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Homology
BLAST of mRNA_H-paniculata_contig2914.7946.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI) HSP 1 Score: 259 bits (663), Expect = 6.960e-76 Identity = 138/349 (39.54%), Postives = 194/349 (55.59%), Query Frame = 3
Query: 378 CPPCAQLFSKLEYTDSAQRKRSQRVEVMERGEPKSGTGFMFEWAGNVLIHTCDYLNDRFGQNSCSIRMS-----------MSEDNLRDLRVISLSFMPGL--------GSYDAPCSCDEVDSVFIGLSSRGKHMLPMSAKCPLAHKNGILYEENACIFPNGTLMQNVDDIRPCIEENSCPVHDHRQQMVVMRDPRPVVVSSYFFAWAHHNAALKR---ESLDAYVVRMFPTVCQWVAIRYYFFQDMVPDKAIVLWYDESLEDPVRWHARFLNFVGLRPPAEVIEVATDAATTRDFRFYSKGVDKHIGGKESSVKRTYAQELKPETLAGLEDIMRIWLPSELLHRFGVSS 1358
CPPC +F KL + AQ Q VE+ RGEPKSGT FMFEWA N L+ TC+ L +G+ +C+ R E L D++ + F P G +PC C VD V I +SS KH LP+ CP H + + E C NG + N D C++++ C + D R QM+++RDPR V VSS+F HH+ K ES+D++V+RM PT+C ++ +RY + + K + YDESL DP++WH R+L+ VGL PP V+ AT+ + R++ F KGVDKH GGKE++ KRT+ E+ + LE I R WLP LL +FG+ +
Sbjct: 83 CPPCETMFGKL---NGAQ----QHVELQLRGEPKSGTSFMFEWAVNALMVTCEELGRLYGEGTCTFRWRGFFSRRKQKPVSPETALVDMKEVFFVFKPNRQHGRSSAGGPSASPCPCSTVDKVSIMVSSLFKHDLPVPPSCPWQHVDNVTPENKGCTTVNGRRVGNYTDTVECLQQHPCRIVDDRIQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLRREYGFAGKGVDKHPGGKEATEKRTWEDEISHDVAEQLEGICREWLPPVLLEKFGIGA 424
BLAST of mRNA_H-paniculata_contig2914.7946.1 vs. uniprot
Match: A0A6H5JP89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP89_9PHAE) HSP 1 Score: 138 bits (348), Expect = 2.070e-34 Identity = 66/150 (44.00%), Postives = 94/150 (62.67%), Query Frame = 3
Query: 918 SSYFFAWAHHNAALKR---ESLDAYVVRMFPTVCQWVAIRYYFFQDMVPDKAIVLWYDESLEDPVRWHARFLNFVGLRPPAEVIEVATDAATTRDFRFYSKGVDKHIGGKESSVKRTYAQELKPETLAGLEDIMRIWLPSELLHRFGVSS 1358
SS+F HH K ES+D++V+RM PT+C ++ +RY + + K + YDESL DP++WH R+L+ VGL PP V+ AT+ + R++ F KGVDKH GGKE++ KRT+ E+ E LEDI R WLP LL +FG+ +
Sbjct: 8 SSFFHLKTHHTPLWKYWHDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPAVVLQATNTSLRREYGFVGKGVDKHPGGKEATEKRTWEDEISREVAEQLEDICREWLPPVLLEKFGIGA 157
BLAST of mRNA_H-paniculata_contig2914.7946.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE) HSP 1 Score: 112 bits (280), Expect = 8.730e-25 Identity = 64/191 (33.51%), Postives = 98/191 (51.31%), Query Frame = 3
Query: 795 PNGTLMQNVDDI-RPCIEENSCPVHDHRQQMVVMRDPRPVVVSSYFFAWAH----HNAALKRESLDAYVVRMFPTVCQWVAIRYYFFQDMVPDKAIVLWYDESLEDPVRWHARFLNFVGLRPPAEVIEVATDAATTRDFRFYSKGVDKHIGGKESSVKRTYAQELKPETLAGLEDIMRIWLPSELLHRFGV 1352
P NV I R C+ ++S Q V+RDPR V VS+YF+ +H + + +SLD V+ + P +CQ+ IR+ F + DK+ + WY++++ DP+ WH R+ +F G PA I+ D T D H GG++ S KRT+ E+ P ++ I+R WLP LL R G+
