prot_H-paniculata_contig29074.7927.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29074.7927.1
Unique Nameprot_H-paniculata_contig29074.7927.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length312
Homology
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 6.140e-77
Identity = 166/459 (36.17%), Postives = 213/459 (46.41%), Query Frame = 0
Query:    1 CDKIYSGTGVKHDPERIRCLVEMRRPESVGDLMRFLQAVNWMRIALPALEPTIAPLRELMEIHMRGT-SRTKRVAVRKIITAEEWTGKRRAAWGDVRDRLVKAAALHHRKDGWSVLMFSDASDLFWGSFLTQVPTAQL------------------------------------------------------------------------------------------------------------------------------------------PGKDVVQDGQDAT-------AQGQPTVVTKVGDAMRGADGLYRVTLRGVPVLWTPRNEHALQARLMVCAHMQKAGHRGVDATINRLSAYCVWDGMEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRG-GCPYLLVLLDDVSSYVWLEPALECTA 312
            C K+YS   V+HDPER+  L  MRRPE+ G+LM+FLQAVNW+R +LP +   + PLR  +E H+ G  SRTKRVA  + I A+  T     AW   +D + +A AL H   G +VLMF DASD  WGSFLTQVP  QL                                                                                                                                          P K VV+D Q A        A    +  T VG A   A+GL+RV + G  VLW P    ALQ RLMVCAHM++AGHRG  AT+ RLS YC W  ME +V +F+++CLHC+DS++G  VPRPLGE +HGT  GEV+HFD+L++GAS PL +  +    G  Y+LV++DD+S++VWLEP   CTA
Sbjct:  956 CGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRWVSVPSVSVRAAAVYAPSEPDAAMPSKQVVRDAQQAARSKLGALAGPASSFSTAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTA 1414          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 7.490e-72
Identity = 151/455 (33.19%), Postives = 208/455 (45.71%), Query Frame = 0
Query:    1 CDKIYSGTGVKHDPERIRCLVEMRRPESVGDLMRFLQAVNWMRIALPALEPTIAPLRELMEIHMRGT-SRTKRVAVRKIITAEEWTGKRRAAWGDVRDRLVKAAALHHRKDGWSVLMFSDASDLFWGSFLTQVPTAQLPGKDVVQD----------------------------------------------------------------------------------------------------------------------------------GQDATAQGQPTVVTKVGDAMR-----------GADGLYRVTLRGVPVLWTPRNEHALQARLMVCAHMQKAGHRGVDATINRLSAYCVWDGMEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRG-GCPYLLVLLDDVSSYVWLEPALECTA 312
            C K+YS   ++HD +R+  L  +RRPE+ G+LM+FLQAVNW+R +LP +   +APLRE +E+HM G  +RTKRVA  + I  + WT     +W   +D +  A  L+H   G +VLMF DASD  WGSF+TQVP +++     V+D                                                                                                                                   ++A  + Q TV   VGD                +GL+RV + G  VLW P     +Q RLM+CAHM++AGHRGV AT++RL  YC W  M+ +V EF+++CLHC+DS+SG  VPRP GE +HG   GEVLHFD+LH+G S PL    +    G  YLLV++DD+S++ W+EP   CTA
Sbjct:  858 CGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTA 1312          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.000e-59
Identity = 134/422 (31.75%), Postives = 183/422 (43.36%), Query Frame = 0
Query:   34 RFLQAVNWMRIALPALEPTIAPLRELMEIHMRGT-SRTKRVAVRKIITAEEWTGKRRAAWGDVRDRLVKAAALHHRKDGWSVLMFSDASDLFWGSFLTQVPTAQLPGKDVVQD----------------------------------------------------------------------------------------------------------------------------------GQDATAQGQPTVVTKVGDAMR-----------GADGLYRVTLRGVPVLWTPRNEHALQARLMVCAHMQKAGHRGVDATINRLSAYCVWDGMEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRG-GCPYLLVLLDDVSSYVWLEPALECTA 312
            R + AVNW+R +LP +   +APLRE +E+HM G  +RTKRVA  + I  + WT     +W   +D +  A  L+H   G +VLMF DASD  WGSF+TQVP +++     V+D                                                                                                                                   ++A  + Q TV   VGD                +GL+RV + G  VLW P     +Q RLM+CAHM++AGHRGV AT++RL  YC W  M+ +V EF+++CLHC+DS+SG  VPRP GE +HG   GEVLHFD+LH+G S PL    +    G  YLLV++DD+S++ W+EP   CTA
Sbjct:  115 RRISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTA 536          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 4.490e-44
Identity = 97/253 (38.34%), Postives = 134/253 (52.96%), Query Frame = 0
Query:    1 CDKIYSGTGVKHDPERIRCLVEMRRPESVGDLMRFLQAVNWMRIALPALEPTIAPLRELMEIHMRGTSR-TKRVAVRKIITAEEWTGKRRAAWGDVRDRLVKAAALHHRKDGWSVLMFSDASDLFWGSFLTQVPTAQL------------------------------------PGKDVVQDGQDAT-------AQGQPTVVTKVGDAMRGADGLYRVTLRGVPVLWTPRNEHALQARLMVCAHMQKAGHRGV 209
            C K+YSG  V  DPER++ L +MRRPE+ G LM+FLQAV W+R +L  L   + P+R L+E++M    R TK +A  + I  E WT     AW   +D +  A AL H KDG++VLMF DAS+  WGSFLTQVP  +L                                    P K+V++  Q +        A G    +   G A++  +G++R+ ++G  V+W P +   L+ RLMVCAHMQ AGHR V
Sbjct:  609 CGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHWGSFLTQVPQEELERGVSVEHMTHEPLAFLSVKVRAVAGFAPSKPDDTMPSKEVIRRVQHSAREQVRPRAHGAEVFMAPHGKAVKDGEGIFRIKVKGRVVMWIPEDAKELKQRLMVCAHMQGAGHRDV 861          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 6.000e-28
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 0
Query:    1 CDKIYSGTGVKHDPERIRCLVEMRRPESVGDLMRFLQAVNWMRIALPALEPTIAPLRELMEIHMRGTSR-TKRVAVRKIITAEEWTGKRRAAWGDVRDRLVKAAALHHRKDGWSVLMFSDAS 121
            C K+YSG  V HDP R++ L +MRRPE+ G+LM+ LQAVNW+R +LP L   + PLR L+E HM    R TKR+A  + I +E WT     AW   +D +  A AL H K+G++VLMF DAS
Sbjct:  784 CGKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWTAGMAKAWTSAQDLVAHAVALSHPKEGFAVLMFPDAS 905          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: R7Q542_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q542_CHOCR)

HSP 1 Score: 115 bits (287), Expect = 7.960e-25
Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 0
Query:  168 ADGLY-----RVTLRGVPVLWTPRNEHALQARLMVCAHMQKAGHRGVDATINRLSAYCVWDGMEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRGGCPYLLVLLDDVSSYVWLEPALECTA 312
            ADGL      +V  RG+ + W P+ +  LQ  +MVC+H    GHRG+DAT + +     W  ++ +V   +R C HC+ +R+G  VPRPLG  +HG    EV+H DFL++G     K+         YLL+L DD+SSY+WL P  + TA
Sbjct:  258 ADGLKFDESEKVWKRGMQI-WIPQQDLELQLSIMVCSHCGSIGHRGMDATGSVIRENFWWSSLDQDVKALVRGCYHCIVTRTGEVVPRPLGHAIHGDRPNEVVHMDFLYMGQGLSNKK---------YLLILRDDLSSYIWLWPTEDTTA 397          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A2P4WY00_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WY00_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.130e-23
Identity = 52/131 (39.69%), Postives = 74/131 (56.49%), Query Frame = 0
Query:  182 LWTPRNEHALQARLMVCAHMQKAGHRGVDATINRLSAYCVWDGMEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRGGCPYLLVLLDDVSSYVWLEPALECTA 312
            +W P    +LQ R+ +  H   AGHRG+D T+  +S    W  +  +V  F+RRCLHCV    G P+PRPLGE +H     E++H+D+L++GAS      +M      Y+LV+ DD S YVW     + TA
Sbjct: 1279 IWIPAEAGSLQLRICIVGHFGVAGHRGLDTTLGAISKRFWWTDLATDVEYFVRRCLHCVSVVGGPPIPRPLGEAMHAERPNELIHWDYLYMGAST---SDDM------YILVIKDDASKYVWFFAVPDATA 1400          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.810e-22
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 0
Query:  225 MEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRG-GCPYLLVLLDDVSSYVWLEPALECTA 312
            M+ +V EF+++CLHC+DS+SG  VPRP GE +HG   GEVLHFD+LH+G S PL    +    G  YLLV++DD+S++ W+EP   CTA
Sbjct:    1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTA 89          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6H5J9M0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9M0_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 6.720e-22
Identity = 44/89 (49.44%), Postives = 65/89 (73.03%), Query Frame = 0
Query:  225 MEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIR-GGCPYLLVLLDDVSSYVWLEPALECTA 312
            ME +V +F++ CL+C+DS++G  VP+PLGE  HGT  GEV+ FD+L++GAS  L +  +    G  Y+LV++DD+S++VWLEP   CTA
Sbjct:    1 MEEHVTDFVKHCLNCMDSKAGEKVPQPLGETAHGTRPGEVVLFDYLYVGASGLLGKDSLDEEDGFKYILVMMDDMSNWVWLEPTGACTA 89          
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Match: A0A6A3N928_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N928_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.020e-22
Identity = 74/232 (31.90%), Postives = 105/232 (45.26%), Query Frame = 0
Query:  109 KDGWSVLMFSDASDLFWGSFLTQV----PTAQLPGKDVVQDGQDATAQGQPTVVTKVGDAM---------------RGADGLYRVTLRGV---------PVLWTPRNEHALQARLMVCAHMQKAGHRGVDATINRLSAYCVWDGMEANVVEFIRRCLHCVDSRSGSPVPRPLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRGGCPYLLVLLDDVSSYVWLEPALECTA 312
            K  W  L+  +  +LF  SFLT +    PT  L G      G D+ A  Q  V     + +               +  +GL ++ LRGV           +  P    +LQ R+ +  H   AGHRG+D T+  +S    W  +  +V  F+RRCLHCV    G P+PRPLGE +H     E++H+D+L +GAS              Y+LV+ DD S YVW     + TA
Sbjct:  518 KGYWHFLLSLECQELF--SFLTDMGIFTPTRVLMG------GSDSVAYCQAPVQEMFEEFLYNGLLIWLDGLIGYAKSEEGLLKL-LRGVLKGIVRLDAGPIGIPAEAGSLQLRICIVGHFGVAGHRGLDTTLGAISKRFWWTDLATDVEYFVRRCLHCVSVVGGPPIPRPLGEAMHAERPNELIHWDYLFMGAS---------TSDDKYILVIKDDASKYVWFFVVPDATA 731          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29074.7927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE6.140e-7736.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE7.490e-7233.19Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE1.000e-5931.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L028_9PHAE4.490e-4438.34CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K9E0_9PHAE6.000e-2850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R7Q542_CHOCR7.960e-2540.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2P4WY00_9STRA5.130e-2339.69Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6H5JVS6_9PHAE3.810e-2252.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9M0_9PHAE6.720e-2249.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3N928_9STRA9.020e-2231.90Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.70coord: 164..243
e-value: 3.9E-9
score: 38.6
NoneNo IPR availableGENE3D3.30.70.270coord: 21..105
e-value: 7.6E-9
score: 37.6
NoneNo IPR availableGENE3D3.10.20.370coord: 106..133
e-value: 7.6E-9
score: 37.6
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 5..133
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 189..240
e-value: 4.8E-11
score: 42.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29074contigH-paniculata_contig29074:1682..3035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29074.7927.1mRNA_H-paniculata_contig29074.7927.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29074 1682..3035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29074.7927.1 ID=prot_H-paniculata_contig29074.7927.1|Name=mRNA_H-paniculata_contig29074.7927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp
CDKIYSGTGVKHDPERIRCLVEMRRPESVGDLMRFLQAVNWMRIALPALE
PTIAPLRELMEIHMRGTSRTKRVAVRKIITAEEWTGKRRAAWGDVRDRLV
KAAALHHRKDGWSVLMFSDASDLFWGSFLTQVPTAQLPGKDVVQDGQDAT
AQGQPTVVTKVGDAMRGADGLYRVTLRGVPVLWTPRNEHALQARLMVCAH
MQKAGHRGVDATINRLSAYCVWDGMEANVVEFIRRCLHCVDSRSGSPVPR
PLGELLHGTEVGEVLHFDFLHLGASDPLKEHEMIRGGCPYLLVLLDDVSS
YVWLEPALECTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2