prot_H-paniculata_contig2906.7922.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2906.7922.1
Unique Nameprot_H-paniculata_contig2906.7922.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: D7G2C5_ECTSI (Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C5_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 4.550e-81
Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 0
Query:    1 MAEDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            MAEDG NPKAYPL+G DLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPV++CSVTTNEASQLKSQI TLKDQIEQLLI
Sbjct:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A835Z1Z7_9STRA (Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z7_9STRA)

HSP 1 Score: 231 bits (588), Expect = 2.350e-76
Identity = 116/125 (92.80%), Postives = 121/125 (96.80%), Query Frame = 0
Query:    4 DGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            D  NPKAYPL+GADLTVTILDL+QQA+NYKQLKKGANEATKTLNRGISEFIVMAADA+PLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIS SVTTNEASQLK QIQ+LKDQIEQLLI
Sbjct:    3 DEINPKAYPLAGADLTVTILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADADPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISASVTTNEASQLKEQIQSLKDQIEQLLI 127          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A7S2FW40_9STRA (Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2FW40_9STRA)

HSP 1 Score: 223 bits (567), Expect = 3.620e-73
Identity = 112/128 (87.50%), Postives = 120/128 (93.75%), Query Frame = 0
Query:    1 MAEDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            MAE   NPKAYPL+ A++TV ILDL+QQA NYKQLKKGANEATKTLNRGISEF+V+AADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVT+NEASQLK QIQT+KD IEQLLI
Sbjct:    1 MAE--VNPKAYPLADAEMTVKILDLVQQACNYKQLKKGANEATKTLNRGISEFVVLAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTSNEASQLKDQIQTMKDNIEQLLI 126          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A7S1CD40_9STRA (Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD40_9STRA)

HSP 1 Score: 217 bits (553), Expect = 5.820e-71
Identity = 107/126 (84.92%), Postives = 116/126 (92.06%), Query Frame = 0
Query:    3 EDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            +DG NPKA+PL+ A+L V ILDLIQQASNYKQLKKGANEATKTLNRGISE IV+ ADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI+CS+TTNE SQLK QI T+KD IE+LLI
Sbjct:    6 KDGVNPKAFPLADAELVVKILDLIQQASNYKQLKKGANEATKTLNRGISELIVLTADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIACSITTNEGSQLKPQINTMKDAIERLLI 131          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A7S2XVU5_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVU5_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.550e-71
Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0
Query:    3 EDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            E   NPKAYPL+G +LTV+I DL QQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSK+ALGRACGVSRPVI+ S+TTNEASQLK QIQ  KD IEQLLI
Sbjct:    7 ELATNPKAYPLAGPELTVSIYDLTQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKIALGRACGVSRPVIAASITTNEASQLKEQIQRTKDAIEQLLI 132          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A804K312_MUSAM (Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A804K312_MUSAM)

HSP 1 Score: 216 bits (550), Expect = 1.510e-70
Identity = 107/128 (83.59%), Postives = 117/128 (91.41%), Query Frame = 0
Query:    1 MAEDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M+ +  NPKAYPL+ A LT+TILDLIQQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQLKSQIQ LKD IE+LLI
Sbjct:    1 MSTEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: L1I7R9_GUITC (Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 RepID=L1I7R9_GUITC)

HSP 1 Score: 216 bits (549), Expect = 2.010e-70
Identity = 108/122 (88.52%), Postives = 115/122 (94.26%), Query Frame = 0
Query:    7 NPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            NPKA+PL+  DL+VTIL+L+QQASNYKQLKKGANEATKTLNRGISEFIVMAAD EPLEILLHLPLLCEDKNVPYVFVPSK ALGRACGVSRPVI+ SVTTNE SQLK QIQTLKDQIE+LLI
Sbjct:    5 NPKAFPLAPPDLSVTILELVQQASNYKQLKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRPVIAASVTTNEGSQLKGQIQTLKDQIEKLLI 126          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A7J7GND5_CAMSI (Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GND5_CAMSI)

HSP 1 Score: 216 bits (549), Expect = 2.150e-70
Identity = 106/128 (82.81%), Postives = 117/128 (91.41%), Query Frame = 0
Query:    1 MAEDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  +  NPKAYPL+ + LT+TILDL+QQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NEASQLKSQIQ LKD IE+LLI
Sbjct:    1 MTAEAVNPKAYPLADSQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A6A3D174_HIBSY (Ribonucloprotein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6A3D174_HIBSY)

HSP 1 Score: 216 bits (549), Expect = 2.290e-70
Identity = 108/128 (84.38%), Postives = 115/128 (89.84%), Query Frame = 0
Query:    1 MAEDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  +  NPKAYPL+ A LT TILDL+QQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVISCSVTTNE SQLKSQIQ LKD IE+LLI
Sbjct:    3 MTGEPVNPKAYPLADAQLTTTILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKKALGRACGVTRPVISCSVTTNEGSQLKSQIQQLKDAIEKLLI 130          
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Match: A0A1D1XNP3_9ARAE (Ribonucloprotein (Fragment) n=4 Tax=Liliopsida TaxID=4447 RepID=A0A1D1XNP3_9ARAE)

HSP 1 Score: 216 bits (549), Expect = 4.740e-70
Identity = 105/128 (82.03%), Postives = 117/128 (91.41%), Query Frame = 0
Query:    1 MAEDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M ++  NPKAYPL+ A LT+TILDLIQQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EP+EILLHLPLL EDKNVPYVF+PSK ALGRACGV+RPVI+CSVT+NE SQLKSQIQ LKD IE+LLI
Sbjct:   25 MTQEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPIEILLHLPLLAEDKNVPYVFIPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 152          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2906.7922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C5_ECTSI4.550e-8195.31Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A835Z1Z7_9STRA2.350e-7692.80Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S2FW40_9STRA3.620e-7387.50Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 ... [more]
A0A7S1CD40_9STRA5.820e-7184.92Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 T... [more]
A0A7S2XVU5_9STRA8.550e-7186.51Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID... [more]
A0A804K312_MUSAM1.510e-7083.59Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A... [more]
L1I7R9_GUITC2.010e-7088.52Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 ... [more]
A0A7J7GND5_CAMSI2.150e-7082.81Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4... [more]
A0A6A3D174_HIBSY2.290e-7084.38Ribonucloprotein n=2 Tax=Mesangiospermae TaxID=143... [more]
A0A1D1XNP3_9ARAE4.740e-7082.03Ribonucloprotein (Fragment) n=4 Tax=Liliopsida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..128
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..128
NoneNo IPR availablePANTHERPTHR23105:SF117coord: 1..128
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 80..94
score: 50.61
coord: 35..49
score: 47.88
coord: 54..67
score: 44.48
coord: 70..80
score: 66.53
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryotePRINTSPR00883NUCLEARHMGcoord: 38..48
score: 87.27
coord: 82..94
score: 81.54
coord: 8..21
score: 50.0
coord: 21..36
score: 60.0
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..128
e-value: 8.9E-52
score: 176.1
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 7..126
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 23..111
e-value: 8.8E-27
score: 92.7
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 73..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2906contigH-paniculata_contig2906:11298..13494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2906.7922.1mRNA_H-paniculata_contig2906.7922.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2906 10737..13494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2906.7922.1 ID=prot_H-paniculata_contig2906.7922.1|Name=mRNA_H-paniculata_contig2906.7922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
MAEDGANPKAYPLSGADLTVTILDLIQQASNYKQLKKGANEATKTLNRGI
SEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI
SCSVTTNEASQLKSQIQTLKDQIEQLLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR002415H/ACA_rnp_Nhp2_euk
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR004037Ribosomal_L7Ae_CS