Sbjct: 9 PTAWFNPNVPTIVRHCLLDDSL-------QFAVLRDPRAVAVSTYFYVKSHPAFYSDHVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWIK---DIDATLPEAQQKVKRDPHPGGQQVSSKRTWEDEISPAIREEMDSILRTWLPGVLLERLGI 189
BLAST of mRNA_H-paniculata_contig2914.7946.1 vs. uniprot
Match: A0A6H5KPP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP2_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 4.480e-9 Identity = 45/128 (35.16%), Postives = 59/128 (46.09%), Query Frame = 3
Query: 378 CPPCAQLFSKLEYTDSAQRKRSQRVEVMERG-------EPKSGTGFMFEWAGNVLIHTCDYLNDRFGQNSCSIRMSMS-----------EDNLRDLRVISLSFMPGL--------GSYDAPCSCDEVD 683
CPPC +F KL + AQ Q VE+ RG EPKSGTGFMFEWA N L+ TC+ L +G+ +C++R E L D++ + P G +PC C VD
Sbjct: 81 CPPCETMFGKL---NGAQ----QHVELQLRGASRIQYQEPKSGTGFMFEWAVNALMVTCEELGRLYGEGTCTVRGRRPFSRRKPKPVTPETALDDMKEVIFVINPNRQDGRSSAGGPSASPCPCSTVD 201
BLAST of mRNA_H-paniculata_contig2914.7946.1 vs. uniprot
Match: F0YR95_AURAN (Sulfotransfer_1 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YR95_AURAN) HSP 1 Score: 55.5 bits (132), Expect = 6.480e-5 Identity = 35/148 (23.65%), Postives = 75/148 (50.68%), Query Frame = 3
Query: 858 PVHDHRQQMVVMRDPRPVVVSSYFFAWAHHN--AALKRESLDAYVVRMFPTVCQWVAIRYYFFQDMV--PDKAIVLWYDESLEDPVRWHARFLNFVGLRPPAEVIEVATDAATTRDFRFYSKGVDKHI--GGKESSVKRTYAQELKPE 1283
P+ D+ + ++++RDPR VVVS WAH+ +K ++YV + P V++RYY+ +++ + +++L+Y++ + +PV + R +F+ + +V+ D + R K + H+ G +S + + P+
Sbjct: 28 PLPDNTRYVLILRDPRAVVVS-----WAHYKNKGLVKGNVTESYVTKTVPQCAAIVSLRYYWHDELLRRTNPSLILFYEDLVANPVDEYYRLASFLDVNLEPDVMFGVVDQTSAASMR---KDEEHHLLPGPNRASSDKAKVRSATPD 167
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 4 |
| Model size | 2116 |
| Cds size | 1095 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2914.7946.1 >prot_H-paniculata_contig2914.7946.1 ID=prot_H-paniculata_contig2914.7946.1|Name=mRNA_H-paniculata_contig2914.7946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=365bp
MKASHLVLGLLSAPARRAVARVPKLTATSGEAAQQTCPPCAQLFSKLEYT
DSAQRKRSQRVEVMERGEPKSGTGFMFEWAGNVLIHTCDYLNDRFGQNSC
SIRMSMSEDNLRDLRVISLSFMPGLGSYDAPCSCDEVDSVFIGLSSRGKH
MLPMSAKCPLAHKNGILYEENACIFPNGTLMQNVDDIRPCIEENSCPVHD
HRQQMVVMRDPRPVVVSSYFFAWAHHNAALKRESLDAYVVRMFPTVCQWV
AIRYYFFQDMVPDKAIVLWYDESLEDPVRWHARFLNFVGLRPPAEVIEVA
TDAATTRDFRFYSKGVDKHIGGKESSVKRTYAQELKPETLAGLEDIMRIW
LPSELLHRFGVSST* back to topmRNA from alignment at H-paniculata_contig2914:1313..13283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2914.7946.1 ID=mRNA_H-paniculata_contig2914.7946.1|Name=mRNA_H-paniculata_contig2914.7946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11971bp|location=Sequence derived from alignment at H-paniculata_contig2914:1313..13283- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTGTCTGTTGTGTCTGTTGTGTGGATATCTCTTTTCACGGGCGAGCTTG
TTGCTGGGGACTAAAAGCTGAAGACTAGAGAGCGTTGGGGCTCGCTGTTG
ACAGGGTTGTGGCACCTACTTCCAGTGGCCCCCCACTTGGAAACCTCTGG
CTTTTGGCGAAAGCGAGCTAATTTGCCTTCCGAGAGAGGTACGTTTGTCT
GTATTTCTTTGCTTTGGTCTCTGCCTCTATTACAAGTACATAGTGGAACA
TTCTGCGATTGGTTACATGTTGTTGCGACTGCTGAACGATTCTGATGGAT
GGGGCAATATTTGTTGACATGCATAGGAATTGCAGGTGGTCAACTTCACG
AAGAAAAGAGTGCTTGCCTATTCGAACGAGTCGCAGAGCATGTAAGGTTC
TTTGTAGATCACGAGAAGAATTTTATTATCAGCTCTATTGTGGGCCCGTC
CCTATCCTGTCATGCAAGTCTAGCCTGAAGGTATGGTATACTTTACATTT
ACGCTTCTATGTCGTGGACTGTTTAAGGATTCGTATCGGTAATGCTGTAG
GTGACTCCTACTCTACTTGATATGATATAGACGGTCAGAAGAACAGTGGT
GCAGACGGCCCAAAATAGCGGTACTGCACGACACACCTCCATGGATCTAC
AGTGCTGTTATTTTGGCAGTCTAGAGCAATCTAGCTCAGGTGGCAAATAC
GCCAACCGTGGCTCAAACCGTATACCCAAGATTTGTTGTGCTGCTGTAAT
ACTGTACTGTCACATCCATTGTACATGTTTTCTTGAGTGTGTACCGCAGT
TGTTGTACGTGGTATAACACCCCCCCCCTCCCCCGATGATTGCGTTGTAC
CAATCGAAAACTTCCATCACGGTGGAGGGATAATTTCGGGGATATTGGGT
GATTACTTCTAACTACCTGTATGATGAACTCTGATTGTTTGCATTGCGGT
GTTTCTCATTGTACTGTTCAACTCTCCAACTTTCACTTCTCAATGGTAAA
TGTCTCATACAGGATGAGTTTTTCGTGGAACATTTTCTCCCCGGACAAAT
ACTAATACTTGCAAATGTTTTTTAACACAAAATTGGAAGTATTCGCCTGA
GTTTCACAACGATTTCGTATATTCTAAGTGTCTTGGACCATCCACAACTG
CTAATAATACTCGTAAATCGAATGGGCAGGGGTAGGTACTTTGTTCTATA
TGTCCGCTCATTCTGAAACTCAGGCAAATGCTTTCAGTTTTTGTGAAAAC
TATTTGCAAGTATTCATATTTGCTGGGTGACCATTTTTCAAGACATGGTA
TTTGCGTTGTCCATCATGGACGAATGCATGAGACTATGTTTTATCTAGAA
ATGGGAGATAGAGAGTACACACGAAATGTTCCTTTTCAACAAAACTATTT
TGCTCTGTAATGGGTCGAATTTATCTTTCACCAATCGTAAAGATTTTTCG
ATTTTTGCACATTATTCAACCGCGTTTTTTCAATAGTCCCCAGCACAGCA
GGGGACTTTCTTAACAAGGCTGGCTGATTGAAACAGTTAGAAAAGATAGC
GTCCAAGCACGATCAAGGCCCCAATGTGTCGATAAAACGTTTGCAAAGCT
ATGGTCTAAACGGTTTGAAAAGCAAGTGATCCCAAGAAGGATCAAGACCC
CAATCTCTATCGATATCACAGATGGTGAATTGCGAACGCGTGACTGAATG
CGGTCCCCGCCGCCAAATTTCACCACAAAACAAGTTGCATACCTCCAACC
GTAGCTCTTTATCAAGTGAGCTATCACCATTTACTTGAGGTTTGTGTAGA
ACGCCCCAGGCTTGAAGGAGAACATGTGTTGTCTAGTACGTGCGGTGGGG
GCAACCCAAACGTGAACAAATAGAAGGCAAAAACGGCACTCCTCGCAATT
GCACCTTGACTTGACATGTTTGGCGAGGTATTCGAAACAGAGAAATATAT
CGCTTTCTTGAACATGAAAAAAGAATCGTTCCCTTGGTAAGACACGGCAA
CATGGCCGGGACGTGAAATTTTGAAATGTTACACTCGGCCAGGGGGTGTC
ACAGAAGGCAGGGCTTGAACTACGTAGATCCGCCCTCAGGACATTCCCTT
CCGCAATTCTGTACGGGTATGTTGTGGCTAGTCTGCCGGGTCGTGTAGGC
GAGCTGACAGGCCTCTTCGTATGATGTGTAGGTGCTACTTCATGTGTCTA
GCCCATGCAGCAGCGTAGGGCAGGCAATCAACGCTGCAGCACCATCTTGT
CTGACGATATGATTCATTCATCTTGCATAGGTTCAGGATCCACCCTGCAT
GAATGCTTGCTTCACACTATTCATAGTTGCGCAGACCCGTAGGATGTTTT
TACTTTCTAGTTTTTTAATACCATTAGAAAACGACTGATATCTCGAGAAG
TACATAGCTCTGCCGGCGCACACTGAAGCTAGGGGCTGGGATAAGGGTTA
GGGTTCGGCGTTGGTCCTGCTTGCGTCGGGGCACCACCGAGTGTGAACCA
TCAAACGAAGGAGCTGTCAACCATCGTGTTCGACCAAGTGGTAAAAGGTG
TTTCCATTTATCTACTTTTCGTTGACCCGTCAGACTTCCAAGTAATGTTA
CATGCACCGTCCTGTATTAATTAAACCGTGTATCCCGCGTAGAACGATCG
ACACTGCGACCTCAGCAGTGTATCTTGTGAGATGATGTTCACTAGATATA
TTTTTGAGCTGGAGGGAGGAAGGAAAGTAGAGTGCCCAGCATGGGCAATG
ATCTCTCCAATTCTGGTCACACGATGCAATTCTCAATACCAATCTCAGGA
AAGATCTCTGATCATATTCCACCACGAAAGTTCAATCCACATGAGACATG
CAACAATAGCCCCAATACCTGCATACAATATCCCGATATGTAACGGCCAT
CGGACAATATTTGTCCGATGTAGCAAGCCAAATGGACACTGTCCCTGTCT
CATTTACATCGGTGAGCCTCCAAATCGGCTACAAGTAGCCTTTACTTTAC
TTGCCAATGACAAGAAAAAAATCGCGTGTGCACTTTAAAAGTCGGCCTGC
CCAACACTTTTGTCGAAATGTTCGCGCATTGTTCTACTCCTTGCTATATA
CGTGATCCTAGTCTCATCCTTGTCTACCAACACGCGCAAAAATGGTGTCT
TACGCCGATATGCTTACTATTCGATGAGCTCAGGGGAGTTTCCGCGAACG
CCTTTGCCCCCTTGCTGTGTTCGAATACTGAAATGGGTAGAAACTCCACC
TCTTGCCTAAGGAACTTCAGAATCCCCCTCAGATACCTAGCTTCTTTGAC
CTTTTCAGCCATGGACACGTATTCCGCTTCGGTAGTTGACAAGGTCACAC
ACTTATGTGTCCTCGAAAACCAAGTTACCAACGCACCCCCACAAAAGATA
GCAGCCCCTGCCACTGAACGCCTGCCATTCGCTTATAATCAGCATTTTCG
TAGGCATTAATATCGAAAACAACCTCTACATTTAAAGAATCTTGTCTACT
GTACGCGAGACCGAGGTATGTCGTGGCCTGCAGACACTCGAGTATTTTGC
AGACCGTCTTTCAGTGGACCTCCTTGGGATCATGAGAGAACCCCGCCACC
GCCCGTACTACATCGGCGATGTCGAGCCTCGTCTGACCGGCGATCCACAC
AAGGCTCCTTACCACCTCTCGGAACGGCACATCCACCACAGTCTCGTCGT
CGCTTACGTGCCCGAGATCCAGTGATGGAGAAGCAGGAACGGGGCTGAAT
TTTGTTACTGGAAAGCGGTCCAGCACATTACGGATGAATTGAGTTTGAGA
AATCTCCAAAGTTCCCCTTTCCCTGTCACGCTTGTACTCACTCTTCGTAT
AACATGTCAGTTCGCCGAGATTTTTCGTTGGAGACCTGAGATTGAGACAT
TTCGTCACTATCTCCGCTACCTCCTCGGAAGCTCCAATCTGAATATCATC
GACGTGAACTACGATCGTTGCGACTACCTCTCCTCCTACCATGGGTCTCA
GCACGCACGGATCCACCAAACACTGCTCGAAACCAATTTCCTTCAGTGTA
GACAGGAGCAACTGATACCACAACCTGCTTGCCTGCTTCAGGCCGTAAAT
GGACTTCTTCAGCAACATCACCTTACCAGACATCGAACCGCATCCAGGGG
GAAGTCGTAGATAAATCTCAGTGTCCAAGTCAGATTGCACGAATGCCTGT
TCTACATCAAAATGTCTCAAATCCCAGTCAAGCAAACACACGATCATCGC
CAAAAGTCTGTTAGACGTTGCCGACGCTGTAGGAGCGAAAGTCGCATGGT
AGTCAATACATTCTAGTTGACTGTATCCCTTCCCCACCATTCTAGATTTT
GCTCTTATCAATTATGCCCTGTGGATCACACTTCCACTTGTACACTCACT
TCGAACCCACAAATCCCTCTGGCACCTCTTTTACTTCAGAAAATGTTCCT
GCTGCTACAAGTCCCTCAAACTCTGAATCCATTGACTTCTTCCATACATC
GGCGTACATCGAGGCGCATAAAGGATGTAGGCTCTGGCTCGGCTTCCGCG
ATGGTGCACTTAGGCGGACCGTCCGATTCGACCACTTGTTCCGCCACCAA
GGCATGCACAATCCGACCCCCTTCACTGTGTCGCAACATGGCGATCTATC
CTGTCGACTCTGAATGCTGTAGTGCTCTGGTTTCTTGTGTTGCCCTACCC
CTGTGGACATCGCCTACGTCGCGTGGACCTGGAATGTGAGTTCCAAGCTG
ACGCGCCACTGTCCGTATCGCTGTCGGTATCTTGTTTTTTTCACCTTAAT
ATGTTGATTCGCTTCCTCCGAACGATGAGTCGTCACCTATAGAACCGCGT
TCACTCTCCAACTCCAACGTATCGAGCGGTAGCGCGATTGTGCCTCGTCA
TTATTCGGCACAACTTCCGGTCCCTCTGTCTCCGGAAACACTGGAATAGT
CCTCCGCCGTTGATGGGGAATCCCTCTCCCGATTAACGGCAACGGCGGTG
GCGAAGAAGGGTCGAAGCAGTCCTGTGGCATCGTGTTGTTCCCTCCCTGA
TCCAGCATCTCTAGCCTTGAGAGCGGCGGCGGTGCTATCTCCTCCGTCGC
CGGTGCCCCCCACGTGACGTCTCTTGCCGTCACTACCTTGTTTGCCCGTG
TCAACATCCGCAGCGAGTCTCGCGGATGGTCGATTTCCGGCCCGAGATAA
AAGCAGCTCTTAGCATGGGGAAACGATTTTGACGGGGCGATTCCAAGGAC
AGTACCCTGATCGAAGGAAGTTGTGAGGTGTGACCGGGGCTGGCGCCCCA
TGTCACATCTCGTACGGTGATTTATTGTTCAGATTGGGGACGGTAGCAGT
ATGGATTAGTGCATCACACGCCCATTGCATTGACTCTTCTCAAAGTCTCT
CTGACGGCGGAAGTATTGCGTGCGGGAAGATTGTCGGTGCCTGAATCCTT
GCTGCTAGCGCAGCCTTTTCAATGATGCCAAAGACCTCTCTCTGCAACAC
CATTAAATTCCGGACTCTTCGCAGTCGTGAACTCTTACTTTATATTGAAA
TCTCTGCACGCTAGAAAATGCATCACCCGAAAAATGAACTCGTTTGAGTG
ACCATACAAGCAGTGGAAATTATTGATATCCATTACAGGGGGAAACTCGG
AGTTACCGGGGGCGAGGACTGGAATTGCCAAACCGGTATCTCTAGGCGCA
ATGCTAAGCACGACACTGTCAACACCCTCTATCTCAAACATACGCGAAGA
AATTCCCGGAAAGATAGAATGGAAATCGTTGCTGTCAAACCATCGAAAGG
AAGCTTGAGTCTACCATCAAGAAGGCTGAGAGTCTCTCATCTTTTTCAGA
CTCGTAGGGCATCAGGTTTTGGTGTGCGGTAATAAGTGAAAACAGATTGA
ATCAAAAGTCCGGTACATACGCCACATCATGGATGGTCAGTAAGTACATC
ACCAGTTTCACTTGGAAAAACAATGGTCGGTGTGCCTACACACTCGACAT
TAATCGATCCAGAATTACCAATCATTCAGTCTTTCGTCTGATGGCTGGAT
GTTAGTCATGAAATCCTGCGATCCAGTCATGAAACGTCGCTGCAATGTCA
CCACGCTATATCTCAAGGTCACTATCCAAACCGAATTCATCATTACCATC
ACTATGGCATTCGCTAACCAACTCAAGCGCGGCATATAGCATGCGCTCCA
GAATCATGAGAACAGCTTACACCTACGGCATTTTCCAATCCTATCGGCTG
GAAGTTTCGAACCTCTGGTCGATCTTGAGCTTTTGTGGTCTGAAACCATT
TGCAGCAGTAGAAGCGGCAGTAGCATTAGCAATAGCAGAGCCAGAACCAG
TGCTATCTTGTCACGACTAGTCGTCCTACCGAAACGTGCACGCTGACCCT
TCATTTTTCCATTCTTGTTGGAAATCAACACCAAGCCTGTCCCGCATCCT
TCTTTTAAGAGAGAGATCGAGACGGTTCAGTCTTACTAGACTCTCAATCT
TGTGCCTGTTTAGATCATCTAAGCAAAGCAGGTGTTTTTTTTCATAGTGG
TACTCGGAAGTCAGGCCTTCAACTAGCTTGTGATTGACAGCCCCGTCTGT
TCTGGGCTCTCTCAAAGAACGCAGTACGCTCACCATTTCATCTACTCTCG
CCAAGTATTTGGCAGGAATTTCGCCCCTCGTCATAGTTACTGGTTCAAAC
TTTTTCTCCCACGTCGTGATCTGACCCTCAGAGTTGGAAACAAAGTATTC
ATTTAAGTACGACCACGCGACAGTCGGGGACTGTAGGTCATAAATGACTG
AGTTTATCCCTTTGTGGAATGCTCGAAGTGAGGCAAGTCCAGGCGTCCCT
AGTTTGCTTTATTTCTGTCATATTGAAGCCTTCTGCGCCGAGACTCTAGG
GAAAACGTCTCGCTTCCTACTTTGACTTCTCTCGGGCTGGCGAACGCAGC
AGTACACCCTGCGATATTCACAAACTCCAAAAATAACTTCTTCCGCATCA
AGAAATTGATTTGTACTCCATCAAACTTCGGCACGGCGCTTTTGATGTGT
GTAAGGTACCTTATGTCTATCGCAAACATATCGATACTCATTGATGTAGG
TTCATTTCCTACAAGTCAACAGCCGTCCTCAGGCCATAAACATTGACTCT
ACCTATACCCACAGCCGCGGTGCCATTTCCGCCGCGTACACTAGCAAGTT
CCCCGTTGCTGGTGTCGGGTCCCTCGTCTGTGCCGACAGAGTGTTCTGTA
CTGACACCGTCTACGCCACCGGGAGCTTCCTCTAGCTTGCGTAAGCGGGT
TTCCGATGCCCGCTGGCGAGTTTCCGCTTCTCGCTGGCGTGTGATGGCAT
CCTCTTGTCGCTGCTCCTGTCGGTTCCTGTTCTAACTGATCTTGGATAGA
CTTGCAAGTACAGCTTCTATCGACTCGGGACTCCTTTCTGCTATTTATCC
TTACTCGCTATCAGACAATATCTATCCGATGTATCAGGTCAAATAAAATT
TCTGCTGCTTTTGCAAGGTTCGTTTTGGCTCATGAAATTTCAGGGGATAC
CTGTATTGCGTATAGAAAGTACCCAGCATTCCATGTTCTCACATTCGCTC
GTGGACAACAATCACGACCCTTATTAGCACAAATGCAAGCCAATCCTGTC
ATTGCCGCCCCCCTCCTTTTGTCGCGCTGCGATGCCCGTATTCCTCCCAG
GATTTCCTGTGTTGTTGCGATACTCGGCTTGATCGGTCATAGCCACATAC
ACGGCTGCCGAGTCACGCTGTGTATCGAGCAATGAAGGCGTCACATCTGG
TGCTTGGTCTACTATCGGCTCCAGCTCGTAGGGCGGTCGCTCGAGTTCCG
AAGTTGACTGCTACCTCGGGAGAAGCAGCCCAACAGACCTGTCCTCCGTG
TGCGCAGCTTTTCAGCAAGCTGGAGTACACGGACTCCGCTCAGAGGAAGC
GATCCCAACGTGTGGAAGTTATGGAGCGAGGTTAGTCGCGTCCAAACGAT
CGACTTCTGCATGCGATAGTAGTATAAATTGTGGTAAGACAGATTTGTCA
ATTGATGGGCAATCCGTGGAAGCCGCGAAAATGTCGTGTGTATGAATCAT
GTGTGACCCTTTTCCCAAACATGTATTTTAAATCAATAACATGGACACCA
TCCAGTCAATGTGTGGTGAATGAGATTTGCTTTAATTGTGATGTCCACGA
TAGCATGGGGAACAGAGGTAATTAATTCACTGTGAGAGATCCATTGTAGG
TTAGATCAACCAGCGCAAACATAGGTGCAACCCTCGAGAGACCGCAAGAT
CTGCCCAGGCGACTTGACGTGTAATTGCCATTTCCTTTCCACCCCAGAGT
GTGCAACCACTGTTATCACCACTCGGAAGCGTTGTGAGGGGAGGAGCTTA
AGCCCATGTAATTGCCATTAGGTGGGATGGTGTCCGCCCGTGATCTCACC
TAGACCTATCCGCATCGAGAAGACATCGGTGTGGCATGCACAGGGAGGTT
CTAATAAACCTCTTCCCTCAGTCCTCGGTTGGACAATATTGTACCACGCG
ACCCACTGAAAAGAGGCTAATGCCTCCACCACGCAGAGCATGATGATTTT
GAGTCAGCAGTAAGCTGTCCCCTAAACGAGGAATCTTTGAATGATTGAGA
GTCTTAATACGCTAACTTGTTTAGCGCGTTCGGCAGACGGCACACCCCCC
GGGAACAATATTTTTGCACCATCCACTTCCCCGCCCGCATCGATTCCATC
CGTCTCTCATGTACTGGTGTATAACACATTGAGAAAGTGTGTTCCTATCA
TGTTGGATAGGGAATAGTATAACAATATCCTCGGGCAGTGAGAAAGACCC
CAGATGTCCCATTCGGGAATTTTCCGCCTCTAACACGCTACCGCCCCCCC
CCCCCCCCCCCGTCACCATTTTTTTTTGTTGCCGATAAGAGTACACAACT
GGAGTTTGAGGTCAGCTATATAACCTCAACAAGGGTAAAATAGAATTATT
ATGTGAGCGTTAAAGCTTCGTTCTACTAACTGTCACAAGTGGGTTGACTT
GCGAATGAGAATCCCGGTGCATGAAAGGTGGGAGTTTTTTCAAGGATGTG
GTTCGTTCTGGTGACCCCTCCCCCCCCCCCCGGATCGTTAAATGATTCGG
ACACAAAATTTCGATAGCGTGTAAGTTCATGCTGGGTAGCCCCCCTTCAA
AGACGGAGAAGAGGATGAACAGAATACGACGGCTATTTGAACGCTGTAGG
AAGTGCAGTCAGTGGAGGAAATGAACAGAGCATATCCACTGGATTGAACG
CTATTTTAACGCTGTAGGAAGTACAGCAGTGACCAGCCGACTCTCACTTG
TACCTTTTTTATCCTCGCGTAGCGTGCTTGTGTAGTTACAAAGCAATGGT
TGCCGCCATCGGCTAATAACGTCGTGTTCACTATTGTCGGTCATTTTGCA
TACGCACACAGGCGAACCCAAAAGTGGAACAGGTTTCATGTTTGAGTGGG
CTGGGAACGTTCTTATACACACATGCGACTACCTGAACGACAGATTCGGG
CAAAACTCTTGCAGCATCAGAATGAGCATGAGCGAGGACAACCTCAGGGA
CCTGCGAGTGATCTCATTATCATTTATGCCGGGATTGGGAAGCTATGATG
CTCCTTGTTCATGTGACGAGGTAGATAGGTGAGAGAAGGGCCAAAAGATC
TGTACGGCAAGAGATTACGAGAGGCGGGGAGCGGCTGAACGATGATACAA
AATTGTATTCCATCTTGTACCGCAATGTTTGTCATATACAGTGTAATGGG
AGACACGATCGTGTAGTGTCAAGACAGTGGTGAGAAACAGAACGCGATCG
TAAACTTGTGGGAATGCGTCAATGGGTCTAGTTTTGAAACATCCAACGCG
TGAGATCTACGTAAGCAGCGATCGAGTGAAATATTCAGCATTCAGATTCG
TCAAGTAATTATCTGATGAGTGATTGGATGGGCACATCAGCGCAGCCGCC
GCTTTTCCGCTTGCAGAGTACATAACAGTTTTTCGATTACGCCAATTGTG
CATAGCGGTTAGAACGGAAATATTATGATGCTTACAGCTACACGAAGCTT
GTCGATATGCGCACAAACGGGCTTATACAGTGTTTTCTACCACATGTTCC
ACTCAAAGCCCCGTCCGATGTGCTTGCCGTTCTGTTGTCACCTGCTGTAC
CGCCAAACGGACTTACATATCCGATGCTCTACATCATATTGCACTCAAGG
CCCCTAATATCTGGTATACAGAGGTAGTCATCGAGTGACTCTTGATATTT
GGTACCAAACGCCTTGCTGTAATGTTCGTACACCTGCTCATCCCGTGTTG
ACCTGCTAATTGTAACAGTTAACATCTTGATTAAAATCGACAAATTGTTA
GCACTCAATCTTCGTTAATGAAGTTATGCCTTTCCGATGAATACTGCCCT
CCCTCGTTTCCCCCGTTTTTTCCCTTTTTCTCGATTTTTTTTTTCGGTTC
ACGACTTGTTGTCTTCCTTCTTGCTCACTGGCGCACACAGTGTGTTCATC
GGCCTTTCCAGCAGAGGCAAACACATGCTCCCGATGTCTGCCAAATGCCC
GCTGGCGCACAAGAACGGCATCCTGTACGAAGAGAATGCGTGCATATTCC
CCAATGGTACCTTGATGCAAAACGTGGACGACATCCGGCCCTGCATAGAG
GAGAACTCGTGTCCGGTCCATGACCACCGCCAACAAATGGTGGTCATGCG
AGATCCGCGGCCCGTCGTAGTTAGTTCATACTTCTTCGCCTGGGCCCACC
ACAATGCAGCCCTGAAGAGAGAGTCGCTCGACGCGTACGTAGTTCGCATG
TTCCCGACAGTGTGCCAGTGGGTGGCGATAAGATACTACTTCTTCCAAGA
TATGGTGCCGGACAAAGCCATCGTACTCTGGTACGATGAATCGCTGGAAG
ACCCGGTCCGATGGCATGCCCGCTTTCTGAATTTCGTCGGCCTGCGGCCA
CCGGCAGAGGTAATTGAGGTCGCCACGGACGCCGCTACCACGCGTGACTT
TAGGTTCTACTCAAAGGGTGTAGACAAACATATCGGGGGGAAAGAGTCAT
CAGTGAAGCGAACCTATGCGCAAGAGCTCAAGCCGGAGACGCTAGCGGGG
CTTGAAGATATAATGCGAATTTGGTTGCCCTCGGAGCTCCTTCATAGGTT
CGGGGTTTCCAGCACATAGTAGTATATTCCTAGTTTAGTGTAGCGTGGCA
CTGCTTCCTCCTGTCCTGTTATTGCGTTCGGTAGCCACGAGTAGTGTCTT
CATTTGGGTCGCCCGGGGCTGGTGAAGAGTCACGAGCAGGTTGTTTTATT
GCAGTCGTTGTATATGTAACTGTTACTCACGTGCCAACTTGCGTTTTCCC
CTGATCTGCTGTCCTCTACTACCTGTGTGTGTACTTGCACAAGATATGTT
AACTTGATCATAGTTCGTTGCCATAACACAGCCAGTCTCGTTTTGATGCG
GTAGAAGATGCATCGATCAAAAAGGACGAATATGGTTCTTCTGTATTTTT
TGTCGGTGAAAATGAATGTTCTGTGTGTGGTTGTATTATCGGTGCTGTAT
TGAGTTATATTTTGCGATGGATAGCCGTGTCTCTGGTATCACAATTGATT
GTCGTGTACAACCCAGCAGGGAGGAGAGCCTCACATCATTACTTCGTCAA
AGCCCCCATCGTTACGGTGTCAATGGTGTGTGGTAGCGTCGTGTTTTCAA
TGGCGTGAGCCTGGATGCGTTAGCTAGTAGTTTAGGTTGGAATAATAGTA
GAGGGGATAACTCGCAGCTCAACTACAGAAGGAATATTGGCGGGGAAAAG
GTGTATTGGCCGTTTTGATGTGAAATGCGAATCTGTATATAGATAGTACA
AGTAATTCAACTGGCTGGGCCGGAGACGTGTGTTTTTTTCTGTTTCGGCC
GACTGATGATCGGATGCGAAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig2914:1313..13283- >mRNA_H-paniculata_contig2914.7946.1 ID=mRNA_H-paniculata_contig2914.7946.1|Name=mRNA_H-paniculata_contig2914.7946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at H-paniculata_contig2914:1313..13283- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGCGTCACATCTGGTGCTTGGTCTACTATCGGCTCCAGCTCGTAG
GGCGGTCGCTCGAGTTCCGAAGTTGACTGCTACCTCGGGAGAAGCAGCCC
AACAGACCTGTCCTCCGTGTGCGCAGCTTTTCAGCAAGCTGGAGTACACG
GACTCCGCTCAGAGGAAGCGATCCCAACGTGTGGAAGTTATGGAGCGAGA
TGAAGGCGTCACATCTGGTGCTTGGTCTACTATCGGCTCCAGCTCGTAGG
GCGGTCGCTCGAGTTCCGAAGTTGACTGCTACCTCGGGAGAAGCAGCCCA
ACAGACCTGTCCTCCGTGTGCGCAGCTTTTCAGCAAGCTGGAGTACACGG
ACTCCGCTCAGAGGAAGCGATCCCAACGTGTGGAAGTTATGGAGCGAGGC
GAACCCAAAAGTGGAACAGGTTTCATGTTTGAGTGGGCTGGGAACGTTCT
TATACACACATGCGACTACCTGAACGACAGATTCGGGCAAAACTCTTGCA
GCATCAGAATGAGCATGAGCGAGGACAACCTCAGGGACCTGCGAGTGATC
TCATTATCATTTATGCCGGGATTGGGAAGCTATGATGCTCCTTGTTCATG
TGACGAGGTAGATAGGCGAACCCAAAAGTGGAACAGGTTTCATGTTTGAG
TGGGCTGGGAACGTTCTTATACACACATGCGACTACCTGAACGACAGATT
CGGGCAAAACTCTTGCAGCATCAGAATGAGCATGAGCGAGGACAACCTCA
GGGACCTGCGAGTGATCTCATTATCATTTATGCCGGGATTGGGAAGCTAT
GATGCTCCTTGTTCATGTGACGAGGTAGATAGTGTGTTCATCGGCCTTTC
CAGCAGAGGCAAACACATGCTCCCGATGTCTGCCAAATGCCCGCTGGCGC
ACAAGAACGGCATCCTGTACGAAGAGAATGCGTGCATATTCCCCAATGGT
ACCTTGATGCAAAACGTGGACGACATCCGGCCCTGCATAGAGGAGAACTC
GTGTCCGGTCCATGACCACCGCCAACAAATGGTGGTCATGCGAGATCCGC
GGCCCGTCGTAGTTAGTTCATACTTCTTCGCCTGGGCCCACCACAATGCA
GCCCTGAAGAGAGAGTCGCTCGACGCGTACGTAGTTCGCATGTTCCCGAC
AGTGTGCCAGTGGGTGGCGATAAGATACTACTTCTTCCAAGATATGGTGC
CGGACAAAGCCATCGTACTCTGGTACGATGAATCGCTGGAAGACCCGGTC
CGATGGCATGCCCGCTTTCTGAATTTCGTCGGCCTGCGGCCACCGGCAGA
GGTAATTGAGGTCGCCACGGACGCCGCTACCACGCGTGACTTTAGGTTCT
ACTCAAAGGGTGTAGACAAACATATCGGGGGGAAAGAGTCATCAGTGAAG
CGAACCTATGCGCAAGAGCTCAAGCCGGAGACGCTAGCGGGGCTTGAAGA
TATAATGCGAATTTGGTTGCCCTCGGAGCTCCTTCATAGGTTCGGGGTTT
CCAGCACATAGTGTGTTCATCGGCCTTTCCAGCAGAGGCAAACACATGCT
CCCGATGTCTGCCAAATGCCCGCTGGCGCACAAGAACGGCATCCTGTACG
AAGAGAATGCGTGCATATTCCCCAATGGTACCTTGATGCAAAACGTGGAC
GACATCCGGCCCTGCATAGAGGAGAACTCGTGTCCGGTCCATGACCACCG
CCAACAAATGGTGGTCATGCGAGATCCGCGGCCCGTCGTAGTTAGTTCAT
ACTTCTTCGCCTGGGCCCACCACAATGCAGCCCTGAAGAGAGAGTCGCTC
GACGCGTACGTAGTTCGCATGTTCCCGACAGTGTGCCAGTGGGTGGCGAT
AAGATACTACTTCTTCCAAGATATGGTGCCGGACAAAGCCATCGTACTCT
GGTACGATGAATCGCTGGAAGACCCGGTCCGATGGCATGCCCGCTTTCTG
AATTTCGTCGGCCTGCGGCCACCGGCAGAGGTAATTGAGGTCGCCACGGA
CGCCGCTACCACGCGTGACTTTAGGTTCTACTCAAAGGGTGTAGACAAAC
ATATCGGGGGGAAAGAGTCATCAGTGAAGCGAACCTATGCGCAAGAGCTC
AAGCCGGAGACGCTAGCGGGGCTTGAAGATATAATGCGAATTTGGTTGCC
CTCGGAGCTCCTTCATAGGTTCGGGGTTTCCAGCACATAG back to top
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