mRNA_H-paniculata_contig2906.7921.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE) HSP 1 Score: 377 bits (969), Expect = 2.820e-122 Identity = 180/257 (70.04%), Postives = 206/257 (80.16%), Query Frame = 3
Query: 282 TDAGDFPASYRPTRLWWTKSRAEEDATINLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAVGWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAAEQARLVGEAAE 1052
T A P Y P+ LWWTK+R EE+ +NL ANAGF+ VALF + +F V+S+VSRGWT E ILRVP+DNW Y+E LR +PV VKACTSGIVYALGD AQ+ EG LA+I+R RV RS++AGLLLHGP+SHVWY VCEG+FD VGWNE WWV PKIITDQ+LWGP WNAVYI FLGVL +DS A IWEAITSTA+PLV+AG+RLWPLAHV+TYGLVP ENRLLWVD VEI+WVTILS QAAEQAR E E
Sbjct: 85 TKASTPPKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPAEQEE 341
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA) HSP 1 Score: 335 bits (859), Expect = 3.400e-106 Identity = 149/249 (59.84%), Postives = 194/249 (77.91%), Query Frame = 3
Query: 285 DAGDFPASYRPTRLWWTKSRAEEDATINLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAVGWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAAEQAR 1031
+AG + A Y+P LWW KS EED +N + N+GF+IAV + V L + D SRGWTA+E++LR+P DNW Y + LR +PVLVKA TSG VYALGDWTAQT+ G LA++ R RV RS+ AG + HGP+SH WY VCE +F A+GWN WWVT+PKI+TDQ++WGP WNA Y++ +G++KRD+ A +WEA+TST VPLVV+GL+LWP H++TYGL+P ENRLLWVD VEI+WVTILS+QAA++A+
Sbjct: 34 EAGGWSA-YKPKLLWWCKSEMEEDREVNFLVNSGFLIAVIVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAADEAK 281
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA) HSP 1 Score: 270 bits (690), Expect = 1.030e-79 Identity = 133/263 (50.57%), Postives = 168/263 (63.88%), Query Frame = 3
Query: 285 DAGDFPASYRPTRLWWTKSRAEEDATINLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAVGWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAA----EQARLVGEAAELEA 1061
DA D P S + + ++ + +N + N G I AVA L + TVD DV RGWT E+ R+P+DNW Y L +PV VKA TSG VY LGD AQ EG L +I RGRV RS IAG + HGP+SH WYGV E F +GW E WW T PKI DQ++W P WN YI LG +KR+++ I + ST+ L+ +GL+LWPLAHV+TYG++P ENRLLWVD VEI+WVTILSR+AA E+A +G+ A EA
Sbjct: 97 DAADTPRSLQERVRLFAATKGVDSRQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGW-EGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAANADAEKAEAIGDVAVEEA 358
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC) HSP 1 Score: 254 bits (649), Expect = 1.960e-76 Identity = 112/215 (52.09%), Postives = 150/215 (69.77%), Query Frame = 3
Query: 378 NAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAVGWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAAE 1022
N GFI+ V L + T+D+ +SRGWT++EL R+P+D W Y++ L ++PV KA TS VY +GD+ AQ ++G A+ D+ RGR+ RS +AGL+ HGP+SH WY VC+ FD V WW PK++ DQ WGP WN YIL LG++K + + IW + T VPL+++GL+LWPLAH +TYGLVP ENRLLWVD VEI+WVTIL+ AAE
Sbjct: 3 NTGFIVGVVGVLLYEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAE 217
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.230e-75 Identity = 118/219 (53.88%), Postives = 154/219 (70.32%), Query Frame = 3
Query: 363 INLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAVGWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAA 1019
IN N G I+ VAL L + TVD D+ RGWTA E + R+ +DNW Y+E L P+ KA TS VYA+GD AQ +EG+++ ++ R R RS +AGL+ HGP+SHVWY V E +F A+ WNE WW PK++ DQ+ WGPFWN +YI+ LG++K +S +W I T VPL+V+GL+LWPLAH +TYGL+P ENRLLWVD VEI WVTIL+ QA+
Sbjct: 106 INETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQAS 323
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA) HSP 1 Score: 244 bits (623), Expect = 4.380e-71 Identity = 115/220 (52.27%), Postives = 148/220 (67.27%), Query Frame = 3
Query: 363 INLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAV-GWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAA 1019
IN N +IAV + L + +VD+ ++RGWT +E+ R+P+DNW +Y+ L D P+ KA TS VY +GD AQ +EG ++ D+ R R+ RS +AGL+ HGP+SH WY E FD V W E WW PK+I DQ WGPFWN YI+ LG +K D IW I T +PLVV+GL+LWPLAH +TYGLVP ENRLLWVD VEI+WVTIL+ QA+
Sbjct: 98 INSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTE-WWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.270e-70 Identity = 110/219 (50.23%), Postives = 146/219 (66.67%), Query Frame = 3
