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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1287 |
| Cds size | 1284 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2918.7958.1 >prot_H-paniculata_contig2918.7958.1 ID=prot_H-paniculata_contig2918.7958.1|Name=mRNA_H-paniculata_contig2918.7958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=428bp
PQQKPKRATADEASGPDVGVSASAPGEAAGPTAPAQDAAARAPGAAGGSG
GGGGGGGLPMNYPYPIAYHPTPGSFAVAPSCAGPSPYAFVDPYAFQQGPP
PPPGSPHYAHFPSYGGFKGYAFRTPFSNPMSPGAAGQRGPQSGVKDGAGS
GPGVSSSVGNGGIGLTLNMSLDVDGSARGEEGKEHSALGSGGGLLKLSMD
EDGLREMRDNMAAAAKIVKQHHAGAVEGVVQQPQQQNGGSSSTPHKRPAS
DPPAGQPPAKTSHPPHTVGNSAATPAAAAAAAAAAAALAAADAVAALGSV
LGNGQSPPMPQGGEAGAAGPAISQGPTGPRMPSAMVGSGGSGGSGGRDSS
SVLVGINGGAARGPAAAAMGSMGFSAAHHPFGFGLTQHVPPFSFPPPPPP
HFSQITGSAGGTGGAGGGSGGNSGAGGG back to topmRNA from alignment at H-paniculata_contig2918:8999..14096+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2918.7958.1 ID=mRNA_H-paniculata_contig2918.7958.1|Name=mRNA_H-paniculata_contig2918.7958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5098bp|location=Sequence derived from alignment at H-paniculata_contig2918:8999..14096+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCACAGCAAAAGCCAAAGAGAGCTACAGCCGATGAAGCATCAGGCCCAGA
CGTGGGCGTGTCTGCAAGCGCGCCGGGAGAAGCCGCTGGTCCCACCGCTC
CCGCGCAGGACGCCGCGGCTCGGGCACCAGGCGCGGCGGGTGGTAGCGGC
GGTGGTGGTGGCGGTGGCGGGTTGCCTATGAACTATCCTTACCCGATTGC
CTACCACCCCACGCCGGGAAGCTTTGCTGTCGCGCCGTCGTGCGCCGGAC
CGTCTCCGTACGCATTTGTTGATCCCTATGCTTTCCAACAGGTGATAATG
GCTTGCCAGAGTGTTCGTTGACGAGGTAGGGCGGGGAGGGGGTACGTGAT
TTGCGCGGTGGGGAAGGATACGAGGTAGTGTTGAGCATATCACTCGTATG
TGTATGGCTTTTTAGAGTAGTAGTTATAAGGCAGATGATGGAGATCCCAG
AACCCAAGCGAAGATGATTATGGGTATCAACGCCTTGAAAAATATACCAG
TAGTTCACAGCATAAGTGTAATGTACCTTGAGTCGTGAAAACATGGTTTA
GGTTTGCTGTCCGCATGATTGTGTGAAGGACAAGAGGGTTGAGCCCATTG
TGTTTTTTTGCTCGCCACAGGGTCCACCGCCACCCCCTGGTTCTCCACAC
TACGCTCACTTCCCCAGCTACGGTGGCTTCAAGGGCTACGCGTTCAGGAC
GCCATTTTCTAACCCTATGTCGCCTGGCGCCGCTGGTCAAAGAGGGCCGC
AGGTGAGAGTGAAGTTACGCTAGTGTCTGTTGTGGTGACGAGGGCGTCAT
CATTTTCTTTACTGTTTTTTTTTGTTTTTTTCTATGGGGTTCTCGCTCAA
TAGTTTCTGGCTGATAATTGACAGTATACCCTTGTTAATACGGTAAGGTG
GTGGTCGCGGTCATGATACTAGTTGTTTTAGAACATTTTTCCAAGTCTGC
AATCAAGTAACTTGAGAAAAAAGAATCTTGATGCGAGCGCAGCGAGCCGT
GGTGCATGGGTGGGTGGAGGACAAGGCCGGAACAATTTTTCAATTTCTGT
AGTCGAGTAATTTTTGAAGAGGGAATCTTGACACGACTGCACCGGACCGT
TGTTGGTGAGTGGGTGCAAGACAAATTTGTAACAATTATTTCAACTCTGT
ACTCGAGTAACTTTTGAAGAAGGAATATTGATGCGAGAGTAGTGAGTCGT
TGCGCTGGCGTCGAGGAAGATCACAGGAGTATGGCATACTTGCACCCGTG
GCTCTACTATTACTACTACTACTACCATCTATCGAATGGGCTGTACATAG
CTGTTGATTACATGATAGATTCGCGTGAACATCTACACTTTGAACCACAG
ATGCGCAGGGTGCAACCTGACACGTAAAAATCAAGGGTATCAAACGCGAT
TTGTAGAACATTGGAATAGTATTATATATATATATATTTATTCTATTTAT
CGGCTAAAGCACGATACTGCGAGGTGGGATCTCCCCCCCCGCCCCTATTG
TAGCTCTACCTGACGGGATCATTTTTTGGATCTTTGTACAGACTAATAGG
GAAATCATCTACACCAGATGATACATAGCTAGATTAGGAATCGAATCTAA
GGGGAAAAGCCGTGAAAAAAGGATATGGACTGTAAAAACGAAGCAAGTCA
TGCCTCAGCAAAAGTGAGTTTTAACCCGTAACGCGCCACTTGGTCATCGT
CTATTAGTTGTGGTTCTTCCTCAGGGTTGAAGGGCTTATATACTTGATCA
ATAAATACACTTACGCATGGTTTTTGTAAACATGAATATATATATATATA
TATATATGTGTGTGTGTATGTATTTTTGATGATATGTAGATATTCTTGAT
TATTCCAAATGTACAGGAATGCGATGTCTGTTTGCAATAAAAGGCCCGCT
AGAAGCTTGAAGTTTAGCTTTCCACCAGTAGCACGTCTTGCTGATGAAAA
AAATGTGATATGTCCGCTGCTGCTTCTGCTGTTGCTGTTGCTGTTGCTGT
TGCTTCTCGCTGTTGACATAACAGTCGGGGGTAAAAGACGGAGCTGGTAG
CGGCCCCGGGGTCAGCAGTAGCGTCGGCAACGGGGGCATCGGTCTTACCC
TGAATATGTCTCTGGACGTGGATGGCAGTGCACGGGGGGAAGAGGGGAAG
GAACACTCCGCGCTTGGGAGCGGAGGTGCGTCAGTTTTCGTGTAATGGTT
TTTGTGGATGTTAACTCCGTGGTCAAGGGTTATCTGTTATCTAGTTGTGG
TCATCGCACAGGAGAGGGATTTATAAAAATGACAAAATACACACATATAC
ACACACACATCCACAAGAGAAAAAAATGTACTTGAATATATCATTGACCA
CTACTACTACTACAGTAGGTACTTGCGTAATCTCGCCTCTCTTCTTTTTT
TAAGGATATATATTTTACCTACTGCAGGAGGGAGCTAATCGTGTACAGGT
CGCTCGAGGTTTTTTTTTCTTTTCGGTCCCCAGGAGACCAGGAAGGAACC
CCTGCCATGCACTTATACATTGTTGCTTTCGTGCGGCGCTTTGCCAGTTT
CCCGGTGCGCCCTGCTTTCGCCTTATCTCGATCCCTGCCTGGGATGTCAT
CACAACGTTTCCGCGGACGGGTAGGCACCTAGGCAAGCTCCACTCGGTTT
GACTCCCTTGATTTTTACGCGTCAGGTTGAGACCCAGATAGTCTCGGAGT
CAATCCGAGTAAACCTCCTGTAAACACTCCCAGTTTGACTCTGTACACGA
GTCACCCTACCTATTCGGGCATCGGTCCTCAACGTCACTCAAGGATGTAT
ACATGCATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAG
AGATACAGTAAGCGTTATTACAGCTTTCAGCCATGGATGAGTATGACATT
TCGAGAGGATCCTCGAGTGCGTGCGGCGCAGTACATTTTTTTGAGAATCG
GAAATTAAAGTGAAAATTGTCAAAATTAGCCCAATGTTGAGCGGCTATTA
ATCCTGGCACGTACATCGGAATGCATTTCGGAATAGCGCATATGAATCTA
TCAAATTTCAGCGCTTTCTAACGATTCCAACCGCAGCTTCCTGGGCAGTC
TCGGATCTGGAGATAAAATGTGCCAAACACAAGCGACTTTACTTGTGGCA
GCACAGAGGAAATATTGATCTATTTTTGCTGATAAACTGTACACAAGCCT
ACCCCGCAGAGGAATAAATAACTCTGTTCTGTTAAAGGAAAGGTAGATAT
TCTTTGGTAAAATACTTGAAGTATGGGAGCATCGGTTAAGGTTTTTGCCT
CAGCCTTCCGGGGGTTAAAAAAAACAAAAAAAAACTGTACACAACGAAAG
TATGAGGTCAGCTGCATAACTAACCTCAACATAGGTCCAGTGGTGGCGTT
ATTATATGAGCGTTAGAGCCGGAGTTTTACCAAGTATGGCGAGTGGTGTG
ACTTGGGGAATGATAGTCTCGATGGGTTAAAGGTGTGGGGGGGGGTTATT
GTGGGTGTGGGTGTCACTCGTTCATGCGAGTGATGCAGTCAGTATTTCTC
CCTTCGGAAGGTTGTCATAGCCCATGTCGTGCGTGCCTGGTCGAAGAGGT
GCCCGAAGTTCCGGCACTCGTTCATGATCCGGTCAAAACGTAAGTCATGT
TGTAAGCAGGCCCTTGTTATGTACGAAGCAGCATGCTCAAATGTCCCCCT
CCCCCTGCACCCCGTGGTTTCCACCGTACACAGGCGGGTTGCTCAAGCTG
AGCATGGATGAGGATGGGCTGAGGGAAATGCGGGACAATATGGCTGCCGC
GGCGAAAATCGTCAAGCAGCACCACGCCGGGGCGGTGGAGGGAGTTGTAC
AACAGGTTTGCTAAGGGTCACGCACAAGCATGAGTGGTGGATTGATTCAT
TCGGCTGCATGATACCGGTACTATATGCTGCTTCGTTTTTGGGATGGAAT
AGTGCTTTTTTGGAGGGTTTGGTGCTGCTTGACGACCAACGGGATTGACT
GAGGAAATATTTTTTCCACTTTTAAAAGAAAATAGTAAAGACGATAATAC
ATATTTATTTATAATTCGTCGAGGATCGTTTTTGCCCTATCGGAAGTTCT
GATCCGAAGCGTAGTATTCCATCAGCTTTAGTTTTTTTGCAAGTTACTCT
TCGTGGTACAGAACTGCAAAAAACATGATCTGAAACGACCATCAATACCT
TCGCGTACTCATATAATAGAGATTGAGCAATAAACTGTCCCTGACTGACT
GATATTTGAACACCCGATGGCTGAGATATTATATTTATTTAAGCACCCAT
CGCCTGAGCTCTAAATTAAAAAGTCTTTGAGATAAATTGTTATATGTTGT
TATATAGTTTGGGAGGTTTTCAAGGATTGTATTTGTTTTTCCACCATGAG
GACAAATCGATCCCCCACATTGTAGAACAGCAACACCTCCACACCTTTTC
CTCCCACATACATTCCCCTTCTCTACCCACCCCCCCCCCGCCCCCCGCCC
ACACAGCAGCCGCAACAACAAAACGGGGGGTCCAGCAGCACGCCCCACAA
GCGACCTGCTTCAGACCCCCCCGCAGGCCAGCCTCCCGCTAAGACCTCTC
ACCCCCCGCACACCGTAGGAAACTCAGCGGCGACTCCCGCGGCCGCGGCC
GCCGCCGCAGCTGCAGCCGCTGCTCTAGCGGCTGCCGACGCCGTCGCCGC
ACTTGGCTCCGTCCTCGGTAACGGCCAGTCCCCACCGATGCCACAAGGCG
GCGAAGCCGGTGCCGCAGGCCCCGCCATTAGCCAAGGTCCCACCGGCCCA
CGGATGCCATCGGCCATGGTTGGCAGCGGCGGAAGTGGCGGTAGCGGTGG
GCGTGACAGTTCTTCGGTTCTAGTGGGGATAAACGGGGGGGCGGCTCGTG
GCCCCGCCGCGGCAGCGATGGGAAGTATGGGTTTCTCCGCAGCACACCAC
CCTTTCGGGTTCGGGCTAACGCAGCACGTCCCTCCGTTCAGCTTCCCACC
GCCACCGCCGCCACATTTCTCGCAAATTACCGGCAGCGCCGGTGGTACCG
GTGGCGCGGGGGGTGGATCGGGTGGTAACAGCGGCGCCGGAGGAGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2918:8999..14096+ >mRNA_H-paniculata_contig2918.7958.1 ID=mRNA_H-paniculata_contig2918.7958.1|Name=mRNA_H-paniculata_contig2918.7958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at H-paniculata_contig2918:8999..14096+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCACAGCAAAAGCCAAAGAGAGCTACAGCCGATGAAGCATCAGGCCCAGA
CGTGGGCGTGTCTGCAAGCGCGCCGGGAGAAGCCGCTGGTCCCACCGCTC
CCGCGCAGGACGCCGCGGCTCGGGCACCAGGCGCGGCGGGTGGTAGCGGC
GGTGGTGGTGGCGGTGGCGGGTTGCCTATGAACTATCCTTACCCGATTGC
CTACCACCCCACGCCGGGAAGCTTTGCTGTCGCGCCGTCGTGCGCCGGAC
CGTCTCCGTACGCATTTGTTGATCCCTATGCTTTCCAACAGCCACAGCAA
AAGCCAAAGAGAGCTACAGCCGATGAAGCATCAGGCCCAGACGTGGGCGT
GTCTGCAAGCGCGCCGGGAGAAGCCGCTGGTCCCACCGCTCCCGCGCAGG
ACGCCGCGGCTCGGGCACCAGGCGCGGCGGGTGGTAGCGGCGGTGGTGGT
GGCGGTGGCGGGTTGCCTATGAACTATCCTTACCCGATTGCCTACCACCC
CACGCCGGGAAGCTTTGCTGTCGCGCCGTCGTGCGCCGGACCGTCTCCGT
ACGCATTTGTTGATCCCTATGCTTTCCAACAGGGTCCACCGCCACCCCCT
GGTTCTCCACACTACGCTCACTTCCCCAGCTACGGTGGCTTCAAGGGCTA
CGCGTTCAGGACGCCATTTTCTAACCCTATGTCGCCTGGCGCCGCTGGTC
AAAGAGGGCCGCAGGGTCCACCGCCACCCCCTGGTTCTCCACACTACGCT
CACTTCCCCAGCTACGGTGGCTTCAAGGGCTACGCGTTCAGGACGCCATT
TTCTAACCCTATGTCGCCTGGCGCCGCTGGTCAAAGAGGGCCGCAGTCGG
GGGTAAAAGACGGAGCTGGTAGCGGCCCCGGGGTCAGCAGTAGCGTCGGC
AACGGGGGCATCGGTCTTACCCTGAATATGTCTCTGGACGTGGATGGCAG
TGCACGGGGGGAAGAGGGGAAGGAACACTCCGCGCTTGGGAGCGGAGTCG
GGGGTAAAAGACGGAGCTGGTAGCGGCCCCGGGGTCAGCAGTAGCGTCGG
CAACGGGGGCATCGGTCTTACCCTGAATATGTCTCTGGACGTGGATGGCA
GTGCACGGGGGGAAGAGGGGAAGGAACACTCCGCGCTTGGGAGCGGAGGC
GGGTTGCTCAAGCTGAGCATGGATGAGGATGGGCTGAGGGAAATGCGGGA
CAATATGGCTGCCGCGGCGAAAATCGTCAAGCAGCACCACGCCGGGGCGG
TGGAGGGAGTTGTACAACAGGCGGGTTGCTCAAGCTGAGCATGGATGAGG
ATGGGCTGAGGGAAATGCGGGACAATATGGCTGCCGCGGCGAAAATCGTC
AAGCAGCACCACGCCGGGGCGGTGGAGGGAGTTGTACAACAGCCGCAACA
ACAAAACGGGGGGTCCAGCAGCACGCCCCACAAGCGACCTGCTTCAGACC
CCCCCGCAGGCCAGCCTCCCGCTAAGACCTCTCACCCCCCGCACACCGTA
GGAAACTCAGCGGCGACTCCCGCGGCCGCGGCCGCCGCCGCAGCTGCAGC
CGCTGCTCTAGCGGCTGCCGACGCCGTCGCCGCACTTGGCTCCGTCCTCG
GTAACGGCCAGTCCCCACCGATGCCACAAGGCGGCGAAGCCGGTGCCGCA
GGCCCCGCCATTAGCCAAGGTCCCACCGGCCCACGGATGCCATCGGCCAT
GGTTGGCAGCGGCGGAAGTGGCGGTAGCGGTGGGCGTGACAGTTCTTCGG
TTCTAGTGGGGATAAACGGGGGGGCGGCTCGTGGCCCCGCCGCGGCAGCG
ATGGGAAGTATGGGTTTCTCCGCAGCACACCACCCTTTCGGGTTCGGGCT
AACGCAGCACGTCCCTCCGTTCAGCTTCCCACCGCCACCGCCGCCACATT
TCTCGCAAATTACCGGCAGCGCCGGTGGTACCGGTGGCGCGGGGGGTGGA
TCGGGTGGTAACAGCGGCGCCGGAGGAGGGCCGCAACAACAAAACGGGGG
GTCCAGCAGCACGCCCCACAAGCGACCTGCTTCAGACCCCCCCGCAGGCC
AGCCTCCCGCTAAGACCTCTCACCCCCCGCACACCGTAGGAAACTCAGCG
GCGACTCCCGCGGCCGCGGCCGCCGCCGCAGCTGCAGCCGCTGCTCTAGC
GGCTGCCGACGCCGTCGCCGCACTTGGCTCCGTCCTCGGTAACGGCCAGT
CCCCACCGATGCCACAAGGCGGCGAAGCCGGTGCCGCAGGCCCCGCCATT
AGCCAAGGTCCCACCGGCCCACGGATGCCATCGGCCATGGTTGGCAGCGG
CGGAAGTGGCGGTAGCGGTGGGCGTGACAGTTCTTCGGTTCTAGTGGGGA
TAAACGGGGGGGCGGCTCGTGGCCCCGCCGCGGCAGCGATGGGAAGTATG
GGTTTCTCCGCAGCACACCACCCTTTCGGGTTCGGGCTAACGCAGCACGT
CCCTCCGTTCAGCTTCCCACCGCCACCGCCGCCACATTTCTCGCAAATTA
CCGGCAGCGCCGGTGGTACCGGTGGCGCGGGGGGTGGATCGGGTGGTAAC
AGCGGCGCCGGAGGAGGG back to top
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