prot_H-paniculata_contig29089.7930.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig29089.7930.1
Unique Name	prot_H-paniculata_contig29089.7930.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	97

Homology

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BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.010e-59
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.010e-59
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 186 bits (472), Expect = 1.430e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.030e-59
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   30 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125

[Close]

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: B7FX68_PHATC (Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FX68_PHATC)

HSP 1 Score: 185 bits (470), Expect = 2.890e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQG+TLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 103

[Close]

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: C1MUM2_MICPC (Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 185 bits (470), Expect = 2.890e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: A0A067CU13_SAPPC (Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU13_SAPPC)

HSP 1 Score: 185 bits (470), Expect = 2.890e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI+DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIKDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: A0A812V1L2_SYMMI (Histone H4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A812V1L2_SYMMI)

HSP 1 Score: 185 bits (470), Expect = 2.890e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: A0A835ZF66_9STRA (Histone H4 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF66_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.890e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Match: A0A7S3RVL2_9SPIT (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 185 bits (470), Expect = 2.980e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 96
            GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig29089.7930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A024G0M5_9STRA	1.010e-59	100.00	Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI...	[more]
F0W2L9_9STRA	1.010e-59	100.00	Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID...	[more]
H4_SOLLC	1.430e-59	98.96	Histone H4 n=13 Tax=cellular organisms TaxID=13156...	[more]
A0A3L6V663_9STRA	2.030e-59	100.00	Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID...	[more]
B7FX68_PHATC	2.890e-59	98.96	Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 Rep...	[more]
C1MUM2_MICPC	2.890e-59	98.96	Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1M...	[more]
A0A067CU13_SAPPC	2.890e-59	98.96	Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepI...	[more]
A0A812V1L2_SYMMI	2.890e-59	98.96	Histone H4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8...	[more]
A0A835ZF66_9STRA	2.890e-59	98.96	Histone H4 n=2 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A7S3RVL2_9SPIT	2.980e-59	98.96	Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 82..93 score: 97.79 coord: 33..53 score: 93.56 coord: 1..3 score: 24.75 coord: 70..82 score: 90.05 coord: 13..32 score: 93.38 coord: 55..69 score: 91.96
IPR001951	Histone H4	SMART	SM00417	h44	coord: 9..83 e-value: 1.8E-29 score: 113.9
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 28..89 e-value: 1.7E-8 score: 34.6
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..96 e-value: 1.9E-57 score: 193.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 1..95
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..96
None	No IPR available	PANTHER	PTHR10484:SF171		coord: 1..96
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 8..12

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig29089	contig	H-paniculata_contig29089:452..742 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig29089.7930.1	mRNA_H-paniculata_contig29089.7930.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig29089 452..742 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig29089.7930.1 ID=prot_H-paniculata_contig29089.7930.1|Name=mRNA_H-paniculata_contig29089.7930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG
VLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR035425	CENP-T/H4_C
IPR009072	Histone-fold
IPR019809	Histone_H4_CS