prot_H-paniculata_contig29101.7939.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29101.7939.1
Unique Nameprot_H-paniculata_contig29101.7939.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length154
Homology
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BLAST of mRNA_H-paniculata_contig29101.7939.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 8.340e-9
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:    1 NGQVVWDGLIAKFQKNPKQRHRILMRQLDGMTMKQDQDPDIISAHVYRLRDELAHMGVEISEERLTDIVLEGLTDYY 77
            +G  VW  L +KFQ   + R R L R+L+  TM+   DPDI   HV+ L ++L  +G  +++E+L DI+L+GL   Y
Sbjct:  231 SGLAVWKELESKFQPADEHRRRNLERELESATMRTGTDPDIFITHVWHLAEQLRFIGGTVTDEKLGDIILQGLPAEY 307
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BLAST of mRNA_H-paniculata_contig29101.7939.1 vs. uniprot
Match: Q6XMP8_AEDAL (AgCP7521-like protein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=Q6XMP8_AEDAL)

HSP 1 Score: 53.1 bits (126), Expect = 3.060e-5
Identity = 39/154 (25.32%), Postives = 69/154 (44.81%), Query Frame = 0 
Query:    3 QVVWDGLIAKFQKNPKQRHRILMRQLDGMTMKQDQDPDIISAHVYRLRD---ELAHMGVEISEERLTDIVLEGLTDYYDQIKYIAERDPDFSIDEIEVTTRNMCANCAAREGSSRKSRGRKSAVVVTTSTSKSSNFNGKCHSCGRIGHVMRDCR 153
            + +W  L   F K    R  ++ +Q+  + +K   D   + AH+ +  D   +L   G ++ E  +   +   L + YD +    E  P+  +    + TR +       E S   + G K A  V  +    + FNGKCH+CG+ GH+ +DC+
Sbjct:   85 KAMWKSLEDTFAKKSAGRQTLIRKQIARLHLK---DGASVRAHLLQFEDLIRQLRMAGSKLEESDVCSSLALTLPESYDALVTALENLPENELTYEVMKTRLIDEESKRNERSY--TVGDKPAAFVGENQKNGNRFNGKCHACGKRGHMKKDCK 233
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29101.7939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE8.340e-940.26Integrase catalytic domain-containing protein n=1 ... [more]
Q6XMP8_AEDAL3.060e-525.32AgCP7521-like protein (Fragment) n=1 Tax=Aedes alb... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 138..154
e-value: 0.0029
score: 26.9
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 137..153
e-value: 8.3E-5
score: 22.5
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 138..154
score: 9.867
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 4..94
e-value: 7.1E-10
score: 38.7
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 132..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29101contigH-paniculata_contig29101:2497..2958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29101.7939.1mRNA_H-paniculata_contig29101.7939.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29101 2497..2958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29101.7939.1 ID=prot_H-paniculata_contig29101.7939.1|Name=mRNA_H-paniculata_contig29101.7939.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
NGQVVWDGLIAKFQKNPKQRHRILMRQLDGMTMKQDQDPDIISAHVYRLR
DELAHMGVEISEERLTDIVLEGLTDYYDQIKYIAERDPDFSIDEIEVTTR
NMCANCAAREGSSRKSRGRKSAVVVTTSTSKSSNFNGKCHSCGRIGHVMR
DCRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf