prot_H-paniculata_contig2913.7945.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2913.7945.1
Unique Nameprot_H-paniculata_contig2913.7945.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1479
Homology
BLAST of mRNA_H-paniculata_contig2913.7945.1 vs. uniprot
Match: D7G0B5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B5_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 2.150e-28
Identity = 176/568 (30.99%), Postives = 221/568 (38.91%), Query Frame = 0
Query:  295 EEAESEAFVQEAADEIALLVEDALLVNSEPA-------NASPGGDEIVINVTKNLPPRPENGTDGSSPIEEKSRATGRHVLLDVLWAASSIPSGGSDLTDRTRLESSDDRQ-----------------------------FGRSGRSRPPMQLTLSVPVVDRRAAPLKETLRSACSAFSESLVTIWPAAAAVASATVAVDKDSDGGCNTVSGDACEAVNLFGQGEPEKSAAIEATETLLCEEWTAWSRFLGATVFVAPRRINQDTHTLHGMNIDNPVLP-GLLWRGSIVPAPTTILHPRQEFSHASSSSTTAVTAPSPAH----------HSDTQLQDRDNSNVMPKLSGFAIRAVADSCDYFSRLGKENYDGEVSKGHSRGRVLMANDSEFAKVARRANTATTADAFAWASELRLARVVSPTALARVCHLLTDGALASPLELFVYDPYRFPGSSSFLEDLGKDGRGMLLVAPESPAP---GALSDMAEARNG---KGLAMVCFPCPGRRN---------SGVDVAV-AVGDDTAACETRSAAVWTVTLFRRSSEFSEEAVKALVGDN 799
            E A+ EAF + AADEIALL   A +    PA           GG E             + G DG            R  +LDVLWAASS P+ G    D +     + RQ                                         LTLS PV    + PL+  L    + F  S +TI+PA        V   +  +GG ++ S  +C   N  G    E   A +        +W AW    GA VF++          +       PVL  GLLWRG +V   T                                     H+    Q      V P L GFA+R  A +    +    E     V+ G + G          A VAR A++         A  LRLARV+SP  +AR CHLL DGALA  LELFV D  R  GS+ FL+    DGRG+LLV   + A    G     AEA  G   +GLAM CFP    RN         SG    V AV +D     T    VW+VTLFR++SEFSE AV ALVG++
Sbjct:   23 EHADKEAFARSAADEIALLTRQAAVETVTPAAPLSRRRGGESGGTEA------------DGGHDGR-----------RLCMLDVLWAASSFPAEGGGAHDAS-ANGGEQRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLSEPVDRPCSGPLRAALLGTRAHFPRSRITIFPAC-------VQTPRSGEGGGSSGSSSSCRDENGCGS---ELRRAWQ-------RQWKAWCESTGARVFLSGG--------VSAAIEAGPVLDAGLLWRGPVVAGTTRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLHNPNPPQPARAIPVFPSLDGFALRLAAAAVTPSASGPVEG----VTSGSAAG------GGPAAAVARGASST-----LGRAPALRLARVISPAEVARACHLLADGALAPALELFVEDDERCRGSAEFLKKWAVDGRGLLLVTGAAAAEATGGVRGGRAEAGKGGVDEGLAMACFPHRRGRNRRRPRELAGSGGHADVGAVEEDEGRDVTTP--VWSVTLFRKASEFSEAAVSALVGES 524          
BLAST of mRNA_H-paniculata_contig2913.7945.1 vs. uniprot
Match: A0A6H5JK10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK10_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.940e-24
Identity = 145/435 (33.33%), Postives = 177/435 (40.69%), Query Frame = 0
Query:  411 LTLSVPVVDRRAAPLKETLRSACSAFSESLVTIWPAAAAVASATVAVDKDSDGGCNTVSGDACEAVNLFGQGEPEKSAAIEATETLLCE----EWTAWSRFLGATVFVAPRRINQDTHTLHGMNIDNPVLP-GLLWRGSIVPAPTTI-------------------------LHPRQEFSHASSSSTTAVTAPSPAHHSDTQLQDRDNSNVMPKLSGFAIRAVADSCDYFSRLGKENYDGEVSKGHSRGRVLMANDSEFAKVARRANTATTADAFAWASELRLARVVSPTALARVCHLLTDGALASPLELFVYDPYRFPGSSSFLEDLGKDGRGMLLVAPESPAP---GALSDMAEARNG---KGLAMVCFPCPGRRNSGV-----------DVAVAVGDDTAACETRSAAVWTVTLFRRSSEFSEEAVKALVGD 798
            LTLS PV    + PL+  L    + F  S +TI+PA      +      + DG                     E     E     LC     +W AW    GA VF+         H +       PVL  GLLWRG +V   T                           + PR     +S +S +A T      H+    Q      V P L GFA+R  A S    +    E        G  RG    A     A VAR A++         A  LRLARV+SP  +AR CHLL DG LA  LELFV D  R  GS+ FL     DGRG+LLV   + A    G     AE   G   +GLAM CFP   RRN  +           DV  AV +D    ET  A VW+VTLFR++SEFSE AV ALVG+
Sbjct:  100 LTLSEPVDRPCSGPLRSALLETRAHFPRSRITIFPACVRTPRS-----GEDDGXXXXXX-----XXXXXXSCRDENGCGSE-----LCRAWQRQWKAWCESTGARVFLG--------HGVSAAIEAGPVLDAGLLWRGPVVAGATRTPVSASVPPXXXXXXXXXXXXXXXXXVPPRT----SSGTSYSAATL-----HNSNHPQPARAIPVFPSLDGFALRLAAASVAPSASAPVE--------GAPRG--AAAGGGPAATVARGASST-----LGRAPALRLARVISPVEVARACHLLADGGLAPALELFVEDDERCRGSAEFLRRWAVDGRGLLLVTGAAAAQATGGVRGGRAEVGKGGMDEGLAMACFPHHRRRNRRLPRELAGSRGHADVG-AVEEDEGRDET--APVWSVTLFRKASEFSEVAVSALVGE 484          
BLAST of mRNA_H-paniculata_contig2913.7945.1 vs. uniprot
Match: A0A6H5JEQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ1_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 5.860e-21
Identity = 132/404 (32.67%), Postives = 175/404 (43.32%), Query Frame = 0
Query:    1 MDRFVILVAEPAPLLSLYAAAAKAAAAVGHRQAVTKRRHDSRLEPWLIMKAIQDLQHLKIVVDSMSEFCRH-----HYSICISSSSS--GISGPDSLSLPQN--LSNAIAAVSVAGQQQPH-CNILKRDDDGGGKPSTTRRVLLSAVFPCPTADNQ-TGDLSFHS----LFGTGDDAGQGDCEGSSGSPSGRNMEKTQTLLPLASTFADVLNSCGTWLHPEDFERRVLGPTRTLLEMQLEHLSSTTLLGRKNGDEGNSICSTSDVGPDNCRASIGNTAEHQISG-APTRLSSGTNAAAAQAAEAEVALEQEEAESEAFVQEAADEIALLVEDALLVNSEPANASPGGDEIVINVTKNLPPRPENGTDGSSPIEEKSRATG------RHVLLDVLWAASSIPSGG 382
            MDR VIL+AEPAPLL L     +  A  G   A T+             KA  DL+HL+ V++ +S FC       H     SS+ S  G  G     +P+   L+  + A        P      +RDD       + RRVLL+AVFPCP    + TG+ S  +    +  + DD  +             + E ++ LL LA  FA+ L  CG WL P DFE RVL PTR L++ QLE        G+   D    + STS +   + R S     E  +   +P+ L + T   +A AA        E A+ EAF + AADEIA L   A +    PA                L PR   G  G +       ATG      R  +LDVLWAASS P+ G
Sbjct:    1 MDRRVILLAEPAPLLDLRFDRRQHDAGEGGSGARTR-------------KASLDLRHLRSVIEELSRFCHQQQVQGHGQGANSSTGSEEGCGGEGGRGIPKAGLLTQPLKAAEDTPSMGPTTAREPERDDAAASGSRSGRRVLLAAVFPCPDVPLEATGEASTAAAEEPIAASRDDRSEQQXXXXXXXXXXXSRESSR-LLHLALAFAEALEGCGVWLEPADFETRVLAPTRALIDRQLEDFGG----GQPPADV---VDSTSVIR--SSRGSATRAVERPMPLLSPSPLGASTTGPSAGAAV-------EYADKEAFARSAADEIASLTRQATVETVTPAA---------------LLPRRWGGESGGT-------ATGGGHDGRRLCMLDVLWAASSFPAEG 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2913.7945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0B5_ECTSI2.150e-2830.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK10_9PHAE2.940e-2433.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEQ1_9PHAE5.860e-2132.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..1478
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2913contigH-paniculata_contig2913:8015..16057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2913.7945.1mRNA_H-paniculata_contig2913.7945.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2913 7928..16944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2913.7945.1 ID=prot_H-paniculata_contig2913.7945.1|Name=mRNA_H-paniculata_contig2913.7945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1479bp
MDRFVILVAEPAPLLSLYAAAAKAAAAVGHRQAVTKRRHDSRLEPWLIMK
AIQDLQHLKIVVDSMSEFCRHHYSICISSSSSGISGPDSLSLPQNLSNAI
AAVSVAGQQQPHCNILKRDDDGGGKPSTTRRVLLSAVFPCPTADNQTGDL
SFHSLFGTGDDAGQGDCEGSSGSPSGRNMEKTQTLLPLASTFADVLNSCG
TWLHPEDFERRVLGPTRTLLEMQLEHLSSTTLLGRKNGDEGNSICSTSDV
GPDNCRASIGNTAEHQISGAPTRLSSGTNAAAAQAAEAEVALEQEEAESE
AFVQEAADEIALLVEDALLVNSEPANASPGGDEIVINVTKNLPPRPENGT
DGSSPIEEKSRATGRHVLLDVLWAASSIPSGGSDLTDRTRLESSDDRQFG
RSGRSRPPMQLTLSVPVVDRRAAPLKETLRSACSAFSESLVTIWPAAAAV
ASATVAVDKDSDGGCNTVSGDACEAVNLFGQGEPEKSAAIEATETLLCEE
WTAWSRFLGATVFVAPRRINQDTHTLHGMNIDNPVLPGLLWRGSIVPAPT
TILHPRQEFSHASSSSTTAVTAPSPAHHSDTQLQDRDNSNVMPKLSGFAI
RAVADSCDYFSRLGKENYDGEVSKGHSRGRVLMANDSEFAKVARRANTAT
TADAFAWASELRLARVVSPTALARVCHLLTDGALASPLELFVYDPYRFPG
SSSFLEDLGKDGRGMLLVAPESPAPGALSDMAEARNGKGLAMVCFPCPGR
RNSGVDVAVAVGDDTAACETRSAAVWTVTLFRRSSEFSEEAVKALVGDNL
SRFEKTVQAEQGAVVGVEDTDKQNKGSKRSFADILTSVPKYRGNALQREA
AALVRQADGRDTIPIPPPVRRSSRRVAAKTIQQATPGTPSVLESAEGDTE
LAAQIDDEMSMVVANLNAVMDARAAQLRNISRLHNAPAANKIGGDPARFA
TVTAIGSGRGDRGETVAASALYGTFGTWDGDDRVFWAEECLLPFSGSTSV
AVGPTAGTTGVRQERSGADATKNGMGGTSSGGEGKGGTQDGGKTASTSEL
RFASTEAEGRALSTAEEALEKAGRQQRERMKQRKIVAREQRARMDCPRPR
PRSSSGSGSGGGVGCTADVDGVVRRPAGSSSGSSGKGRFLRREGSTSSLT
TGPPPPHGAARSVAASRLSRGSRLLGKSVGVGAAVATPDTAVSLVNSSSS
GGGREAVEAIGGNRRRKAATEQDKVHRSVVRRKAVVTGTAGSVESKGSAS
KPPTPLNPPAGATAARTLSAKRNGTGSAAAAASARVRRAIFQDDDAPDAT
EIERHAPAAAGSLNPRIEAISPSPRVSGSLHESPLLSPVKTAAVTAGGGA
TTVDGGGGGGDGGRGNAESLAARMPSVAGMVKGQAAAEEEREGTDGIGFG
VGFGVGVDGGVFGGGTAGREGARSGVDLSMRELMEHAMLSAIATKMGLPE
NDSRVREVFHRESRRMAGGGGATGGGNI*
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