mRNA_H-paniculata_contig2911.7940.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: A0A6H5L9A2_9PHAE (Fe-ADH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9A2_9PHAE) HSP 1 Score: 357 bits (916), Expect = 4.600e-118 Identity = 196/331 (59.21%), Postives = 234/331 (70.69%), Query Frame = 1
Query: 79 PEVVVERGCSWSKA-SFVANHGRTCLAVVGHGDRALDQAQ-RSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLLCRHDYSSVCAAVFPHVVRDMVEQAESFSGDAEVSEAINR 1065
P+++VE CSW+K + V+ HGRTCLA+ D QA R LFELRK GINCA+FT RGAYPTA+GIDEAR MARR+GA I+ G GG +DTAKA A+LH +S CK FL SPG V+MGE HSKP+ P G+ALPL+ +P+SAGAG AN RCLVWHP+DEVLVP+ + +S +VALVD LC LS QT AMALTALS CVDA++A EL S P + L +LG RGI V GLP L +GK+ ARE+L S+ AGQL TPAP TQ++ RA GSLL RH Y SVCA VFPHVV DM+ QA SFSGDA+ +EAI R
Sbjct: 20 PKLIVEADCSWTKVVAQVSRHGRTCLAIAD--DNTPGQAVGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEDGHSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAE---EGESLTVALVDPILCTSLSKSQTAAMALTALSACVDALLARELALASGTPLQNGDALLDLGRRGIDAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQANSFSGDAQAAEAIER 345
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: A0A836CAW8_9STRA (Iron-containing alcohol dehydrogenase-domain containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW8_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.560e-49 Identity = 127/328 (38.72%), Postives = 168/328 (51.22%), Query Frame = 1
Query: 82 EVVVERGCSWSK-ASFVANHGRTCLAVVGHGDRALDQAQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGE-GTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSS---SVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENG---KDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLLCRHDYSSVCAAVFPHVVRDMVEQAESFSGDA 1041
+V +E CSW +A G L V G +RA AQR LFE+RK G++C +T + YPTA GIDE +MA+R+GAMS++G G GG VDTAKA A L T KC+ FL+SP ++G GT + A+P + VPS G + V HPED +LVPM +R S VALVD L L ++MA+ AL+ CVDA++ + R + L GI + GLP D R L AS+ AG T AP Q + AAGSLL YS + A++FPH + + E AE + DA
Sbjct: 50 DVTLEDDCSWKAIGDCIAGLGGKGLVVHGGSNRAQASAQRILFEIRKAGVDCTTYTVKDLYPTAPGIDEGLSMAKRIGAMSVVGLGRGGVVDTAKAIAALVGTKGKCQHFLESPSDGVLGSSGTSQSKAAYSAAAIPCVAVPSGIGVSAATSPSVHVLHPEDGLLVPM-----KRHHSLVPRVALVDPLLTASLRETTALSMAVAALAACVDALLVATRAADQDAEASRRQALA---LEGIRAIATGLPAAAAAATALNDSAQRLELVRASIAAGTAVGATAAPPMQTIAMAAGSLLPLTPYSELVASLFPHFLSEFTE-AEDEAADA 368
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: A0A7X7EA10_9ACTN (Iron-containing alcohol dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X7EA10_9ACTN) HSP 1 Score: 82.0 bits (201), Expect = 1.040e-13 Identity = 85/288 (29.51%), Postives = 128/288 (44.44%), Query Frame = 1
Query: 139 GRTCLAVVGHGDRALDQAQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELD-FTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLLCRHDYSSVCAAVFPHVV 999
G+ L V G R D+AQ L LR+ G+ F G P E I A+AR S++GFG G +DTAKA A L D+L+ G G + ++P VP + +P++AG G ++ E + V + + + + VALVD E+ LS E T + AL+ ++A + + + T L E GI V L R +E+G + ARE +A ASL+ G A + G ++ + +VCAA+ P VV
Sbjct: 15 GKRALLVTG---RNQDRAQTLLALLREHGLETVEFAVVGE-PDLETIRTGTALARAEWCDSVVGFGGGSVIDTAKAVAALITNQGDIMDYLEIIG----GGKSLAEPPVP------FVAIPTTAGTGSEVTCNSVITSREHRIKVSLRS---RSMLAKVALVDPEVTYTLSPEVTATTGIDALTQLIEAYVCNRANPVTDGLCQE-----------GISRVARSLRRAVEDGDNAAAREDMAVASLFGGLALVNAGLGAVHGIAGPLGGMVTA-PHGAVCAALLPEVV 273
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: UPI001162CE9B (iron-containing alcohol dehydrogenase n=1 Tax=Streptomyces sp. S1A1-7 TaxID=2594459 RepID=UPI001162CE9B) HSP 1 Score: 79.3 bits (194), Expect = 9.460e-13 Identity = 79/284 (27.82%), Postives = 123/284 (43.31%), Query Frame = 1
Query: 190 AQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLL-CRHDYSSVCAAVFPHVVRDMVEQAESFSGD 1038
AQR + LR G+ +F PT + + E + R GA S++GFG G +DTAKA L + +D+ P++ G ALP+I VP++AG+G A + ++ D PG A+VD EL + T T + AL+ V+A ++ + + P L + T +G L R+ +G+D+EARE + A+ AG + ++R G+ H S+ A +FP V V AES D
Sbjct: 47 AQRLMETLRDAGLQPRLFAGTVPDPTTDSLGEGLTVLREHGADSVIGFGGGSPMDTAKALGLLGVQGGQMRDY--------------KAPRINLGPALPVIAVPTTAGSGSEATQFTVI---TDSATDEKMLCPGPAFLPVAAVVDFELTLSMPTRLTADTGVDALTHAVEAYVSRKAN-----PFSDGFALHAIRT-----IGQHLRRVYADGEDVEAREAMMLAATQAGIAFSNSSVALVHGMSRPIGAHFHVAHGLSN--AMLFPEVTAFSVHAAESRYAD 301
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: A0A494X324_9FIRM (Iron-containing alcohol dehydrogenase n=1 Tax=Desulfofundulus salinum TaxID=2419843 RepID=A0A494X324_9FIRM) HSP 1 Score: 78.2 bits (191), Expect = 2.240e-12 Identity = 84/311 (27.01%), Postives = 128/311 (41.16%), Query Frame = 1
Query: 79 PEVVVERGCSWSKASFVANHGRTCLAVVGHGDRALDQA---QRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIAS-ELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLLCRHDYSSVCAAVFPHVV 999
P V RGC G L V G L Q+ R L L + G++ ++ P + +EAR + R G ++G G G A+DTAK+ A L + ++L K G ALP + VP++AG G A + P +V T+ G++ ++ LVD EL T + AL+ ++++ + T SL + ++L+ LPR +ENG+D+EARE LA SL AG L G C+ + VCA + P V+
Sbjct: 9 PLVRFGRGCITELGKETKRLGNRALLVTGRS--FLKQSGILDRLLGILEEAGVSTVIYDGVSPEPLVDMAEEARELLYREGCNVVIGAGGGSALDTAKSVAALAGAPGRVAEYLNG--------------KRIDGAALPWVAVPTTAGTGSEATPTAVFTDPARDVK---TSMRGRQFMAAAVLVDPELTLTAPPHITAHSGMDALTQAIESLTSRFATPLTKSLSLQAAELIISC-----------LPRAVENGQDIEARENLALGSLMAGIALANARLGVVHGLAHPVGHR-CQRAHGLVCAVLLPPVM 288
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: A0A3M6VPP3_9STRA (Fe-ADH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPP3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.720e-11 Identity = 85/332 (25.60%), Postives = 140/332 (42.17%), Query Frame = 1
Query: 76 GPEVVVERGCSWSKASFVANHGRTCLAVVGHGDRALDQAQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTG--DALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGK-DMEA---REMLASASLYAGQLCDITPAPATQVLTRAAGSLLCRHDYSSVCAAVFPHVVRDMVEQAESFSGDAEVSE 1053
G +V E+ + S+AS + L V A + Q F L + GI+C +T T +G+D A AMA+RVGA I+GFG G +D A+A A + DF+ + + + K+ G +PL++VP+ G+G +R ++ +D+ + A G+ ++D L + TV ALTAL C+++ + D +L G + V L L+ GK D++ RE A SL +G + + + Q L + G + ++ V A P V E G++ E
Sbjct: 44 GAKVAAEQLGALSRASGM----HKVLVVRDRDAAAASRTQFVEFLLMQAGISCFQYTLERDCATLDGVDHAAAMAQRVGADGIVGFGGGNTMDMARAVAVVLANDGSAVDFVVDRSE----DSENDEVKLQQGKLQTVPLLLVPTIVGSGAEMAKRTMLL--DDDAETKLLFAAGRDIVPEAVIIDPTLMLTVPLHLTVQGALTALGQCLESYLLGGADDALALEGMEA-------------VAKALAAPLKEGKLDLKGAILREQFALGSLLSGIAANSSGTGSAQALAVSMGGIS-DLPHAQVATAFLPFVFDRYAELLNENEGESSFDE 351
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: A0A401MX49_9ACTN (Alcohol dehydrogenase n=13 Tax=Streptomyces TaxID=1883 RepID=A0A401MX49_9ACTN) HSP 1 Score: 73.6 bits (179), Expect = 8.160e-11 Identity = 79/284 (27.82%), Postives = 120/284 (42.25%), Query Frame = 1
Query: 190 AQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLL-CRHDYSSVCAAVFPHVVRDMVEQAESFSGD 1038
A+R + LR G+ +F PT + +D + R GA S++GFG G +DTAKA L + D+ K+P T + G ALPLI VP++AG+G A + ++ D PG A+VD EL + + T + AL+ V+A ++ + + S L I +G L R+ +G D EARE + A+ AG + ++R G+ H S+ A +FP V AES D
Sbjct: 47 AERLMATLRDAGLQPRLFAGTVPDPTTDSLDAGLTVLREHGADSVIGFGGGSPMDTAKALGLLGVQGGRMGDY-KAPHTNL-------------GPALPLIAVPTTAGSGSEATQFTII---TDSATDEKMLCPGPAFLPVAAVVDFELTLSMPSRLTADTGVDALTHAVEAYVSRKANPFSD----------GLALNAIRTIGHHLRRVYADGGDREAREAMMLAATQAGIAFSNSSVALVHGMSRPIGAHFHVAHGLSN--AMLFPAVTAFSAPAAESRYAD 301
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: A0A2W4RZR6_9BACT (Alcohol dehydrogenase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W4RZR6_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 1.080e-10 Identity = 75/311 (24.12%), Postives = 132/311 (42.44%), Query Frame = 1
Query: 85 VVVERGCSWSKASFVANHGRTCLAVVGHGDRALDQAQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTH-SKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLLCRHDYSSVCAAVFPHVVRDMVE 1014
++V RG + + A G V G + + SL R + A++ G P E I A GA ++ G G +DTAKA A L D+L+ ++G G ++P ALP++ VP++AG G ++ E V + + VA+VD EL + + + + L AL+ ++ +++ + + L GI LPR++ +G+D++ARE +A A+L++G + A G + + ++CAA+ PHV+ V+
Sbjct: 10 IIVGRGAAREAGAAAAACGSRVFLVTGRTPARAEPVRASLDAAR---LPVAIWPTAGE-PCLEDITRGAAALADAGADVVVAVGGGSVIDTAKAVAALAANGGDLLDYLE-----VIGAGRPLNRP------ALPVVAVPTTAGTGSEVTRNAVLGSREHGVKASLRSV---HMLPRVAIVDPELTVDVPPDVSASTGLDALTQLIEGYVSARA----------TPMTDALAAAGIPRAAAALPRVVRDGRDLDAREDMAIAALWSGMVLANGGLGAVHGFAGPIGGMT-GAAHGAICAALLPHVMAANVD 291
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: UPI00048224F6 (iron-containing alcohol dehydrogenase n=1 Tax=Rhizobium leguminosarum TaxID=384 RepID=UPI00048224F6) HSP 1 Score: 73.2 bits (178), Expect = 1.120e-10 Identity = 86/332 (25.90%), Postives = 140/332 (42.17%), Query Frame = 1
Query: 70 HGGPEVVVERGCSWSKASFVANHGRT-CLAVVGHGDRALDQAQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLL-CRHDYSSVCAAVFPHVVRDMVEQAESFSGDAEVSEAI 1059
H ++ G S AS + ++ L V G RA +++ E+ + GI VF A P I+ A + R G ++L G G A+D+AK A L T DK D G + TGD LPL++VP++AG G +V P +E A R A++D L LS T + A++ ++A +TS + ++ + +L + + + + ++ +G D++AR + S+ AG +P A L G +L H S A V P+V+ AE+ AE+S+ I
Sbjct: 7 HTPSNILFGAGASSRIASLLKDYKAAHVLLVTDKGVRAAGLTRKAEAEIAEAGIALTVFDGVVADPPWHVIEAATEICRERGCDAVLSIGGGSALDSAKLVAYLVKTPDKLDDIY----------GVD----LATGDRLPLLLVPTTAGTGSEVTPISIVKTPNNE----KKAVVSSRLIPDWAVLDPVLTLGLSPRNTAETGIDAMAHAIEA-------YTSKI--RKNPISDQLALKALALLSANIRKVYADGSDLQARSEMLLGSMLAGMAFANSPVAAVHALAYPIGGILDVAHGLS--IALVLPYVLEFNRPAAEALY--AELSDVI 307
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Match: UPI001441D660 (iron-containing alcohol dehydrogenase n=3 Tax=Rhizobium leguminosarum TaxID=384 RepID=UPI001441D660) HSP 1 Score: 73.2 bits (178), Expect = 1.140e-10 Identity = 89/331 (26.89%), Postives = 140/331 (42.30%), Query Frame = 1
Query: 73 GGPEVVVERGCSWSKASFVANHGRT-CLAVVGHGDRALDQAQRSLFELRKIGINCAVFTARGAYPTAEGIDEARAMARRVGAMSILGFGVGGAVDTAKATAKLHFTSDKCKDFLKSPGTVMMGEGTHSKPKVPTGDALPLIMVPSSAGAGPWANERCLVWHPEDEVLVPMTAAPGQRKSSSVALVDAELCQHLSTEQTVAMALTALSVCVDAIIASELDFTSSLPGERSKLLRELGTRGIGEVGVGLPRILENGKDMEAREMLASASLYAGQLCDITPAPATQVLTRAAGSLL-CRHDYSSVCAAVFPHVVRDMVEQAESFSGDAEVSEAI 1059
G P ++ E G S + + L V G RA +++ + + GI V + A PT+ I+ A R G ++L G G A+DTAK A L K+PG + G TGD LPL++VP++AG G +V P +E A R A++D EL L + T A T + V AI A +T + +++ + + + + + L ++ +G D+EAR + S+ AG +P A L G++ H S+ A V P+V+ AE+ AE+SE I
Sbjct: 8 GSPNILFEAGASNKIGELLKGYKAAHVLLVTGKKVRAAGLTRKAEAAIAEAGIALTVSEDKVAEPTSHVIEAAAETCRECGVDAVLSIGGGSAMDTAKLVAYL----------AKNPGKLDDIYGIDRA----TGDRLPLLLVPTTAGTGSEVTPISIVKTPNNE----KKAVISPRLIPDCAILDPELTLGLPPDLT---AQTGIDAVVHAIEA----YTGKI--KKNPISDQFALKALALLTANLRKVYTDGSDLEARSEMLLGSMLAGMAFANSPVAAVHALAYPIGAIFNVGHGLSN--ALVLPYVLEFNRPAAEALY--AELSEVI 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2911.7940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2911.7940.1 >prot_H-paniculata_contig2911.7940.1 ID=prot_H-paniculata_contig2911.7940.1|Name=mRNA_H-paniculata_contig2911.7940.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp MRRGLSPLTARFSSAAATSSSLIHGGPEVVVERGCSWSKASFVANHGRTCback to top mRNA from alignment at H-paniculata_contig2911:5588..8648- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2911.7940.1 ID=mRNA_H-paniculata_contig2911.7940.1|Name=mRNA_H-paniculata_contig2911.7940.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3061bp|location=Sequence derived from alignment at H-paniculata_contig2911:5588..8648- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2911:5588..8648- >mRNA_H-paniculata_contig2911.7940.1 ID=mRNA_H-paniculata_contig2911.7940.1|Name=mRNA_H-paniculata_contig2911.7940.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig2911:5588..8648- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |