mRNA_H-paniculata_contig29086.7929.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A6H5KTB3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB3_9PHAE) HSP 1 Score: 121 bits (303), Expect = 3.770e-30 Identity = 67/81 (82.72%), Postives = 77/81 (95.06%), Query Frame = 1
Query: 7 RALRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVSV 249
RALR+LSRKVTV EVNEAVMARR+AS+KEQLQVE+EARA +ERDFL++S+A K RILYLEQWKAGA+ARLLRLQQRL+VSV
Sbjct: 653 RALRDLSRKVTVLEVNEAVMARRFASVKEQLQVEAEARAVSERDFLDMSTAGKTRILYLEQWKAGASARLLRLQQRLDVSV 733
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: D8LI68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI68_ECTSI) HSP 1 Score: 120 bits (301), Expect = 6.980e-30 Identity = 66/81 (81.48%), Postives = 77/81 (95.06%), Query Frame = 1
Query: 7 RALRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVSV 249
RALR+LSRKV+V EVNEAVMARR+ S+KEQLQVE+EARAA+ERDFLE+S+A K R+LYLEQWKAGA+ARLLRLQQRL+VSV
Sbjct: 1023 RALRDLSRKVSVLEVNEAVMARRFTSVKEQLQVEAEARAASERDFLEMSTAGKTRVLYLEQWKAGASARLLRLQQRLDVSV 1103
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A835Z5T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5T3_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 7.060e-15 Identity = 45/80 (56.25%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 7 RALRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVS 246
R LREL+R+VTV+EVNE +ARR+A+++EQL++ +EAR AE D +E +A+K RIL+LEQ +AGAA R+ RL LE S
Sbjct: 225 RLLRELTRRVTVFEVNEQELARRHANMEEQLRLANEARERAEGDLIEAEAAAKTRILFLEQHRAGAAERVARLTAELERS 304
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A812W2G3_SYMMI (Cep290 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W2G3_SYMMI) HSP 1 Score: 69.3 bits (168), Expect = 1.220e-12 Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 13 LRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVSV 249
++E +RKVTVYEVNEAV++R++ +L EQ+ E RA E DF+E+ K RIL+LEQ+KA + RL +L+ L+ SV
Sbjct: 82 IKEYTRKVTVYEVNEAVLSRKFMALSEQMAEEQSLRARVEADFVEMEGTLKRRILFLEQYKAICSPRLDKLETELQYSV 160
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A482STS1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STS1_9ARCH) HSP 1 Score: 64.7 bits (156), Expect = 2.780e-10 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 19 ELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLE 240
EL+RKVT+YE NEA+++R+Y SL EQ E + R E DF E+ + K RIL+LEQ+K A RL +Q +L+
Sbjct: 688 ELTRKVTIYESNEAILSRKYISLSEQCDTEVKRRVQLEWDFAEMEATLKQRILFLEQYKLAAGGRLAFVQGKLD 761
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A7R9U7L5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7L5_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.300e-8 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 13 LRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVS 246
L+E +R+ T+ EVNEAV+ARRY SL+ QL E + R AE + E + + RILYLEQWKA A + RLE S
Sbjct: 209 LKEQTRRCTILEVNEAVLARRYRSLESQLAQEKQRRKEAETELKEATIIWRHRILYLEQWKARAVGEIEVYVARLERS 286
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A7S1TUX8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUX8_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.120e-8 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 1 LRRALRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVS 246
L++ L+E +RK T+ EVNEAV+ARRY SL+ QL E+ R +E+ E + + RILYLEQWKA A + RLE S
Sbjct: 664 LQKNLKEQTRKCTLLEVNEAVLARRYRSLEAQLAQEAVRRRESEKALKEATVLWRHRILYLEQWKARAVGEMEVYAARLERS 745
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A3R7G134_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G134_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.080e-7 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 LRRALRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVSV 249
LR + EL+RK+ VYEVNEA + R+Y L + + +E +R++ E+ K R+LYLE WK GA + R+++ LE SV
Sbjct: 748 LRSNVIELTRKIAVYEVNEARLKRKYQQLHNEWRSSTEHNKLLQREWSEMEKTLKYRVLYLETWKQGADEMMERMEKTLEKSV 830
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A3F2RLU5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLU5_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.000e-7 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 LRRALRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVSV 249
LR + EL+RK+ VYEVNEA + R+Y L + + +E +R++ E+ K R+LYLE WK GA + R+++ LE SV
Sbjct: 14 LRSDVIELTRKIAVYEVNEARLKRKYQQLHNEWRSSTEHNKLLQREWGEMEKTLKYRVLYLETWKQGADEMMERMEKTLEKSV 96
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Match: A0A485LPE4_9STRA (Aste57867_24043 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPE4_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 5.130e-7 Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 19 ELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEISSASKMRILYLEQWKAGAAARLLRLQQRLEVSV 249
+ +RK+ ++EVN+A +AR+Y + ++ Q E R A E + L++ A K RI YLE WK GA R+ +QQ L S+
Sbjct: 486 DTTRKLALFEVNQARLARQYNVMMDEKQTEYTRRIAIEDELLDVEKALKGRIQYLESWKQGATRRIKSMQQALHQSI 562 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29086.7929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29086.7929.1 >prot_H-paniculata_contig29086.7929.1 ID=prot_H-paniculata_contig29086.7929.1|Name=mRNA_H-paniculata_contig29086.7929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp LRRALRELSRKVTVYEVNEAVMARRYASLKEQLQVESEARAAAERDFLEIback to top mRNA from alignment at H-paniculata_contig29086:1541..2302- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig29086.7929.1 ID=mRNA_H-paniculata_contig29086.7929.1|Name=mRNA_H-paniculata_contig29086.7929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=762bp|location=Sequence derived from alignment at H-paniculata_contig29086:1541..2302- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig29086:1541..2302- >mRNA_H-paniculata_contig29086.7929.1 ID=mRNA_H-paniculata_contig29086.7929.1|Name=mRNA_H-paniculata_contig29086.7929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at H-paniculata_contig29086:1541..2302- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |