|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1847 |
| Cds size | 978 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29125.7943.1 >prot_H-paniculata_contig29125.7943.1 ID=prot_H-paniculata_contig29125.7943.1|Name=mRNA_H-paniculata_contig29125.7943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MLEAVRAVRRMAKDTVDEVWHPEWVTPIKAKVMEAIKGESQASIKFHTSV
NTMFNSARRKGEAGMAGPVARRQLIADMATAPLEVDLVQTSTALSSFMVA
EGSYLKDWLQAIKNTVNSLNTLGKAYAPNKDFVVCAVGASLHKQFSGVYD
HLPHVFNRPYDSLDEFWEKFTHLESSITRATSPQTPTASFSALPVSTTQQ
VSQVMPMAGGQTALGRSNHQDYQLDPMELEWLSINAVSASKRARVHLMAT
KDPEKAFLQRKRAGPICLNCSASEHFVMNCPLGFRNTTKLLNAELDENGE
SEKADSKWRRLQERMRKYRAKKQDE* back to topmRNA from alignment at H-paniculata_contig29125:2..1848+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig29125.7943.1 ID=mRNA_H-paniculata_contig29125.7943.1|Name=mRNA_H-paniculata_contig29125.7943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1847bp|location=Sequence derived from alignment at H-paniculata_contig29125:2..1848+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACAGTCGACCAACCAACCGCCGCCGCACTATCCGCCGCCGGCCAGCCAAC
AGCAGTGGACAAACCAACCGCCGCTGCCGAGCTACCCGCCGCCGACCAGT
TACCAAGTTCCTACAAACGACCAGCCTGTGCGAGTGCATAACGCAGCCAT
CGGGGACGCCTACACCAACATCAAGATCCAGAACGTGCCGCGTCTTCCAT
CGTTACCACTGGCGAACCCGAGAAACTTGGAAGGCTTCCAAAATTTGCAC
CAGGCGATGCTGGAGGCTGTACGTGCGGTGCGGCGCATGGCGAAGGACAC
GGTAGACGAGGTATGGCATCCGGAATGGGTGACACCCATTAAGGCGAAAG
TGATGGAAGCGATCAAGGGTGAATCTCAAGCGTCCATTAAATTCCACACC
TCGGTGAACACTATGTTTAATAGCGCACGTCGGAAGGGGGAAGCAGGAAT
GGCAGGACCGGTGGCTCGCCGCCAACTGATCGCTGATATGGCAACGGCGC
CCCTGGAGGTCGATCTGGTCCAAACGTCCACTGCCTTGAGTTCCTTCATG
GTAGCAGAAGGCAGCTATTTGAAAGACTGGTTGCAAGCGATCAAGAATAC
GGTAAATTCGCTGAATACCCTGGGGAAAGCCTACGCCCCTAACAAGGACT
TTGTAGTCTGCGCAGTAGGCGCAAGTTTACACAAACAGTTTTCGGGAGTA
TATGACCACTTACCTCACGTTTTTAATCGCCCGTATGACTCACTAGACGA
GTTCTGGGAGAAGTTCACACATTTGGAGTCAAGTATAACACGAGCCACGT
CGCCCCAAACACCAACTGCTTCATTTTCCGCGCTGCCCGTGTCGACCACG
CAACAAGTAAGTCAGGTCATGCCGATGGCAGGAGGTCAAACTGCCCTTGG
ACGAAGCAACCACCAAGACTACCAGCTGGACCCGATGGAATTAGAGTGGT
TATCCATTAATGCGGTGTCAGCGTCGAAACGGGCGAGAGTGCATCTCATG
GCAACCAAAGACCCAGAGAAGGCGTTCTTACAGAGGAAAAGAGCGGGGCC
AATATGTTTAAACTGTAGTGCGAGCGAACACTTTGTCATGAACTGTCCTT
TGGGTTTCCGAAATACAACGAAACTGTTGAACGCCGAGCTCGACGAAAAT
GGCGAATCAGAGAAAGCAGATTCGAAATGGAGGCGGTTACAAGAACGGAT
GAGAAAGTATAGAGCGAAGAAGCAAGACGAATGAGTAACACTCGGCGTAG
GGAGCCGGCCTACGCCGAAAACAGCTCCGGCACACGGTACTGCGGTTAGA
AAACAATTTCGCACTAATGATAACTGCAGCAGGAAGGTTAACCACGTGCC
TCCCACCGTACCCAATCCTTTGTTTTCTCCTTCGTTTTTCTCTGATGACA
GCACCGTTTGTTCCGTACACAACGAACAGGTGGAACATCAGAAGCCGGTG
CTTCACGAAAAGATGTGTAAACAGCGCGCAGATAGGGGCGATAACAGGCG
TGATATGAACAGATCAGCCTTCGTAGCTCGGCCCAAATTCCGCGCGCCTC
GTCTTACCGTTATTCGTGAATGCAGCGAGGCGAGCCCAGCAGCCGGCGGG
AGTCATGACCCGCAGACAGCTGGCGTTCGGGATGGGAGTCTAGCAACACC
ATCCATAGCAGCAGGCGTCCGTGCCCACGGAAACAAGGCCGCTGTAGGGG
TTTTAGGCACACCCCCGCCGTCTGATCAAACGGCGTCAGTTACAGGTATT
ACCAGGTCCGAGCGAATGGGGGCACCTTCCGTAGTCTCGGTAAAGATAGG
GGAAGCGTCGGCCACGGCGTCGTCTCCAAGTTCACACTGTTCGGGAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig29125:2..1848+ >mRNA_H-paniculata_contig29125.7943.1 ID=mRNA_H-paniculata_contig29125.7943.1|Name=mRNA_H-paniculata_contig29125.7943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at H-paniculata_contig29125:2..1848+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGGAGGCTGTACGTGCGGTGCGGCGCATGGCGAAGGACACGGTAGA
CGAGGTATGGCATCCGGAATGGGTGACACCCATTAAGGCGAAAGTGATGG
AAGCGATCAAGGGTGAATCTCAAGCGTCCATTAAATTCCACACCTCGGTG
AACACTATGTTTAATAGCGCACGTCGGAAGGGGGAAGCAGGAATGGCAGG
ACCGGTGGCTCGCCGCCAACTGATCGCTGATATGGCAACGGCGCCCCTGG
AGGTCGATCTGGTCCAAACGTCCACTGCCTTGAGTTCCTTCATGGTAGCA
GAAGGCAGCTATTTGAAAGACTGGTTGCAAGCGATCAAGAATACGGTAAA
TTCGCTGAATACCCTGGGGAAAGCCTACGCCCCTAACAAGGACTTTGTAG
TCTGCGCAGTAGGCGCAAGTTTACACAAACAGTTTTCGGGAGTATATGAC
CACTTACCTCACGTTTTTAATCGCCCGTATGACTCACTAGACGAGTTCTG
GGAGAAGTTCACACATTTGGAGTCAAGTATAACACGAGCCACGTCGCCCC
AAACACCAACTGCTTCATTTTCCGCGCTGCCCGTGTCGACCACGCAACAA
GTAAGTCAGGTCATGCCGATGGCAGGAGGTCAAACTGCCCTTGGACGAAG
CAACCACCAAGACTACCAGCTGGACCCGATGGAATTAGAGTGGTTATCCA
TTAATGCGGTGTCAGCGTCGAAACGGGCGAGAGTGCATCTCATGGCAACC
AAAGACCCAGAGAAGGCGTTCTTACAGAGGAAAAGAGCGGGGCCAATATG
TTTAAACTGTAGTGCGAGCGAACACTTTGTCATGAACTGTCCTTTGGGTT
TCCGAAATACAACGAAACTGTTGAACGCCGAGCTCGACGAAAATGGCGAA
TCAGAGAAAGCAGATTCGAAATGGAGGCGGTTACAAGAACGGATGAGAAA
GTATAGAGCGAAGAAGCAAGACGAATGAATGCTGGAGGCTGTACGTGCGG
TGCGGCGCATGGCGAAGGACACGGTAGACGAGGTATGGCATCCGGAATGG
GTGACACCCATTAAGGCGAAAGTGATGGAAGCGATCAAGGGTGAATCTCA
AGCGTCCATTAAATTCCACACCTCGGTGAACACTATGTTTAATAGCGCAC
GTCGGAAGGGGGAAGCAGGAATGGCAGGACCGGTGGCTCGCCGCCAACTG
ATCGCTGATATGGCAACGGCGCCCCTGGAGGTCGATCTGGTCCAAACGTC
CACTGCCTTGAGTTCCTTCATGGTAGCAGAAGGCAGCTATTTGAAAGACT
GGTTGCAAGCGATCAAGAATACGGTAAATTCGCTGAATACCCTGGGGAAA
GCCTACGCCCCTAACAAGGACTTTGTAGTCTGCGCAGTAGGCGCAAGTTT
ACACAAACAGTTTTCGGGAGTATATGACCACTTACCTCACGTTTTTAATC
GCCCGTATGACTCACTAGACGAGTTCTGGGAGAAGTTCACACATTTGGAG
TCAAGTATAACACGAGCCACGTCGCCCCAAACACCAACTGCTTCATTTTC
CGCGCTGCCCGTGTCGACCACGCAACAAGTAAGTCAGGTCATGCCGATGG
CAGGAGGTCAAACTGCCCTTGGACGAAGCAACCACCAAGACTACCAGCTG
GACCCGATGGAATTAGAGTGGTTATCCATTAATGCGGTGTCAGCGTCGAA
ACGGGCGAGAGTGCATCTCATGGCAACCAAAGACCCAGAGAAGGCGTTCT
TACAGAGGAAAAGAGCGGGGCCAATATGTTTAAACTGTAGTGCGAGCGAA
CACTTTGTCATGAACTGTCCTTTGGGTTTCCGAAATACAACGAAACTGTT
GAACGCCGAGCTCGACGAAAATGGCGAATCAGAGAAAGCAGATTCGAAAT
GGAGGCGGTTACAAGAACGGATGAGAAAGTATAGAGCGAAGAAGCAAGAC
GAATGA back to top
|