCCTGG
CAGCACAATACCCCAGACACCTTCCTTCACTTCTCTGGGCTTTCCTATCA
TGGGCATGAATAATAGCAGCAGCAGTAATGGCGGCGCGTTATCAGAGTCG
ACGGCGGGTATGGAACATCATTCGCAGGCGAAATCGCAAGGCGCCGTCCT
CAACGGCATTATGCAGGTATTTATGCCAAAGTGGTTCGCAGTTGGTCATG
TGATAATTTTGCCTGGTTCGCGGTCGTTCATGTGAGAAATTGCCGGTTGT
GCGAATTGTCGTGGTATTTAGGGCCGTTCTACATGTTGGTCTTTTTCTCT
GTTTTCTTCTGTTTCCCTGTTTTTTTGGGTTTTTTTATAACGTCGAATTT
TTCGAAATAAAAAACAATGAACACGTGATATTTTTGCATTGCTGTGTTCC
TTAACCCTCTTCGAAGTCTGTTGATATTGTCGAGAGCGAAAGCGAAAAAA
GAAGAGGAAAGAGAGAGAAAAAACAAAATACCCACGTTTTTTATAACGTC
CCGTGACGTGAAGCATGCTTTCCTTCGATGGGTTGATCGTGTCAAATGGT
TACGCCCGATTACGCGCCTGACGACGCGTGTTTCTTCGTTTTCTGGTTGT
ACGCACAGGCCGTTAGAATTATACTTGAATATATATGTATATATATATAA
TATGTGAAATTGTAGTTCTAACTTTTCATGGGGAACCGGTACCATGGGGC
AGTGGGAATACGGAGTATTATTAAATACGGTGTGCTGTGATGAAAGTATT
ATCAAGTACTGCGAAAAAAATGCTGTGATGACTCACTCTGGATATATGGG
GTCATGATGGTGGACGCCGTGCTTGGGGGAGGCCTGTTGATACGACAAGT
ACAATGGTAATAGTATGTGTAGCTGTAACTTGGAGCTACAGGCAACACCA
TATGCTTTGCTCTCATGTGTTCGCCAAGCGAGTACATTATCGATTGGCGC
AGGTGGAACACAGCCATGTGATCGCTTAATATGATACGTAGAGTAGAGCA
CAGACAATGGGCATGACCAAAGAATCAATTGTACTCTACTGTAGTACCGT
GATTCCGCAAGAACTTTCGAAACACATCCAGCAATCGAATACCGTTGATG
GATCGTTTTTGTAATCATTTATACTGGACATGTATGTATGTATGTTTGTG
TGTTTTCATGTCTAGAGACATGTATCCCCCCCTAAATGCTGGCTCTAGCG
GCCAACATGGCGCTTTCCCCACCCCCTCGTCATCCGAGCTGCTTTATTTT
GGTAGTAATGGTTTCGGTTTGTGTCTTTGAAAATGTGCAAGGGCGCTGTG
ACTGTCTACTGAATCGAAAACGTGTGGTGTATTTTCCGGCCGTTTTATTT
GGTTGTCTTTTTTTTTTTTTTTTTTTTTCATGTTGAGCTGTTTTTATTTA
TTTCTTTTATCGATGCATTTCAGGCAATACACGAGCGTTTTTATTCGCGT
GACTTATGGTGTAAACCAGTTTGCCGGTTGTGACGTGAGATCTTTGTTCT
TATTGTGTGAACCGGTTCGTGGATGGTAAGATTTTTTTTCCCGGTTCGCG
GTTCGTGTCATCTGAGAAATAAATTGCGGGTCACGTGAAGAAAGCTTTGA
GGTTTGTTGCAGGCTACAGCTGCACCAAACGGCGCGTGACACTTGGTGAA
AAAATGGTTGAGTTGAGAAGTAGAAACTTTTCGAGGAAAAATGTCATCAT
CATCGTCATCATCATCATCGTTGTCATTATCCATCATCGTAATGACAATT
TTAATTAATCTATTTTCGGGGCGCAAAATAAGCGGGAATCAATAGATGCT
CTTCTCAGACAGGACGACAGATGGTTTCCTCGTCTGTACTGACAATCGTC
TCTCTATTGCTATTTTTTCAGCGTATTTTATGTCTATTTGTGTGGAAAAC
ATGCCCATAAAGCAGATCCCAGAGAGGCCAACAGGTATCGAGAAAAGCTT
GTTTGGCATGAGCCTTCGCCGATGTAGTGTTTCTGTTGTGTCCATGATCA
AAATGTTTTACAGTATGTTAAAGCCCCCGAAGGATTCATAAGCGTAAAAA
CTAGCTCCAATGCAAGGATTTCGGTTTGAGAACCCAAGCTACCCCCTGCC
TCTCTCCCCCCCTCTTTTCCACCCTCCCCCCGTCCTGTCCAGATATCTGG
CGTTCCTTCTTCCATGTACGCCCATCACAGTGCTGGAGCAACTACGCCCG
CGGCAGCCGGCGTTGGCTCAATTTCCGCGGCAGAAATTTCTTCGATGCCA
AATGCTGGGGCCAGTGGCCAGCAATGATATTTACGTTGTTTGGACTTTTT
CGTGTATGTTTTTCGCCGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2918:14194..18314+ >mRNA_H-paniculata_contig2918.7959.1 ID=mRNA_H-paniculata_contig2918.7959.1|Name=mRNA_H-paniculata_contig2918.7959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig2918:14194..18314+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACCCCTGTCACCGTTCGGACATTTGCCGCCAGATATGTCGTTCGG
CCCACTTAACCCCGGGTCGCCGCCGGGACTCGCATACCATTTGCCGCAGT
TTCCACCTACACCCGCCGGGCCGCCGCAGCAACAGCAACAGCAACAACAA
CAACAGCCACAGCCACCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCA
GAAGCCGGCGACGACAGCGGCGGTAGCAGAAGGGACCAGTGGCGCTTCCG
ATCCGAGCTCGAACGTTGGGAATTGTGGTGGTGGTGCGAGTGCTGGACAA
ACACCATCCCCGAAGGGTGCTGCGGTTGGTATGGATACGTCAGGCGCTGA
AGGGGCATTTGGGTTTGAAGGGGCAGCGCGGAGGGAGGGAGCGGCGGGTG
CGGTGGCAACGGCGGGTGGGGAAAATAGTGGTTCCGAAGCCGGGGGACGG
GTCTTGGATGGCATGGAAGTGGTGGGCCACCAGATGGGACCCCTGTCACC
GTTCGGACATTTGCCGCCAGATATGTCGTTCGGCCCACTTAACCCCGGGT
CGCCGCCGGGACTCGCATACCATTTGCCGCAGTTTCCACCTACACCCGCC
GGGCCGCCGCAGCAACAGCAACAGCAACAACAACAACAGCCACAGCCACC
GCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGAAGCCGGCGACGACAG
CGGCGGTAGCAGAAGGGACCAGTGGCGCTTCCGATCCGAGCTCGAACGTT
GGGAATTGTGGTGGTGGTGCGAGTGCTGGACAAACACCATCCCCGAAGGG
TGCTGCGGTTGGTATGGATACGTCAGGCGCTGAAGGGGCATTTGGGTTTG
AAGGGGCAGCGCGGAGGGAGGGAGCGGCGGGTGCGGTGGCAACGGCGGGT
GGGGAAAATAGTGGTTCCGAAGCCGGGGGACGGGTCTTGGATGGCATGGA
AGTGGTGGGCCACCAGGGAATTGGAGATGGAGCGTCGTCAATGCCTGGCA
GCACAATACCCCAGACACCTTCCTTCACTTCTCTGGGCTTTCCTATCATG
GGCATGAATAATAGCAGCAGCAGTAATGGCGGCGCGTTATCAGAGTCGAC
GGCGGGTATGGAACATCATTCGCAGGCGAAATCGCAAGGCGCCGTCCTCA
ACGGCATTATGCAGGGAATTGGAGATGGAGCGTCGTCAATGCCTGGCAGC
ACAATACCCCAGACACCTTCCTTCACTTCTCTGGGCTTTCCTATCATGGG
CATGAATAATAGCAGCAGCAGTAATGGCGGCGCGTTATCAGAGTCGACGG
CGGGTATGGAACATCATTCGCAGGCGAAATCGCAAGGCGCCGTCCTCAAC
GGCATTATGCAGATATCTGGCGTTCCTTCTTCCATGTACGCCCATCACAG
TGCTGGAGCAACTACGCCCGCGGCAGCCGGCGTTGGCTCAATTTCCGCGG
CAGAAATTTCTTCGATGCCAAATGCTGGGGCCAGTGGCCAGCAATGAATA
TCTGGCGTTCCTTCTTCCATGTACGCCCATCACAGTGCTGGAGCAACTAC
GCCCGCGGCAGCCGGCGTTGGCTCAATTTCCGCGGCAGAAATTTCTTCGA
TGCCAAATGCTGGGGCCAGTGGCCAGCAATGA back to top
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