Query: 363 INLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAVGWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAA 1019
IN N ++AV + + +VD+ ++RGWT +E+ R+PIDNW+ Y+ TL ++P+ KA TS VY +GD AQ +EG + ++ R R+ RS +AGL+ HGPMSH WY E FD V WW PK+ DQ WGP WN YIL LG++K DS IW + T +PL+V+GL+LWPLAH +TYGL+P ENRLLWVD VEIIWVTIL+ QA+
Sbjct: 97 INGFINTAVVVAVLTALVFKVTSVDAGLTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQAS 315
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA) HSP 1 Score: 241 bits (616), Expect = 2.740e-70 Identity = 116/220 (52.73%), Postives = 144/220 (65.45%), Query Frame = 3
Query: 366 NLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVF-DAVGWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAAE 1022
N N G I V + AL L TVD + RGWTA E+ +R+P+DNW +Y L P+ KA TS VY +GD AQ +EG + D+ R RV RS +AG + HGP+SHVWY E VF + W E WW PK+ DQ+ WGPFWN YIL LG+++ + IW I T VPL+V+GL+LWPLAH +TYGLVP ENRLLWVD VEI+WVTIL+ AAE
Sbjct: 88 NAYINIGVIAIVTVLALSKLATVDMGMMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAAE 306
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A0G4F6P0_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F6P0_VITBC) HSP 1 Score: 249 bits (636), Expect = 1.080e-68 Identity = 116/237 (48.95%), Postives = 161/237 (67.93%), Query Frame = 3
Query: 339 SRAEEDATINLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAV-GWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRDSIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAAEQARLVGEA 1046
++ EE+ +NL N F+ +A+ + VD + RGWT E+++R P+DN Y L D+PV+ K TSG+VYA+GDWTAQ +EG LA I R R+FRS+ AGLLLHGP+SHVWY + + F+AV W W T+ KI+TD+ ++ PFWNA Y+L+LG+L+ D + IW AI ++A+PLV+AGL+ WP ++TYGLVPT+ R+LWV FV I WVTI+S QA + EA
Sbjct: 423 TKREEERLVNLFFNLVFLTIMAVTTAQSFLRVDESIYRGWTTSEILMRAPLDNLNVYMRMLHDDPVVTKGLTSGVVYAIGDWTAQMNEGRGLAGIDRLRLFRSASAGLLLHGPLSHVWYHLNDLFFEAVLQWESYWPTTLGKIVTDRAVFAPFWNACYVLYLGILELDPLPVIWRAIKASAIPLVIAGLKFWPFVSLVTYGLVPTDLRVLWVGFVSIFWVTIISSQAQSAQKSQREA 659
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Match: A0A448Z6W8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6W8_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.510e-68 Identity = 113/222 (50.90%), Postives = 148/222 (66.67%), Query Frame = 3
Query: 366 NLVANAGFIIAVALFALVTLFTVDSDVSRGWTAQELILRVPIDNWLAYTETLRDNPVLVKACTSGIVYALGDWTAQTSEGIALADIKRGRVFRSSIAGLLLHGPMSHVWYGVCEGVFDAV-GWNENWWVTIPKIITDQILWGPFWNAVYILFLGVLKRD---SIAAIWEAITSTAVPLVVAGLRLWPLAHVITYGLVPTENRLLWVDFVEIIWVTILSRQAA 1019
N + N G ++A AL +L + TVD + RGW+ +E+ LR+P+DNW +Y+ L P+ KA TS VYA+GD+ AQ +EG + ++ R R+ RS +AGLL HGPMSH WY E VF + N+W T KI DQ +WGPFWN YIL LGV+K S +IW + T +PL+V+GL+LWPLAH +TYGL+P ENRLLWVD VEI WVTIL+ AA
Sbjct: 53 NAILNTGVVVAFALLSLNQMATVDVGMMRGWSLEEIALRIPLDNWNSYSAVLSKAPIPTKAATSATVYAIGDFIAQRAEGRTMGELDRPRLARSLLAGLLGHGPMSHFWYEASENVFQNILHLPSNFWGTAAKIGIDQTIWGPFWNNTYILMLGVMKNGRETSFESIWAEMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIXWVTILATTAA 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2906.7921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2906.7921.1 >prot_H-paniculata_contig2906.7921.1 ID=prot_H-paniculata_contig2906.7921.1|Name=mRNA_H-paniculata_contig2906.7921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=397bp MAGRRVVGPCLALIVVGQSFHLPVDPVTSKWMRRAPQPVFSGRPTPSYMTback to top mRNA from alignment at H-paniculata_contig2906:2472..10740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2906.7921.1 ID=mRNA_H-paniculata_contig2906.7921.1|Name=mRNA_H-paniculata_contig2906.7921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8269bp|location=Sequence derived from alignment at H-paniculata_contig2906:2472..10740+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2906:2472..10740+ >mRNA_H-paniculata_contig2906.7921.1 ID=mRNA_H-paniculata_contig2906.7921.1|Name=mRNA_H-paniculata_contig2906.7921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2382bp|location=Sequence derived from alignment at H-paniculata_contig2906:2472..10740+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |